© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|11208 |
| Gene name | |
| Location | Contig_986:1902..4260 |
| Strand | - |
| Gene length (bp) | 2358 |
| Transcript length (bp) | 2277 |
| Coding sequence length (bp) | 2277 |
| Protein length (aa) | 759 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 3.0E-148 | 58 | 715 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 37 | 758 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 35 | 758 | 1.0E-170 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 38 | 758 | 7.0E-141 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 27 | 728 | 5.0E-134 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 37 | 750 | 3.0E-130 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 37 | 758 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 35 | 758 | 1.0E-170 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 38 | 758 | 7.0E-141 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 27 | 728 | 5.0E-134 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 37 | 750 | 3.0E-130 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 37 | 728 | 5.0E-130 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 37 | 729 | 8.0E-124 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 31 | 729 | 5.0E-122 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 24 | 730 | 7.0E-120 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 39 | 729 | 3.0E-119 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 27 | 747 | 3.0E-117 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 42 | 740 | 1.0E-111 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 32 | 745 | 4.0E-104 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 6 | 738 | 1.0E-90 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 86 | 105 | 19 |
| 3 | 135 | 157 | 22 |
| 4 | 167 | 189 | 22 |
| 5 | 245 | 267 | 22 |
| 6 | 277 | 299 | 22 |
| 7 | 312 | 334 | 22 |
| 8 | 387 | 409 | 22 |
| 9 | 442 | 459 | 17 |
| 10 | 463 | 480 | 17 |
| 11 | 485 | 507 | 22 |
