Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|11203
Gene name
Location	Contig_985:335..1722
Strand	-
Gene length (bp)	1387
Transcript length (bp)	1125
Coding sequence length (bp)	1125
Protein length (aa)	375

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08216	CTNNBL	Catenin-beta-like, Arm-motif containing nuclear	5.4E-35	103	206

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UUK1\|CTBL1_SCHPO	Beta-catenin-like protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctnnbl1 PE=1 SV=1	90	373	1.0E-62
sp\|Q8WYA6\|CTBL1_HUMAN	Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1	121	366	2.0E-46
sp\|Q4V8K2\|CTBL1_RAT	Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=1 SV=1	121	366	7.0E-46
sp\|Q9CWL8\|CTBL1_MOUSE	Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1	121	366	2.0E-45
sp\|O62703\|CTBL1_BOVIN	Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3	121	366	1.0E-44

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 57	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|11203 MASIDDIFKNVGVPSKRKLEAIKDPNEIYKSSKLSSSNGSSRHGSDPDGGDVAHGDDDDDLEAGPAMPPPPPPPG QDGPEEPDVGDDDEGRFFGGGITKQESEVLDFVEGAGEAAQGPEKIDLGWLRKTAQNLERRIAKNAELRAKFESE PAKFIGSEADLDADIKALSILSEHPALYPDFAELGGAGQLVGLLAHDNTDIAIDAIEIIGELTDEDVAAEDEQWN GLVDALLDADLVGLLVSNFARLDEEDEADRNGVYYALGVVENLCSRPATAARMGREDGLLTWLLRRIQRKEARVS QNKQYAAEVLAILSQSSAEGRGRIVGLDAVDAMLQLVARYRKGDPDKGGEEEEYMEDLFEALTCLVDEPAGKAK*
Coding	>Hirsu2\|11203 ATGGCCAGCATCGACGACATTTTCAAGAACGTCGGCGTGCCCAGCAAGCGGAAGCTGGAGGCCATCAAAGACCCG AACGAGATATACAAGTCCAGCAAGCTCAGCAGCAGCAACGGCTCGAGCCGCCACGGATCCGATCCGGATGGCGGC GACGTGGCCCACGGCGACGACGATGACGACCTCGAAGCCGGCCCGGCGATGCCGCCGCCGCCGCCGCCGCCGGGG CAAGACGGCCCGGAAGAGCCCGATGTAGGCGACGACGACGAGGGCCGCTTCTTCGGCGGCGGCATCACCAAGCAG GAGTCCGAGGTGCTCGACTTCGTAGAGGGCGCCGGCGAGGCGGCCCAGGGCCCCGAAAAGATCGACCTGGGCTGG CTGCGCAAGACGGCACAGAACCTGGAAAGGCGCATCGCCAAGAACGCCGAGCTGCGGGCCAAGTTCGAGAGTGAG CCGGCCAAGTTCATCGGCAGCGAGGCCGACCTCGACGCCGACATCAAGGCCCTGTCCATCCTGTCGGAGCACCCC GCGCTCTACCCGGACTTCGCCGAGCTCGGCGGCGCCGGCCAGCTGGTCGGCCTGCTGGCCCACGACAACACGGAC ATCGCCATCGACGCCATCGAGATCATCGGCGAGCTGACGGACGAGGACGTGGCCGCCGAAGACGAGCAGTGGAAC GGCCTGGTCGACGCCCTGCTGGACGCCGACCTTGTCGGCCTGCTCGTCTCCAACTTTGCCCGCCTGGACGAGGAG GACGAGGCGGACCGGAACGGCGTCTACTACGCGCTCGGCGTCGTCGAGAACCTGTGCTCGCGGCCGGCCACGGCG GCGCGCATGGGCCGCGAGGACGGCCTGCTGACCTGGCTGCTGCGGCGCATCCAGCGCAAGGAGGCGCGCGTGTCG CAGAACAAGCAGTACGCGGCCGAGGTGCTGGCCATCCTGTCGCAGTCGTCGGCCGAGGGCCGCGGCCGCATCGTC GGCCTCGACGCCGTCGACGCCATGCTGCAGCTGGTGGCGCGCTACCGCAAGGGCGACCCGGACAAGGGCGGCGAG GAGGAGGAGTACATGGAGGACCTGTTCGAGGCCCTGACCTGCCTCGTCGACGAGCCGGCCGGCAAGGCCAAATGA
