Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11190
Gene name
LocationContig_980:4554..5531
Strand-
Gene length (bp)977
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07818 HCNGP HCNGP-like protein 1.2E-28 125 220

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10069|MU151_SCHPO Meiotically up-regulated gene 151 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug151 PE=1 SV=1 121 236 2.0E-14
sp|Q02614|S30BP_MOUSE SAP30-binding protein OS=Mus musculus GN=Sap30bp PE=1 SV=2 123 234 6.0E-07
sp|Q9UHR5|S30BP_HUMAN SAP30-binding protein OS=Homo sapiens GN=SAP30BP PE=1 SV=1 123 234 7.0E-07

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0050794 regulation of cellular process No
GO:0019222 regulation of metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0010468 regulation of gene expression No
GO:0031326 regulation of cellular biosynthetic process No
GO:0009889 regulation of biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0065007 biological regulation No
GO:0031323 regulation of cellular metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0008150 biological_process No
GO:0050789 regulation of biological process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11190
MAGLVGYDSSDDDDGGGEGQRPAPDAAHQPGPASSAPAPETGEAVGDAPQDVPSSKTEQPAPPRHVIGPVPQSAV
PLGPSLPSPQDAAAMSGEGDDEAEAPPSPYSANRALIHHLTLPSVPNLDIPPSPPGSPPARVSKGFEEFLALKRK
GTHFNAKLEQSTALKNPSIMDKLMNFVGLDMAQQYETTLSPDLWNPMAFPETAYGDNLRKSRERLATEKEADKSS
GGRTSVDFVPSSSITSDGTVPLAGGLTKRDRTRSSWR*
Coding >Hirsu2|11190
ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC
GCAGCCCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGTTGGCGACGCGCCGCAG
GACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTCCTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTC
CCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGGCCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCT
CCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTCACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATC
CCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCAGCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAG
GGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGGCGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAAC
TTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGACACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCC
GAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCGAGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGC
GGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGTCAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGA
CTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGTGA
Transcript >Hirsu2|11190
ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC
GCAGCCCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGTTGGCGACGCGCCGCAG
GACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTCCTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTC
CCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGGCCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCT
CCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTCACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATC
CCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCAGCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAG
GGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGGCGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAAC
TTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGACACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCC
GAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCGAGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGC
GGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGTCAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGA
CTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGTGA
Gene >Hirsu2|11190
ATGGCCGGCCTCGTCGGCTACGACAGCAGCGACGACGACGACGGCGGCGGCGAGGGCCAGCGCCCGGCCCCAGAC
GCAGCCGTGAGTGATTCACCCCGGCGGGACAACAACGGCCCTCGTCCGCGCACGCGAGACATGCTCATCGACTGC
AGCACCAGCCGGGCCCTGCGTCCTCCGCGCCCGCGCCCGAGACTGGTGAAGCTGGTGAGTCACATCCATCCAGGC
AAGCCGGACGGAGGACGCTGTGAAGCCCGTTCTCTCGCACCACCGAGGATGCTGGGCTAAAATCCCTGCCTCTCC
CCGCGTCTCCCTTTTGCACAGTTGGCGACGCGCCGCAGGACGTGCCGTCCTCGAAAACGGAGCAGCCCGCGCCTC
CTCGGCATGTGATCGGCCCCGTGCCACAAAGCGCAGTCCCTCTCGGGCCGTCCTTGCCCTCCCCTCAAGATGCGG
CCGCCATGAGCGGCGAAGGCGATGATGAGGCGGAGGCTCCGCCGTCGCCCTACTCGGCCAACCGTGCCCTCATTC
ACCACCTCACCCTGCCGTCCGTGCCGAACCTGGACATCCCCCCGTCGCCGCCCGGCTCACCGCCCGCGCGCGTCA
GCAAGGGCTTCGAAGAGTTCCTCGCGCTCAAGAGGAAGGGCACGCATTTCAACGCGAAGCTTGAGCAGTCGACGG
CGCTCAAGAACCCGAGCATCATGGACAAGCTCATGAACTTTGTGGGCTTGGACATGGCACAGCAGTACGAGACGA
CACTCTCGCCTGACCTCTGGAACCCCATGGCCTTCCCCGAAACGGCCTACGGGGACAATCTGAGAAAGAGTCGCG
AGAGGCTCGCCACGGAGAAGGAAGCAGACAAATCGAGCGGTGGGCGGACCTCGGTCGATTTCGTACCATCGTCGT
CAATCACCAGCGATGGAACCGTGCCGCTAGCCGGCGGACTCACCAAACGGGACCGAACTAGGAGCAGTTGGAGGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail