Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|112
Gene name
LocationContig_1016:6198..7541
Strand-
Gene length (bp)1343
Transcript length (bp)1284
Coding sequence length (bp)1284
Protein length (aa) 428

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05132 RNA_pol_Rpc4 RNA polymerase III RPC4 9.1E-34 245 411

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006383 transcription by RNA polymerase III Yes
GO:0003677 DNA binding Yes
GO:0005666 RNA polymerase III complex Yes
GO:0008152 metabolic process No
GO:0032991 protein-containing complex No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0140535 intracellular protein-containing complex No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0000428 DNA-directed RNA polymerase complex No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0006351 transcription, DNA-templated No
GO:0018130 heterocycle biosynthetic process No
GO:0061695 transferase complex, transferring phosphorus-containing groups No
GO:0090304 nucleic acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0005575 cellular_component No
GO:0030880 RNA polymerase complex No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:1902494 catalytic complex No
GO:0097659 nucleic acid-templated transcription No
GO:0055029 nuclear DNA-directed RNA polymerase complex No
GO:0044238 primary metabolic process No
GO:0140513 nuclear protein-containing complex No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:1990234 transferase complex No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus 0.4241 0.8525 0.0708 0.0221 0.1323 0.0226 0.0334 0.0253 0.0158 0.0403

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4882
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5829
Ophiocordyceps camponoti-floridani Ophcf2|04854
Ophiocordyceps camponoti-rufipedis Ophun1|6342
Ophiocordyceps kimflemingae Ophio5|5506
Ophiocordyceps subramaniannii Hirsu2|112 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|112
MGSRGGWGRGNASASGPFSTGFAGSSGAAGGWFGGGVPGGGFPGGGGRSMKSEGKGFGEADGARMREARINADKL
HVMTPAEELDSEDEAMMTALSNRTSSTMPMGIYRREHKETGVVVATTAELEAAENANGEGEEDSLWVDGDGAVPL
QQIEEQGVWDAKADKTVRIKAEPGLEDRMDLDIQAKPSPGKEKKPALETKPKKEVAQDPEDRTIQEDLRLLATEL
