Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11212
Gene name
LocationContig_987:7041..8027
Strand-
Gene length (bp)986
Transcript length (bp)591
Coding sequence length (bp)591
Protein length (aa) 197

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.3521 0.3169 0.735 0.1757 0.2832 0.0101 0.2525 0.216 0.2805 0.0961

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999725

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8705
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|11212 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11212
MQAGRLLLLLLLLESQARAEDGDDKGRRPDSERVLRRVLEPAGLGLACCPGARPPAAAQGWPQAAWPGWQWDAVG
GQPCPADRPQRGARAPPPARTPSITDDISPSTNKLRLENINSPLPASPASASPPPPPPPPLPLLSPRLSSNPLSL
SRRDTQQAARASRPSLCRLFLTPPLSVVDVQKLVLVALPPRPRRSR*
Coding >Hirsu2|11212
ATGCAGGCCGGCCGGCTGCTGCTGCTGCTGCTGCTGCTGGAGAGCCAAGCTCGAGCCGAGGACGGTGACGACAAA
GGACGGCGGCCCGACAGCGAGCGAGTCCTACGCCGAGTCCTAGAACCGGCTGGGCTGGGCCTGGCCTGTTGCCCT
GGGGCGCGCCCGCCGGCCGCTGCGCAGGGCTGGCCCCAGGCGGCATGGCCGGGCTGGCAGTGGGACGCTGTAGGC
GGCCAGCCTTGCCCTGCCGACAGGCCACAGCGAGGTGCCAGAGCTCCCCCTCCGGCCCGCACCCCCTCCATCACT
GACGACATCTCGCCCAGCACCAACAAACTCCGACTCGAAAACATCAACTCGCCTTTGCCTGCTTCGCCCGCCTCC
GCCTCTCCTCCTCCTCCTCCTCCTCCCCCCCTCCCCCTTCTCTCGCCTCGCCTCTCCTCCAATCCGCTCTCTCTC
TCTCGCAGAGACACGCAGCAGGCCGCCCGCGCTTCTCGGCCCTCGCTCTGCCGCCTCTTCCTCACCCCGCCTCTC
TCTGTCGTCGACGTCCAGAAGCTCGTCCTCGTCGCCCTCCCGCCGCGCCCACGTCGCAGTCGGTGA
Transcript >Hirsu2|11212
ATGCAGGCCGGCCGGCTGCTGCTGCTGCTGCTGCTGCTGGAGAGCCAAGCTCGAGCCGAGGACGGTGACGACAAA
GGACGGCGGCCCGACAGCGAGCGAGTCCTACGCCGAGTCCTAGAACCGGCTGGGCTGGGCCTGGCCTGTTGCCCT
GGGGCGCGCCCGCCGGCCGCTGCGCAGGGCTGGCCCCAGGCGGCATGGCCGGGCTGGCAGTGGGACGCTGTAGGC
GGCCAGCCTTGCCCTGCCGACAGGCCACAGCGAGGTGCCAGAGCTCCCCCTCCGGCCCGCACCCCCTCCATCACT
GACGACATCTCGCCCAGCACCAACAAACTCCGACTCGAAAACATCAACTCGCCTTTGCCTGCTTCGCCCGCCTCC
GCCTCTCCTCCTCCTCCTCCTCCTCCCCCCCTCCCCCTTCTCTCGCCTCGCCTCTCCTCCAATCCGCTCTCTCTC
TCTCGCAGAGACACGCAGCAGGCCGCCCGCGCTTCTCGGCCCTCGCTCTGCCGCCTCTTCCTCACCCCGCCTCTC
TCTGTCGTCGACGTCCAGAAGCTCGTCCTCGTCGCCCTCCCGCCGCGCCCACGTCGCAGTCGGTGA
Gene >Hirsu2|11212
ATGCAGGCCGGCCGGCTGCTGCTGCTGCTGCTGCTGCTGGAGAGCCAAGCTCGAGCCGAGGACGGTGACGACAAA
GGACGGCGGCCCGGTTCGTGATGCCTTCGAGGAAGGGCGGCGGCGGCCACGTGCCGCGCTGGGCGGCTGTCCCTC
TACTGAAATGGGGCCGCCCCCGCGCAAGTCCCCACTGAAAAGTTAGGGGGCACGGGCAGGCGGCCGTTGCGCTGT
GAGTCCCCTCCAGCGGCCAGGCCGCGCCGCCCCAGCGCTCACCTCCACTGTCAGGCTGCTGCTGCATTCTGGGCG
CGGCGTCGTGAGGAAAAAGAGAGCACGCTGTAGGAACAGGTCGCGGTCAGGGTCGGGACGCCTTGCCAGGGTCCG
GCGTCGCACACGGAGGTGAAGGAGATGCCGATGGGCATCACCAGCAACAAATCAAACAATCTTGCGTGACCTCGC
TCACCACCCGTCCAGATGCGTAGCCCCGTGCAGACAGCGAGCGAGTCCTACGCCGAGTCCTAGAACCGGCTGGGC
TGGGCCTGGCCTGTTGCCCTGGGGCGCGCCCGCCGGCCGCTGCGCAGGGCTGGCCCCAGGCGGCATGGCCGGGCT
GGCAGTGGGACGCTGTAGGCGGCCAGCCTTGCCCTGCCGACAGGCCACAGCGAGGTGCCAGAGCTCCCCCTCCGG
CCCGCACCCCCTCCATCACTGACGACATCTCGCCCAGCACCAACAAACTCCGACTCGAAAACATCAACTCGCCTT
TGCCTGCTTCGCCCGCCTCCGCCTCTCCTCCTCCTCCTCCTCCTCCCCCCCTCCCCCTTCTCTCGCCTCGCCTCT
CCTCCAATCCGCTCTCTCTCTCTCGCAGAGACACGCAGCAGGCCGCCCGCGCTTCTCGGCCCTCGCTCTGCCGCC
TCTTCCTCACCCCGCCTCTCTCTGTCGTCGACGTCCAGAAGCTCGTCCTCGTCGCCCTCCCGCCGCGCCCACGTC
GCAGTCGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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