Transcript	>Hirsu2\|11203 ATGGCCAGCATCGACGACATTTTCAAGAACGTCGGCGTGCCCAGCAAGCGGAAGCTGGAGGCCATCAAAGACCCG AACGAGATATACAAGTCCAGCAAGCTCAGCAGCAGCAACGGCTCGAGCCGCCACGGATCCGATCCGGATGGCGGC GACGTGGCCCACGGCGACGACGATGACGACCTCGAAGCCGGCCCGGCGATGCCGCCGCCGCCGCCGCCGCCGGGG CAAGACGGCCCGGAAGAGCCCGATGTAGGCGACGACGACGAGGGCCGCTTCTTCGGCGGCGGCATCACCAAGCAG GAGTCCGAGGTGCTCGACTTCGTAGAGGGCGCCGGCGAGGCGGCCCAGGGCCCCGAAAAGATCGACCTGGGCTGG CTGCGCAAGACGGCACAGAACCTGGAAAGGCGCATCGCCAAGAACGCCGAGCTGCGGGCCAAGTTCGAGAGTGAG CCGGCCAAGTTCATCGGCAGCGAGGCCGACCTCGACGCCGACATCAAGGCCCTGTCCATCCTGTCGGAGCACCCC GCGCTCTACCCGGACTTCGCCGAGCTCGGCGGCGCCGGCCAGCTGGTCGGCCTGCTGGCCCACGACAACACGGAC ATCGCCATCGACGCCATCGAGATCATCGGCGAGCTGACGGACGAGGACGTGGCCGCCGAAGACGAGCAGTGGAAC GGCCTGGTCGACGCCCTGCTGGACGCCGACCTTGTCGGCCTGCTCGTCTCCAACTTTGCCCGCCTGGACGAGGAG GACGAGGCGGACCGGAACGGCGTCTACTACGCGCTCGGCGTCGTCGAGAACCTGTGCTCGCGGCCGGCCACGGCG GCGCGCATGGGCCGCGAGGACGGCCTGCTGACCTGGCTGCTGCGGCGCATCCAGCGCAAGGAGGCGCGCGTGTCG CAGAACAAGCAGTACGCGGCCGAGGTGCTGGCCATCCTGTCGCAGTCGTCGGCCGAGGGCCGCGGCCGCATCGTC GGCCTCGACGCCGTCGACGCCATGCTGCAGCTGGTGGCGCGCTACCGCAAGGGCGACCCGGACAAGGGCGGCGAG GAGGAGGAGTACATGGAGGACCTGTTCGAGGCCCTGACCTGCCTCGTCGACGAGCCGGCCGGCAAGGCCAAATGA
Gene	>Hirsu2\|11203 ATGGCCAGCATCGACGACATTTTCAAGGTCCGTCCCGAGCCGGACCATCCTCCGGGCCTCGGCACCGCCCGGATC GTGCTGACGCCACGTAGAACGTCGGCGTGCCCAGCAAGCGGAAGCTGGAGGCCATCAAAGACCCGAGTCCGTTGC CTCGTCCCGTCTTGTTCATCTGCCCGTCCCTTCACGCTGGCCGCCGTTCCGACGCGGCGCGGGGAGGCCCCATCT CAATCCGTTTCCNNNNNNNNNNCCCCCCCCCCCCCCCTCTGCTGACCCTTCTTCGCAGACGAGATATACAAGTCC AGCAAGCTCAGCAGCAGCAACGGCTCGAGCCGCCACGGATCCGATCCGGATGGCGGCGACGTGGCCCACGGCGAC GACGATGACGACCTCGAAGCCGGCCCGGCGATGCCGCCGCCGCCGCCGCCGCCGGGGCAAGACGGCCCGGAAGAG CCCGATGTAGGCGACGACGACGAGGGCCGCTTCTTCGGCGGCGGCATCACCAAGCAGGAGTCCGAGGTGCTCGAC TTCGTAGAGGGCGCCGGCGAGGCGGCCCAGGGCCCCGAAAAGATCGACCTGGGCTGGCTGCGCAAGACGGCACAG AACCTGGAAAGGCGCATCGCCAAGAACGCCGAGCTGCGGGCCAAGTTCGAGAGTGAGCCGGCCAAGTTCATCGGC AGCGAGGCCGACCTCGACGCCGACATCAAGGCCCTGTCCATCCTGTCGGAGCACCCCGCGCTCTACCCGGACTTC GCCGAGCTCGGCGGCGCCGGCCAGCTGGTCGGCCTGCTGGCCCACGACAACACGGACATCGCCATCGACGCCATC GAGATCATCGGCGAGCTGACGGACGAGGACGTGGCCGCCGAAGACGAGCAGTGGAACGGCCTGGTCGACGCCCTG CTGGACGCCGACCTTGTCGGCCTGCTCGTCTCCAACTTTGCCCGCCTGGACGAGGAGGACGAGGCGGACCGGAAC GGCGTCTACTACGCGCTCGGCGTCGTCGAGAACCTGTGCTCGCGGCCGGCCACGGCGGCGCGCATGGGCCGCGAG GACGGCCTGCTGACCTGGCTGCTGCGGCGCATCCAGCGCAAGGAGGCGCGCGTGTCGCAGAACAAGCAGTACGCG GCCGAGGTGCTGGCCATCCTGTCGCAGTCGTCGGCCGAGGGCCGCGGCCGCATCGTCGGCCTCGACGCCGTCGAC GCCATGCTGCAGCTGGTGGCGCGCTACCGCAAGGGCGACCCGGACAAGGGCGGCGAGGAGGAGGAGTACATGGAG GACCTGTTCGAGGCCCTGACCTGCCTCGTCGACGAGCCGGCCGGCAAGGCCAAGTTCCTCGAGGCCGAGGGCGTC GAGCTGTGCCTCATCATGCTCCGGGACGGCAAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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