| 12 | 511 | 533 | 22 |
| 13 | 619 | 636 | 17 |
| 14 | 656 | 678 | 22 |
| 15 | 699 | 721 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|11208 MGLTTWERLTTVKPRLPGLGRSWDAWDPDDDPPGAGEDSPYEEVRAAVRNTDGGEMANTLRAWILGLFFVTLGSG LHMFLGLRSPVINLSGIVVQLLAYPIGRLWAKVVPRHVFRWGSVEWSFNRGPFTIKEHVVVTLMTNITIGGAYST DALVALIGKPFYNHDPGWGFALGLTLTTQLMGIGLTGLFRRVLVWPAAMTWPRQFASTALFYALHDGGGPARLPL RPGWSISRYRWFAAVAGAMFCYHWLPAVLFRGLSVFAFVTWVRPASPVLNQLFGGFSGLSLLPITFDWTYVSAFL GNPLLAPTHAHVNTLVGLVIFIIITTAGIVYSGALYSQYLPMVTAQTYDNTQSYYNVSRVLVRDPYGNPLFSEKK YADYSPVFLPPALALNYGLSFAALTSAFVHIWINHGRDIWLRLRTGRKQKADVHLKLMRRYDEFSDLGYFLLFAG PFGVAWSLCQDRLPLWAFPISIILAVVFIIPVTMVLAVSNIVLGLNVLSPFIAGFIIPGKPFGVMMFNVFSTVLL LQAQTYSGDLKLAHYMKIPPRLTLSCQLVATFWSSVVQVAVMYWTLGHVDGICENTQPNNFTCPNGRAFFSSNVI WGIIGPSRMFGARGMYTQLNLFWVVGAALPVLLYVLTKVFKIRFFSHLQAPVILGAMAWLPPGTPLSYSTWAIVG LVFNYGIRRRFKSWWMAFNFTTAAALDCGLVLCTIVVFLAITLPGIKGPQWWGNTTVFQTLDATNRATLKTVAEG ETFGPKEW* |
| Coding | >Hirsu2|11208 ATGGGACTGACGACCTGGGAGAGGCTGACGACCGTGAAGCCACGGTTACCCGGCCTTGGTCGAAGCTGGGACGCC TGGGACCCGGACGATGACCCGCCCGGCGCCGGCGAGGACTCGCCGTACGAGGAGGTGCGGGCGGCGGTGCGCAAC ACGGACGGGGGCGAGATGGCCAACACGCTGCGGGCCTGGATCCTTGGCCTGTTCTTCGTCACTCTCGGCTCCGGC CTGCACATGTTTCTCGGCTTGAGGAGCCCGGTCATCAACCTCTCCGGCATCGTCGTCCAGCTGCTGGCCTACCCC ATCGGCCGGCTCTGGGCCAAGGTGGTCCCCCGGCACGTCTTCCGCTGGGGCTCGGTCGAATGGAGCTTCAACCGC GGGCCCTTCACCATCAAGGAGCACGTGGTGGTGACTCTGATGACCAACATCACCATCGGCGGCGCCTACAGCACC GACGCCCTCGTCGCCCTGATCGGCAAGCCCTTCTACAACCACGACCCGGGCTGGGGCTTCGCCTTGGGCCTGACC CTGACGACGCAGCTGATGGGCATCGGCCTGACCGGCCTCTTCCGCCGCGTGCTCGTCTGGCCGGCCGCCATGACC TGGCCGCGCCAGTTCGCCAGCACCGCCCTCTTCTACGCGCTGCACGACGGCGGCGGCCCGGCCCGCCTCCCGCTC CGGCCCGGCTGGTCCATCAGCCGCTACCGCTGGTTCGCGGCCGTGGCCGGCGCCATGTTCTGCTACCACTGGCTG CCGGCCGTCCTCTTCCGCGGCCTCTCCGTCTTCGCCTTCGTCACCTGGGTCCGGCCCGCCAGCCCCGTCCTCAAC CAGCTCTTCGGCGGCTTCTCCGGCCTCTCCCTGCTGCCCATCACCTTCGACTGGACCTACGTCTCGGCCTTCCTC GGCAACCCGCTGCTGGCGCCGACGCACGCCCACGTCAACACCCTGGTCGGCCTCGTCATCTTCATCATCATCACC ACCGCTGGCATTGTCTACTCCGGCGCCCTGTACTCCCAATATCTGCCCATGGTGACGGCCCAGACGTACGACAAC