Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11189
Gene name
LocationContig_980:2831..4178
Strand+
Gene length (bp)1347
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12505 DUF3712 Protein of unknown function (DUF3712) 1.2E-22 118 240

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11189
MSDSKYDVSQTETGVSPTPAKKRTCATHCRRFWWLHLLIFAAVIILVVCLIIFVGVPNISQSKMNAAELDIQGVH
VLQTRADSYLMQINSTITTDGSIHADIDPFDGYMSLADIDGAKPFATLRFPATTADRHQVVNISQTIQIRDKDAF
NKFNTVFFHNEKLRVRVQGKTQVQPAGLTRKYDVDFNKVLEVNGLNLLKGTNVTDGNVNIAALKGTPNFKGTAEI
PNISHFTLDIGNATFINYADEQDLGKLTINNLILRPGKNVVAVEAELDQLKVLDIISKRPYCENGIVPFKLMGSD
VVNMGETLDYFATALASANQTVSINIGSFLEKAIDGYKVACKKS*
Coding >Hirsu2|11189
ATGTCGGACAGCAAGTATGACGTCTCGCAGACCGAGACGGGCGTCAGCCCGACGCCCGCCAAGAAGCGTACCTGC
GCCACCCACTGCAGGCGCTTCTGGTGGCTTCACCTGCTCATCTTTGCCGCCGTCATCATCCTCGTCGTCTGCCTC
ATCATCTTCGTCGGCGTCCCCAACATTTCCCAGAGCAAGATGAACGCCGCCGAGCTCGACATCCAAGGCGTCCAC
GTCCTGCAGACAAGGGCCGATTCCTACCTGATGCAGATCAACTCCACCATCACCACCGACGGCTCCATCCACGCC
GACATCGACCCCTTCGACGGCTACATGTCCCTGGCCGACATCGACGGCGCCAAGCCCTTCGCCACCCTGCGCTTC
CCCGCCACCACGGCCGACCGCCACCAGGTCGTCAACATCAGCCAGACCATCCAGATCCGGGACAAGGACGCCTTC
AACAAGTTCAACACCGTCTTCTTCCACAACGAGAAGCTGCGCGTCCGCGTCCAAGGAAAGACGCAGGTCCAGCCC
GCCGGCCTCACCAGAAAGTACGACGTCGACTTCAACAAGGTGCTCGAGGTCAACGGCCTGAACCTGCTCAAGGGC
ACCAACGTCACCGACGGCAACGTCAACATCGCCGCCCTCAAGGGCACCCCCAACTTCAAGGGCACCGCCGAAATC
CCCAATATCTCCCACTTCACCCTCGACATTGGCAACGCCACCTTCATCAACTATGCCGACGAGCAGGACCTCGGC
AAGCTCACCATCAACAACCTGATCCTCCGCCCCGGCAAAAACGTGGTCGCCGTCGAGGCCGAGCTGGACCAGCTC
AAGGTCCTCGACATCATCTCCAAGAGGCCCTACTGCGAAAATGGCATCGTTCCCTTCAAGCTCATGGGCTCCGAC
GTCGTCAACATGGGCGAGACGCTCGACTACTTCGCCACCGCCCTGGCCAGCGCCAACCAAACCGTAAGCATCAAC
ATCGGCAGCTTCCTCGAAAAGGCCATCGACGGCTACAAGGTTGCCTGCAAAAAGTCGTAG
Transcript >Hirsu2|11189
ATGTCGGACAGCAAGTATGACGTCTCGCAGACCGAGACGGGCGTCAGCCCGACGCCCGCCAAGAAGCGTACCTGC
GCCACCCACTGCAGGCGCTTCTGGTGGCTTCACCTGCTCATCTTTGCCGCCGTCATCATCCTCGTCGTCTGCCTC
ATCATCTTCGTCGGCGTCCCCAACATTTCCCAGAGCAAGATGAACGCCGCCGAGCTCGACATCCAAGGCGTCCAC
GTCCTGCAGACAAGGGCCGATTCCTACCTGATGCAGATCAACTCCACCATCACCACCGACGGCTCCATCCACGCC
GACATCGACCCCTTCGACGGCTACATGTCCCTGGCCGACATCGACGGCGCCAAGCCCTTCGCCACCCTGCGCTTC