GAVTVEDNGETKTEAPANKDGRMYLFQFPPLIPPLRQVAAAPPRAKVKDEPDPFGSPDGAGHASASRPVDLTTED
AGRRQAGPAAGEGDEESEESEDDEAEEQDGFRSQMLPRGGLVGQLNVRKSGKVELDWGGMTLEMSPAAGMSFLTT
AIIVEENDEKAQHGVVGGDGIGMGKIMGRFVLAPIWSDEEEWKVAPHELLVG*
Coding >Hirsu2|112
ATGGGCAGCAGGGGCGGTTGGGGCCGGGGCAATGCGTCCGCCAGTGGACCCTTTTCCACGGGCTTTGCCGGGTCT
TCTGGAGCAGCGGGAGGCTGGTTCGGTGGAGGAGTGCCCGGCGGCGGCTTTCCCGGGGGCGGCGGGAGGTCCATG
AAGTCCGAAGGCAAAGGCTTCGGCGAGGCGGACGGAGCGCGAATGCGCGAAGCGAGGATCAATGCCGATAAGCTA
CACGTCATGACTCCGGCCGAGGAACTCGACAGCGAAGACGAGGCTATGATGACGGCGCTGAGCAACCGAACGTCC
AGCACCATGCCGATGGGCATATACCGAAGAGAACACAAGGAGACGGGGGTCGTTGTCGCCACGACAGCCGAGCTG
GAGGCCGCCGAAAATGCCAACGGCGAAGGCGAGGAAGACAGCCTCTGGGTTGACGGGGACGGGGCTGTGCCACTG
CAGCAGATAGAGGAGCAAGGCGTCTGGGATGCCAAGGCGGACAAGACGGTGCGCATCAAGGCAGAGCCCGGGCTC
GAGGACCGGATGGATCTCGACATACAGGCCAAGCCATCGCCCGGCAAGGAGAAGAAGCCGGCCCTGGAGACGAAG
CCCAAGAAGGAGGTGGCGCAGGACCCCGAAGACCGGACGATCCAAGAGGACCTGCGGCTGCTCGCGACCGAACTG
GGGGCCGTCACCGTCGAGGACAACGGCGAGACCAAAACCGAGGCCCCGGCCAATAAGGACGGCCGCATGTACCTG
TTCCAGTTCCCGCCGCTGATCCCGCCCCTGCGGCAGGTGGCCGCCGCGCCACCGCGCGCCAAGGTCAAGGACGAG
CCGGACCCGTTCGGGTCGCCGGACGGCGCGGGACACGCCAGCGCCTCGCGGCCCGTCGACCTCACGACCGAAGAC
GCCGGGCGGCGACAGGCGGGGCCCGCGGCCGGGGAGGGCGACGAGGAGTCGGAGGAGTCGGAGGACGACGAGGCG
GAGGAGCAGGACGGCTTCCGGTCGCAGATGCTGCCGCGGGGCGGCCTGGTGGGCCAGCTCAACGTGCGCAAGTCG
GGCAAGGTGGAGCTGGACTGGGGCGGCATGACGCTGGAGATGAGCCCGGCGGCCGGCATGAGCTTCCTGACGACG
GCCATCATCGTCGAGGAGAACGACGAGAAGGCACAGCACGGCGTCGTCGGCGGCGACGGCATCGGCATGGGCAAG
ATCATGGGCCGCTTCGTCCTCGCGCCCATCTGGAGCGACGAGGAGGAGTGGAAGGTGGCGCCGCACGAGCTGCTC
GTCGGCTGA
Transcript >Hirsu2|112
ATGGGCAGCAGGGGCGGTTGGGGCCGGGGCAATGCGTCCGCCAGTGGACCCTTTTCCACGGGCTTTGCCGGGTCT
TCTGGAGCAGCGGGAGGCTGGTTCGGTGGAGGAGTGCCCGGCGGCGGCTTTCCCGGGGGCGGCGGGAGGTCCATG
AAGTCCGAAGGCAAAGGCTTCGGCGAGGCGGACGGAGCGCGAATGCGCGAAGCGAGGATCAATGCCGATAAGCTA
CACGTCATGACTCCGGCCGAGGAACTCGACAGCGAAGACGAGGCTATGATGACGGCGCTGAGCAACCGAACGTCC
AGCACCATGCCGATGGGCATATACCGAAGAGAACACAAGGAGACGGGGGTCGTTGTCGCCACGACAGCCGAGCTG
GAGGCCGCCGAAAATGCCAACGGCGAAGGCGAGGAAGACAGCCTCTGGGTTGACGGGGACGGGGCTGTGCCACTG
CAGCAGATAGAGGAGCAAGGCGTCTGGGATGCCAAGGCGGACAAGACGGTGCGCATCAAGGCAGAGCCCGGGCTC
GAGGACCGGATGGATCTCGACATACAGGCCAAGCCATCGCCCGGCAAGGAGAAGAAGCCGGCCCTGGAGACGAAG
