Protein ID | Hirsu2|11190 |
Gene name | |
Location | Contig_980:4554..5531 |
Strand | - |
Gene length (bp) | 977 |
Transcript length (bp) | 789 |
Coding sequence length (bp) | 789 |
Protein length (aa) | 263 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07818 | HCNGP | HCNGP-like protein | 1.2E-28 | 125 | 220 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10069|MU151_SCHPO | Meiotically up-regulated gene 151 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug151 PE=1 SV=1 | 121 | 236 | 2.0E-14 |
sp|Q02614|S30BP_MOUSE | SAP30-binding protein OS=Mus musculus GN=Sap30bp PE=1 SV=2 | 123 | 234 | 6.0E-07 |
sp|Q9UHR5|S30BP_HUMAN | SAP30-binding protein OS=Homo sapiens GN=SAP30BP PE=1 SV=1 | 123 | 234 | 7.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0050794 | regulation of cellular process | No |
GO:0019222 | regulation of metabolic process | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:2000112 | regulation of cellular macromolecule biosynthetic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0010468 | regulation of gene expression | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0065007 | biological regulation | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0008150 | biological_process | No |
GO:0050789 | regulation of biological process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|11190 MAGLVGYDSSDDDDGGGEGQRPAPDAAHQPGPASSAPAPETGEAVGDAPQDVPSSKTEQPAPPRHVIGPVPQSAV PLGPSLPSPQDAAAMSGEGDDEAEAPPSPYSANRALIHHLTLPSVPNLDIPPSPPGSPPARVSKGFEEFLALKRK GTHFNAKLEQSTALKNPSIMDKLMNFVGLDMAQQYETTLSPDLWNPMAFPETAYGDNLRKSRERLATEKEADKSS GGRTSVDFVPSSSITSDGTVPLAGGLTKRDRTRSSWR* |
Coding | >Hirsu2|11190 ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC GCAGCCCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGTTGGCGACGCGCCGCAG GACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTCCTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTC CCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGGCCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCT CCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTCACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATC CCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCAGCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAG GGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGGCGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAAC TTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGACACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCC GAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCGAGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGC GGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGTCAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGA CTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGTGA |
Transcript | >Hirsu2|11190 ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC GCAGCCCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGTTGGCGACGCGCCGCAG GACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTCCTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTC CCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGGCCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCT CCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTCACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATC CCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCAGCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAG GGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGGCGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAAC TTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGACACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCC GAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCGAGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGC GGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGTCAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGA CTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGTGA |
Gene | >Hirsu2|11190 ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC GCAGCCGTGAGTGATTCACCCCGGCGGGACAACAACGGCCCTCGTCCGCGCACGCGAGACATGCTCATCGACTGC AGCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGGTGAGTCACATCCATCCAGGC AAGCCGGACGGAGGACGCTGTGAAGCCCGTTCTCTCGCACCACCGAGGATGCTGGGCTAAAATCCCTGCCTCTCC CCGCGTCTCCCTTTTGCACAGTTGGCGACGCGCCGCAGGACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTC CTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTCCCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGG CCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCTCCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTC ACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATCCCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCA GCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAGGGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGG CGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAACTTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGA CACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCCGAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCG AGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGCGGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGT CAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGACTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGT GA |