CCCGCCACCACGGCCGACCGCCACCAGGTCGTCAACATCAGCCAGACCATCCAGATCCGGGACAAGGACGCCTTC
AACAAGTTCAACACCGTCTTCTTCCACAACGAGAAGCTGCGCGTCCGCGTCCAAGGAAAGACGCAGGTCCAGCCC
GCCGGCCTCACCAGAAAGTACGACGTCGACTTCAACAAGGTGCTCGAGGTCAACGGCCTGAACCTGCTCAAGGGC
ACCAACGTCACCGACGGCAACGTCAACATCGCCGCCCTCAAGGGCACCCCCAACTTCAAGGGCACCGCCGAAATC
CCCAATATCTCCCACTTCACCCTCGACATTGGCAACGCCACCTTCATCAACTATGCCGACGAGCAGGACCTCGGC
AAGCTCACCATCAACAACCTGATCCTCCGCCCCGGCAAAAACGTGGTCGCCGTCGAGGCCGAGCTGGACCAGCTC
AAGGTCCTCGACATCATCTCCAAGAGGCCCTACTGCGAAAATGGCATCGTTCCCTTCAAGCTCATGGGCTCCGAC
GTCGTCAACATGGGCGAGACGCTCGACTACTTCGCCACCGCCCTGGCCAGCGCCAACCAAACCGTAAGCATCAAC
ATCGGCAGCTTCCTCGAAAAGGCCATCGACGGCTACAAGGTTGCCTGCAAAAAGTCGTAG
Gene >Hirsu2|11189
ATGTCGGACAGCAAGTATGACGTCTCGCAGACCGAGACGGGCGTCAGCCCGACGCCCGCCAAGAAGCGTACCTGC
GCCACCCACTGCAGGCGCTTCTGGTGGCTTCACCTGCTCATCTTTGCCGCCGTCATCATCCTCGTCGTCTGCCTC
ATGTGAGTTCTCGTCGTCCCCGTCGCGAGTGAGAAAAAAAAAAGACACAGAGAGAGAGAGAGAGAGAGACAGAGA
CATCAACAGATTGAGAGGGGGCACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATCAACAGAGTGAGG
GGAAAGGCACAGGGGGGTAGAGGACGGAGAGGGGGAGATAACAAAGGCAAAAGAGACACTCGGCGCTGACACCGC
AACTTGCCAGCATCTTCGTCGGCGTCCCCAACATTTCCCAGAGCAAGATGAACGCCGCCGAGCTCGACATCCAAG
GCGTCCACGTCCTGCAGACAAGGGCCGATTCCTACCTGATGCAGATCAACTCCACCATCACCACCGACGGCTCCA
TCCACGCCGACATCGACCCCTTCGACGGCTACATGTCCCTGGCCGACATCGACGGCGCCAAGCCCTTCGCCACCC
TGCGCTTCCCCGCCACCACGGCCGACCGCCACCAGGTCGTCAACATCAGCCAGACCATCCAGATCCGGGACAAGG
ACGCCTTCAACAAGTTCAACACCGTCTTCTTCCACAACGAGAAGCTGCGCGTCCGCGTCCAAGGAAAGACGCAGG
TCCAGCCCGCCGGCCTCACCAGAAAGTACGACGTCGACTTCAACAAGGTGCTCGAGGTCAACGGCCTGAACCTGC
TCAAGGGCACCAACGTCACCGACGGCAACGTCAACATCGCCGCCCTCAAGGGCACCCCCAACTTCAAGGGCACCG
CCGAAATCCCCAATATCTCCCACTTCACCCTCGACATTGTAAGTTGCCACCGTCACGAGTTGGGCCTCGGCTCGT
CCCCAAACTGCGAGACCCCCGTGCTGACCTGTTATTCGTCAGGGCAACGCCACCTTCATCAACTATGCCGACGAG
CAGGACCTCGGCAAGCTCACCATCAACAACCTGATCCTCCGCCCCGGCAAAAACGTGGTCGCCGTCGAGGCCGAG
CTGGACCAGCTCAAGGTCCTCGACATCATCTCCAAGAGGCCCTACTGCGAAAATGGCATCGTTCCCTTCAAGCTC
ATGGGCTCCGACGTCGTCAACATGGGCGAGACGCTCGACTACTTCGCCACCGCCCTGGCCAGCGCCAACCAAACC
GTAAGCATCAACATCGGCAGCTTCCTCGAAAAGGCCATCGACGGCTACAAGGTTGCCTGCAAAAAGTCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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