© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|11177 |
| Gene name | |
| Location | Contig_979:8495..9843 |
| Strand | + |
| Gene length (bp) | 1348 |
| Transcript length (bp) | 1032 |
| Coding sequence length (bp) | 1032 |
| Protein length (aa) | 344 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07660|BRE4_YEAST | Protein BRE4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRE4 PE=1 SV=1 | 2 | 314 | 5.0E-36 |
| sp|Q75E41|BRE4_ASHGO | Protein BRE4 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BRE4 PE=3 SV=2 | 4 | 337 | 7.0E-31 |
| sp|Q10495|YDG8_SCHPO | Uncharacterized protein C26F1.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26F1.08c PE=4 SV=1 | 5 | 290 | 4.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 39 | 56 | 17 |
| 3 | 63 | 80 | 17 |
| 4 | 95 | 117 | 22 |
| 5 | 124 | 146 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|11177 MHPRVGGNLQDLVIRGFMAILGATWSGAAHAAGGGSPYVMAVFAAVFMLPMLYRFTQSSHPRSGLIGCLSFTVIS LGLQAEGGGSSPVKLAVFKGIAFFVGATAPVLINWVLWPFVARHELRYALSSMMFFMSVIYRSVVARYVYFYEGT EPTPEDVERSEMLEGRLREGFVRIRQLLVLTQKEIRLRAPFDPLPYSALADACERFFEYLVAVRQSALFYNPDYI RDNPVAAAQLLGFRRDAVATVLANLYILAGALRSQRKVPRYLPSAAAARKRLLVRNAEVDEEMSRSASGSDAAWH RRWSDIYRYSYNESLTGCVAQLEELEKLTKLIVGEQGFDEDGG* |
| Coding | >Hirsu2|11177 ATGCACCCTAGAGTGGGCGGCAATCTCCAGGATCTCGTCATCAGGGGCTTCATGGCCATCCTCGGCGCTACTTGG AGCGGCGCTGCACATGCGGCCGGCGGTGGGAGCCCGTACGTGATGGCGGTCTTCGCTGCCGTGTTCATGCTACCC ATGCTGTACCGCTTCACACAAAGCTCACATCCGCGATCCGGACTCATTGGCTGTCTGTCCTTCACGGTCATTTCG CTCGGGCTACAAGCCGAGGGCGGCGGCTCCTCCCCAGTCAAGCTTGCGGTGTTCAAGGGCATCGCATTCTTCGTC GGCGCGACGGCTCCCGTACTCATCAACTGGGTTCTCTGGCCGTTCGTGGCCAGGCACGAGCTGAGATACGCGCTG TCTTCCATGATGTTTTTCATGAGCGTCATCTATCGCAGCGTCGTTGCCCGCTATGTGTATTTCTACGAGGGTACC GAACCCACGCCCGAGGACGTGGAGAGATCGGAGATGCTGGAAGGACGCCTCCGAGAAGGGTTTGTTCGGATCAGG CAGCTCCTGGTGCTCACGCAGAAGGAAATACGGCTCCGCGCCCCCTTCGACCCCCTGCCCTACTCGGCGCTGGCG GACGCGTGCGAGCGCTTCTTCGAGTACCTGGTGGCCGTGCGGCAGTCGGCGCTCTTCTACAACCCGGACTACATC CGCGACAACCCCGTCGCCGCGGCGCAGCTCCTGGGCTTCCGCCGGGACGCCGTGGCGACGGTCCTGGCCAACCTG TACATCCTGGCCGGGGCGCTGCGGTCGCAGCGCAAGGTGCCGCGATACCTGCCGAGCGCCGCCGCGGCGCGCAAG AGGCTGCTGGTGCGCAACGCCGAGGTGGACGAGGAGATGTCGCGGAGCGCGAGCGGCAGCGACGCGGCGTGGCAC AGGCGCTGGAGCGACATCTACCGCTACTCATACAACGAGAGCCTGACGGGCTGCGTCGCCCAGCTGGAGGAGCTC GAGAAGCTGACCAAGCTCATCGTGGGCGAGCAGGGTTTCGACGAGGACGGGGGGTAG |