ACCCAGTCCTACTACAACGTCTCCCGGGTCCTCGTCCGGGACCCCTACGGCAACCCGCTCTTCAGCGAGAAGAAA TACGCCGACTACTCGCCTGTCTTCCTCCCGCCTGCCCTCGCCCTCAACTACGGCCTCTCCTTCGCAGCCCTGACC TCGGCCTTCGTCCACATCTGGATCAATCACGGGCGCGACATCTGGCTCCGCCTCCGCACCGGCCGCAAACAGAAA GCAGACGTCCACCTGAAGTTGATGCGCCGCTACGACGAGTTCTCCGATCTAGGCTACTTCTTGCTTTTCGCAGGC CCCTTCGGCGTCGCCTGGTCACTCTGTCAGGACCGCCTCCCGTTATGGGCGTTCCCCATCTCCATCATCCTTGCC GTCGTCTTCATCATCCCCGTCACCATGGTCCTGGCCGTCTCCAACATCGTGCTCGGCCTCAACGTCCTCTCGCCC TTCATCGCCGGCTTCATCATTCCGGGCAAGCCCTTCGGCGTCATGATGTTCAACGTCTTCAGCACTGTTCTCCTC CTGCAGGCCCAGACCTACAGCGGCGACCTCAAGCTGGCCCACTACATGAAGATCCCGCCCAGGCTTACCCTCTCC TGCCAGCTTGTCGCCACTTTTTGGTCCAGTGTCGTCCAGGTGGCCGTCATGTACTGGACCCTGGGCCACGTCGAC GGCATCTGCGAGAACACGCAGCCCAACAACTTCACCTGCCCCAATGGCCGGGCCTTTTTCTCCTCCAACGTCATT TGGGGCATCATCGGCCCGAGCCGCATGTTCGGCGCCCGCGGCATGTACACCCAGCTCAATCTCTTCTGGGTCGTC GGCGCCGCCCTGCCCGTACTGCTCTACGTCCTCACCAAGGTCTTCAAGATCCGCTTCTTCAGCCACTTACAGGCC CCCGTCATCCTCGGCGCCATGGCTTGGCTGCCTCCCGGCACGCCCCTTAGCTACTCGACCTGGGCCATCGTCGGC CTCGTCTTTAACTACGGGATCCGCCGCAGATTCAAGTCCTGGTGGATGGCTTTCAACTTCACCACCGCCGCCGCC CTCGACTGTGGCCTCGTCCTATGCACCATTGTCGTCTTCCTCGCCATCACTTTGCCGGGGATCAAGGGTCCGCAG TGGTGGGGGAACACGACTGTGTTCCAGACGCTCGATGCCACGAATCGCGCAACGCTGAAGACGGTGGCTGAGGGA GAGACCTTTGGACCGAAGGAATGGTAG |
| Transcript | >Hirsu2|11208 ATGGGACTGACGACCTGGGAGAGGCTGACGACCGTGAAGCCACGGTTACCCGGCCTTGGTCGAAGCTGGGACGCC TGGGACCCGGACGATGACCCGCCCGGCGCCGGCGAGGACTCGCCGTACGAGGAGGTGCGGGCGGCGGTGCGCAAC ACGGACGGGGGCGAGATGGCCAACACGCTGCGGGCCTGGATCCTTGGCCTGTTCTTCGTCACTCTCGGCTCCGGC CTGCACATGTTTCTCGGCTTGAGGAGCCCGGTCATCAACCTCTCCGGCATCGTCGTCCAGCTGCTGGCCTACCCC ATCGGCCGGCTCTGGGCCAAGGTGGTCCCCCGGCACGTCTTCCGCTGGGGCTCGGTCGAATGGAGCTTCAACCGC GGGCCCTTCACCATCAAGGAGCACGTGGTGGTGACTCTGATGACCAACATCACCATCGGCGGCGCCTACAGCACC GACGCCCTCGTCGCCCTGATCGGCAAGCCCTTCTACAACCACGACCCGGGCTGGGGCTTCGCCTTGGGCCTGACC CTGACGACGCAGCTGATGGGCATCGGCCTGACCGGCCTCTTCCGCCGCGTGCTCGTCTGGCCGGCCGCCATGACC TGGCCGCGCCAGTTCGCCAGCACCGCCCTCTTCTACGCGCTGCACGACGGCGGCGGCCCGGCCCGCCTCCCGCTC CGGCCCGGCTGGTCCATCAGCCGCTACCGCTGGTTCGCGGCCGTGGCCGGCGCCATGTTCTGCTACCACTGGCTG