CCCAAGAAGGAGGTGGCGCAGGACCCCGAAGACCGGACGATCCAAGAGGACCTGCGGCTGCTCGCGACCGAACTG
GGGGCCGTCACCGTCGAGGACAACGGCGAGACCAAAACCGAGGCCCCGGCCAATAAGGACGGCCGCATGTACCTG
TTCCAGTTCCCGCCGCTGATCCCGCCCCTGCGGCAGGTGGCCGCCGCGCCACCGCGCGCCAAGGTCAAGGACGAG
CCGGACCCGTTCGGGTCGCCGGACGGCGCGGGACACGCCAGCGCCTCGCGGCCCGTCGACCTCACGACCGAAGAC
GCCGGGCGGCGACAGGCGGGGCCCGCGGCCGGGGAGGGCGACGAGGAGTCGGAGGAGTCGGAGGACGACGAGGCG
GAGGAGCAGGACGGCTTCCGGTCGCAGATGCTGCCGCGGGGCGGCCTGGTGGGCCAGCTCAACGTGCGCAAGTCG
GGCAAGGTGGAGCTGGACTGGGGCGGCATGACGCTGGAGATGAGCCCGGCGGCCGGCATGAGCTTCCTGACGACG
GCCATCATCGTCGAGGAGAACGACGAGAAGGCACAGCACGGCGTCGTCGGCGGCGACGGCATCGGCATGGGCAAG
ATCATGGGCCGCTTCGTCCTCGCGCCCATCTGGAGCGACGAGGAGGAGTGGAAGGTGGCGCCGCACGAGCTGCTC
GTCGGCTGA
Gene >Hirsu2|112
ATGGGCAGCAGGGGCGGTTGGGGCCGGGGCAATGCGTCCGCCAGTGGACCCTTTTCCACGGGCTTTGCCGGGTGT
GAGTTTGTCGTGCCCGTGCCGCGACTACGAGGTCGACCATGCTGACTAGTCCCATAGCTTCTGGAGCAGCGGGAG
GCTGGTTCGGTGGAGGAGTGCCCGGCGGCGGCTTTCCCGGGGGCGGCGGGAGGTCCATGAAGTCCGAAGGCAAAG
GCTTCGGCGAGGCGGACGGAGCGCGAATGCGCGAAGCGAGGATCAATGCCGATAAGCTACACGTCATGACTCCGG
CCGAGGAACTCGACAGCGAAGACGAGGCTATGATGACGGCGCTGAGCAACCGAACGTCCAGCACCATGCCGATGG
GCATATACCGAAGAGAACACAAGGAGACGGGGGTCGTTGTCGCCACGACAGCCGAGCTGGAGGCCGCCGAAAATG
CCAACGGCGAAGGCGAGGAAGACAGCCTCTGGGTTGACGGGGACGGGGCTGTGCCACTGCAGCAGATAGAGGAGC
AAGGCGTCTGGGATGCCAAGGCGGACAAGACGGTGCGCATCAAGGCAGAGCCCGGGCTCGAGGACCGGATGGATC
TCGACATACAGGCCAAGCCATCGCCCGGCAAGGAGAAGAAGCCGGCCCTGGAGACGAAGCCCAAGAAGGAGGTGG
CGCAGGACCCCGAAGACCGGACGATCCAAGAGGACCTGCGGCTGCTCGCGACCGAACTGGGGGCCGTCACCGTCG
AGGACAACGGCGAGACCAAAACCGAGGCCCCGGCCAATAAGGACGGCCGCATGTACCTGTTCCAGTTCCCGCCGC
TGATCCCGCCCCTGCGGCAGGTGGCCGCCGCGCCACCGCGCGCCAAGGTCAAGGACGAGCCGGACCCGTTCGGGT
CGCCGGACGGCGCGGGACACGCCAGCGCCTCGCGGCCCGTCGACCTCACGACCGAAGACGCCGGGCGGCGACAGG
CGGGGCCCGCGGCCGGGGAGGGCGACGAGGAGTCGGAGGAGTCGGAGGACGACGAGGCGGAGGAGCAGGACGGCT
TCCGGTCGCAGATGCTGCCGCGGGGCGGCCTGGTGGGCCAGCTCAACGTGCGCAAGTCGGGCAAGGTGGAGCTGG
ACTGGGGCGGCATGACGCTGGAGATGAGCCCGGCGGCCGGCATGAGCTTCCTGACGACGGCCATCATCGTCGAGG
AGAACGACGAGAAGGCACAGCACGGCGTCGTCGGCGGCGACGGCATCGGCATGGGCAAGATCATGGGCCGCTTCG
TCCTCGCGCCCATCTGGAGCGACGAGGAGGAGTGGAAGGTGGCGCCGCACGAGCTGCTCGTCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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