© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1122 |
| Gene name | |
| Location | Contig_1237:156..737 |
| Strand | - |
| Gene length (bp) | 581 |
| Transcript length (bp) | 441 |
| Coding sequence length (bp) | 441 |
| Protein length (aa) | 147 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.1687 | 0.9027 | 0.1985 | 0.0236 | 0.036 | 0.0454 | 0.0283 | 0.0071 | 0.0902 | 0.0012 |
| Orthofinder run ID | 4 |
| Orthogroup | 1529 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1122 MFAVPGWSVSADSLAAEKAAPAKASADAKSRKRKRAGGSADVSASNVADLYESVVEGRKKAPQKKASKRSDGGAK RERKPAGAEAKATKSERQHAGKKAAEESTSAQGQRDGHAASSSSACGGGEAHAAPGLDAGEARVGALPPPE* |
| Coding | >Hirsu2|1122 ATGTTTGCTGTGCCGGGCTGGTCGGTCTCCGCCGACAGCCTCGCGGCCGAAAAGGCGGCGCCGGCCAAGGCGTCG GCCGACGCAAAGTCGAGGAAGCGGAAGAGGGCCGGCGGGTCGGCCGACGTCAGCGCCTCCAACGTCGCCGACCTC TACGAGTCCGTCGTCGAGGGCCGGAAGAAGGCGCCGCAGAAGAAGGCGAGCAAGCGGTCCGACGGCGGCGCGAAG CGGGAGCGCAAGCCCGCCGGAGCAGAGGCCAAGGCCACCAAGAGCGAGCGACAGCACGCCGGGAAGAAAGCAGCC GAAGAGAGCACCAGCGCCCAAGGCCAGCGGGACGGCCATGCCGCCTCCTCCTCCTCCGCCTGCGGCGGCGGCGAA GCTCACGCCGCTCCAGGCCTCGATGCGGGAGAAGCTCGTGTCGGCGCGCTTCCGCCACCTGAATGA |
| Transcript | >Hirsu2|1122 ATGTTTGCTGTGCCGGGCTGGTCGGTCTCCGCCGACAGCCTCGCGGCCGAAAAGGCGGCGCCGGCCAAGGCGTCG GCCGACGCAAAGTCGAGGAAGCGGAAGAGGGCCGGCGGGTCGGCCGACGTCAGCGCCTCCAACGTCGCCGACCTC TACGAGTCCGTCGTCGAGGGCCGGAAGAAGGCGCCGCAGAAGAAGGCGAGCAAGCGGTCCGACGGCGGCGCGAAG CGGGAGCGCAAGCCCGCCGGAGCAGAGGCCAAGGCCACCAAGAGCGAGCGACAGCACGCCGGGAAGAAAGCAGCC GAAGAGAGCACCAGCGCCCAAGGCCAGCGGGACGGCCATGCCGCCTCCTCCTCCTCCGCCTGCGGCGGCGGCGAA GCTCACGCCGCTCCAGGCCTCGATGCGGGAGAAGCTCGTGTCGGCGCGCTTCCGCCACCTGAATGA |
| Gene | >Hirsu2|1122 ATGTTTGCTGTGCCGGGCTGGTCGGTCTCCGCCGACAGCCTCGCGGCCGAAAAGGCGGCGCCGGCCAAGGCGTCG GCCGACGCAAAGTCGAGGAAGCGGAAGAGGGCCGGCGGGTCGGCCGACGTCAGCGCCTCCAACGTCGCCGACCTC TACGAGTCCGTCGTCGAGGGCCGGAAGAAGGCGCCGCAGAAGAAGGCGAGCAAGCGGTCCGACGGCGGCGCGAAG CGGGAGCGCAAGCCCGCCGGAGCAGAGGCCAAGGCCACCAAGAGCGAGCGACAGCACGCCGGGAAGAAAGGTCGC GCCGGGCCCGACGAGGCTGCGACCGAGGGGACGGACGCCAAGCCGAAGCCGGAGGAGCATGGCGATGATGACGGG CGGCGGCGGCGGCGGCGGCGGCCCCAACAAGACGTCGCGACCGCCGACGACGGCGGGCAGCAGCCGAAGAGAGCA CCAGCGCCCAAGGCCAGCGGGACGGCCATGCCGCCTCCTCCTCCTCCGCCTGCGGCGGCGGCGAAGCTCACGCCG CTCCAGGCCTCGATGCGGGAGAAGCTCGTGTCGGCGCGCTTCCGCCACCTGAATGA |