CCGGCCGTCCTCTTCCGCGGCCTCTCCGTCTTCGCCTTCGTCACCTGGGTCCGGCCCGCCAGCCCCGTCCTCAAC CAGCTCTTCGGCGGCTTCTCCGGCCTCTCCCTGCTGCCCATCACCTTCGACTGGACCTACGTCTCGGCCTTCCTC GGCAACCCGCTGCTGGCGCCGACGCACGCCCACGTCAACACCCTGGTCGGCCTCGTCATCTTCATCATCATCACC ACCGCTGGCATTGTCTACTCCGGCGCCCTGTACTCCCAATATCTGCCCATGGTGACGGCCCAGACGTACGACAAC ACCCAGTCCTACTACAACGTCTCCCGGGTCCTCGTCCGGGACCCCTACGGCAACCCGCTCTTCAGCGAGAAGAAA TACGCCGACTACTCGCCTGTCTTCCTCCCGCCTGCCCTCGCCCTCAACTACGGCCTCTCCTTCGCAGCCCTGACC TCGGCCTTCGTCCACATCTGGATCAATCACGGGCGCGACATCTGGCTCCGCCTCCGCACCGGCCGCAAACAGAAA GCAGACGTCCACCTGAAGTTGATGCGCCGCTACGACGAGTTCTCCGATCTAGGCTACTTCTTGCTTTTCGCAGGC CCCTTCGGCGTCGCCTGGTCACTCTGTCAGGACCGCCTCCCGTTATGGGCGTTCCCCATCTCCATCATCCTTGCC GTCGTCTTCATCATCCCCGTCACCATGGTCCTGGCCGTCTCCAACATCGTGCTCGGCCTCAACGTCCTCTCGCCC TTCATCGCCGGCTTCATCATTCCGGGCAAGCCCTTCGGCGTCATGATGTTCAACGTCTTCAGCACTGTTCTCCTC CTGCAGGCCCAGACCTACAGCGGCGACCTCAAGCTGGCCCACTACATGAAGATCCCGCCCAGGCTTACCCTCTCC TGCCAGCTTGTCGCCACTTTTTGGTCCAGTGTCGTCCAGGTGGCCGTCATGTACTGGACCCTGGGCCACGTCGAC GGCATCTGCGAGAACACGCAGCCCAACAACTTCACCTGCCCCAATGGCCGGGCCTTTTTCTCCTCCAACGTCATT TGGGGCATCATCGGCCCGAGCCGCATGTTCGGCGCCCGCGGCATGTACACCCAGCTCAATCTCTTCTGGGTCGTC GGCGCCGCCCTGCCCGTACTGCTCTACGTCCTCACCAAGGTCTTCAAGATCCGCTTCTTCAGCCACTTACAGGCC CCCGTCATCCTCGGCGCCATGGCTTGGCTGCCTCCCGGCACGCCCCTTAGCTACTCGACCTGGGCCATCGTCGGC CTCGTCTTTAACTACGGGATCCGCCGCAGATTCAAGTCCTGGTGGATGGCTTTCAACTTCACCACCGCCGCCGCC CTCGACTGTGGCCTCGTCCTATGCACCATTGTCGTCTTCCTCGCCATCACTTTGCCGGGGATCAAGGGTCCGCAG TGGTGGGGGAACACGACTGTGTTCCAGACGCTCGATGCCACGAATCGCGCAACGCTGAAGACGGTGGCTGAGGGA GAGACCTTTGGACCGAAGGAATGGTAG |
| Gene | >Hirsu2|11208 ATGGGACTGACGACCTGGGAGAGGCTGACGACCGTGAAGCCACGGTTACCCGGCCTTGGTCGAAGCTGGGACGCC TGGGACCCGGACGATGACCCGCCCGGCGCCGGCGAGGACTCGCCGTACGAGGAGGTGCGGGCGGCGGTGCGCAAC ACGGACGGGGGCGAGATGGCCAACACGCTGCGGGCCTGGATCCTTGGCCTGTTCTTCGTCACTCTCGGCTCCGGC CTGCACATGTTTCTCGGCTTGAGGTGAGTTCGCGCGACAGGGGAAGAGGTGATATGAGATTGGTTTGAGTGAGGC AGGGCGGAGGCTCACGTTCTCGAGCGCAGGAGCCCGGTCATCAACCTCTCCGGCATCGTCGTCCAGCTGCTGGCC