| Transcript | >Hirsu2|11177 ATGCACCCTAGAGTGGGCGGCAATCTCCAGGATCTCGTCATCAGGGGCTTCATGGCCATCCTCGGCGCTACTTGG AGCGGCGCTGCACATGCGGCCGGCGGTGGGAGCCCGTACGTGATGGCGGTCTTCGCTGCCGTGTTCATGCTACCC ATGCTGTACCGCTTCACACAAAGCTCACATCCGCGATCCGGACTCATTGGCTGTCTGTCCTTCACGGTCATTTCG CTCGGGCTACAAGCCGAGGGCGGCGGCTCCTCCCCAGTCAAGCTTGCGGTGTTCAAGGGCATCGCATTCTTCGTC GGCGCGACGGCTCCCGTACTCATCAACTGGGTTCTCTGGCCGTTCGTGGCCAGGCACGAGCTGAGATACGCGCTG TCTTCCATGATGTTTTTCATGAGCGTCATCTATCGCAGCGTCGTTGCCCGCTATGTGTATTTCTACGAGGGTACC GAACCCACGCCCGAGGACGTGGAGAGATCGGAGATGCTGGAAGGACGCCTCCGAGAAGGGTTTGTTCGGATCAGG CAGCTCCTGGTGCTCACGCAGAAGGAAATACGGCTCCGCGCCCCCTTCGACCCCCTGCCCTACTCGGCGCTGGCG GACGCGTGCGAGCGCTTCTTCGAGTACCTGGTGGCCGTGCGGCAGTCGGCGCTCTTCTACAACCCGGACTACATC CGCGACAACCCCGTCGCCGCGGCGCAGCTCCTGGGCTTCCGCCGGGACGCCGTGGCGACGGTCCTGGCCAACCTG TACATCCTGGCCGGGGCGCTGCGGTCGCAGCGCAAGGTGCCGCGATACCTGCCGAGCGCCGCCGCGGCGCGCAAG AGGCTGCTGGTGCGCAACGCCGAGGTGGACGAGGAGATGTCGCGGAGCGCGAGCGGCAGCGACGCGGCGTGGCAC AGGCGCTGGAGCGACATCTACCGCTACTCATACAACGAGAGCCTGACGGGCTGCGTCGCCCAGCTGGAGGAGCTC GAGAAGCTGACCAAGCTCATCGTGGGCGAGCAGGGTTTCGACGAGGACGGGGGGTAG |
| Gene | >Hirsu2|11177 ATGCACCCTAGAGTGGGCGGCAATCTCCAGGATCTCGTCATCAGGGGCTTCATGGCCATCCTCGGCGCTACTTGG AGCGGCGCTGCACATGCGGCCGGCGGTGGGAGCCCGTACGTGATGGCGGTCTTCGCTGCCGTGTTCATGCTACCC ATGCTGTACCGCTTCACACAAAGCTCACATCCGGTAGATTCCCTACCTGGGCCGAGAAAGGGTCTTCTGAGGAAT AACGCGCTGACGAGTTCACTAGCGATCCGGACTCATTGGCTGTCTGTCCTTCACGGTCATTTCGCTCGGGCTACA AGCCGAGGGCGGCGGCTCCTCCCCAGTCAAGCTTGCGGTGTTCAAGGGCATCGCATTCTTCGTCGGCGCGACGGC TCCCGTACTCATCAACTGGGTTCTCTGGCCGTTCGTGGCCAGGCACGAGCTGAGATACGCGCTGTCTTCCATGAT GTTTTTCATGAGCGTCATCTATCGCAGTAGGTTCCCGAGTCCGTCTCGCGAAGCAGGCCGCGGTTTCTTACTGGT GATAGGCGTCGTTGCCCGCTATGTGTATTTCTACGAGGGTACCGAACCCACGCCCGAGGACGTGGAGAGATCGGA GATGCTGGAAGGACGCCTCCGAGAAGGGTTTGTTCGGATCAGGCAGCTCCTGGTGAGTAGCTCTTCAAGCAGCGG AGCATCGAGGCCGCGGCCGCCGCTGACGCGCGGCATCCAAAAGGTGCTCACGCAGAAGGAAATACGGCTCCGCGC CCCCTTCGACCCCCTGCCCTACTCGGCGCTGGCGGACGCGTGCGAGCGCTTCTTCGAGTACCTGGTGGCCGTGCG GCAGTCGGCGCTCTTCTACAACCCGGACTACATCCGCGACAACCCCGTCGCCGCGGCGCAGCTCCTGGGCTTCCG CCGGGACGCCGTGGCGACGGTCCTGGCCAACCTGTACATCCTGGCCGGGGCGCTGCGGTCGCAGCGCAAGGTGCC GGTGGGTGCAAGGGGATAAGAGAATCCCCCCCCTCCCTCCGAAGTCGCGCACACGCTGACGACCTCAGCGATACC TGCCGAGCGCCGCCGCGGCGCGCAAGAGGCTGCTGGTGCGCAACGCCGAGGTGGACGAGGAGATGTCGCGGAGCG CGAGCGGCAGCGACGCGGCGTGGCACAGGCGCTGGAGCGACATCTACCGCTACTCATACAACGAGAGCCTGACGG GCTGCGTCGCCCAGCTGGAGGAGCTCGAGAAGCTGACCAAGCTCATCGTGGGCGAGCAGGGGTAAGGCACCGCCC CTCACGAGGGCGGCTTTTGGCTGACGCGTCGGACGGACGCCCACGAGATAGTTTCGACGAGGACGGGGGGTAG |