TACCCCATCGGCCGGCTCTGGGCCAAGGTGGTCCCCCGGCACGTCTTCCGCTGGGGCTCGGTCGAATGGAGCTTC AACCGCGGGCCCTTCACCATCAAGGAGCACGTGGTGGTGACTCTGATGACCAACATCACCATCGGCGGCGCCTAC AGCACCGACGCCCTCGTCGCCCTGATCGGCAAGCCCTTCTACAACCACGACCCGGGCTGGGGCTTCGCCTTGGGC CTGACCCTGACGACGCAGCTGATGGGCATCGGCCTGACCGGCCTCTTCCGCCGCGTGCTCGTCTGGCCGGCCGCC ATGACCTGGCCGCGCCAGTTCGCCAGCACCGCCCTCTTCTACGCGCTGCACGACGGCGGCGGCCCGGCCCGCCTC CCGCTCCGGCCCGGCTGGTCCATCAGCCGCTACCGCTGGTTCGCGGCCGTGGCCGGCGCCATGTTCTGCTACCAC TGGCTGCCGGCCGTCCTCTTCCGCGGCCTCTCCGTCTTCGCCTTCGTCACCTGGGTCCGGCCCGCCAGCCCCGTC CTCAACCAGCTCTTCGGCGGCTTCTCCGGCCTCTCCCTGCTGCCCATCACCTTCGACTGGACCTACGTCTCGGCC TTCCTCGGCAACCCGCTGCTGGCGCCGACGCACGCCCACGTCAACACCCTGGTCGGCCTCGTCATCTTCATCATC ATCACCACCGCTGGCATTGTCTACTCCGGCGCCCTGTACTCCCAATATCTGCCCATGGTGACGGCCCAGACGTAC GACAACACCCAGTCCTACTACAACGTCTCCCGGGTCCTCGTCCGGGACCCCTACGGCAACCCGCTCTTCAGCGAG AAGAAATACGCCGACTACTCGCCTGTCTTCCTCCCGCCTGCCCTCGCCCTCAACTACGGCCTCTCCTTCGCAGCC CTGACCTCGGCCTTCGTCCACATCTGGATCAATCACGGGCGCGACATCTGGCTCCGCCTCCGCACCGGCCGCAAA CAGAAAGCAGACGTCCACCTGAAGTTGATGCGCCGCTACGACGAGTTCTCCGATCTAGGCTACTTCTTGCTTTTC GCAGGCCCCTTCGGCGTCGCCTGGTCACTCTGTCAGGACCGCCTCCCGTTATGGGCGTTCCCCATCTCCATCATC CTTGCCGTCGTCTTCATCATCCCCGTCACCATGGTCCTGGCCGTCTCCAACATCGTGCTCGGCCTCAACGTCCTC TCGCCCTTCATCGCCGGCTTCATCATTCCGGGCAAGCCCTTCGGCGTCATGATGTTCAACGTCTTCAGCACTGTT CTCCTCCTGCAGGCCCAGACCTACAGCGGCGACCTCAAGCTGGCCCACTACATGAAGATCCCGCCCAGGCTTACC CTCTCCTGCCAGCTTGTCGCCACTTTTTGGTCCAGTGTCGTCCAGGTGGCCGTCATGTACTGGACCCTGGGCCAC GTCGACGGCATCTGCGAGAACACGCAGCCCAACAACTTCACCTGCCCCAATGGCCGGGCCTTTTTCTCCTCCAAC GTCATTTGGGGCATCATCGGCCCGAGCCGCATGTTCGGCGCCCGCGGCATGTACACCCAGCTCAATCTCTTCTGG GTCGTCGGCGCCGCCCTGCCCGTACTGCTCTACGTCCTCACCAAGGTCTTCAAGATCCGCTTCTTCAGCCACTTA CAGGCCCCCGTCATCCTCGGCGCCATGGCTTGGCTGCCTCCCGGCACGCCCCTTAGCTACTCGACCTGGGCCATC GTCGGCCTCGTCTTTAACTACGGGATCCGCCGCAGATTCAAGTCCTGGTGGATGGCTTTCAACTTCACCACCGCC GCCGCCCTCGACTGTGGCCTCGTCCTATGCACCATTGTCGTCTTCCTCGCCATCACTTTGCCGGGGATCAAGGGT CCGCAGTGGTGGGGGAACACGACTGTGTTCCAGACGCTCGATGCCACGAATCGCGCAACGCTGAAGACGGTGGCT GAGGGAGAGACCTTTGGACCGAAGGAATGGTAG |