Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11171
Gene name
LocationContig_978:8627..9085
Strand+
Gene length (bp)458
Transcript length (bp)264
Coding sequence length (bp)264
Protein length (aa) 88

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0C5R9|YP17B_YEAST Uncharacterized protein YPR170W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR170W-B PE=3 SV=1 1 79 2.0E-23
sp|P0C5R7|YP169_YEAST Putative uncharacterized protein YPR169W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR169W-A PE=5 SV=1 1 50 3.0E-13
sp|Q8NIQ1|YERI_SCHPO Uncharacterized membrane protein C2F3.18c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.18c PE=4 SV=3 1 72 8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 55 77 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11171
MKPVVSAMHAWSCTVISVFAIIILSILGGLYRAGHEEFVGGRDDPKDGKAVSGTIFTAVIVYAAFLVFCGFQGLL
HVRESRRGAIAL*
Coding >Hirsu2|11171
ATGAAGCCCGTCGTCAGTGCCATGCACGCATGGTCGTGCACCGTCATCTCCGTCTTCGCCATCATCATACTCAGC
ATCCTCGGCGGGCTGTACCGCGCCGGCCATGAGGAGTTCGTCGGCGGCCGCGACGACCCCAAGGATGGCAAGGCC
GTCTCCGGCACCATCTTCACCGCCGTCATCGTCTACGCTGCCTTCCTCGTCTTTTGCGGCTTCCAGGGCCTTCTC
CACGTCCGAGAGAGCCGGAGAGGCGCGATTGCGCTATGA
Transcript >Hirsu2|11171
ATGAAGCCCGTCGTCAGTGCCATGCACGCATGGTCGTGCACCGTCATCTCCGTCTTCGCCATCATCATACTCAGC
ATCCTCGGCGGGCTGTACCGCGCCGGCCATGAGGAGTTCGTCGGCGGCCGCGACGACCCCAAGGATGGCAAGGCC
GTCTCCGGCACCATCTTCACCGCCGTCATCGTCTACGCTGCCTTCCTCGTCTTTTGCGGCTTCCAGGGCCTTCTC
CACGTCCGAGAGAGCCGGAGAGGCGCGATTGCGCTATGA
Gene >Hirsu2|11171
ATGAAGCCCGTCGTCAGTGCCATGCACGCATGGTCGTGGTCCGTCCCGCCCCCTTCGGAAAAACGCCGCGGCGGC
GTGAGCTGACGTGAAGCCCCGGCGACAGCACCGTCATCTCCGTCTTCGCCATCATCATACTCAGCATCCTCGGCG
GGCTGTACCGCGCCGGCCATGAGGAGTTCGTCGGCGGCCGCGACGACCCCAAGGATGGCAAGGCCGTCTCCGGCA
CCATCTTCACCGCCGTCATCGTCTACGCTGTACGTCGCTCCCCGCCTTCCCCCCCCGGACGGCACGCCTCGACAT
CGGAGAGAGGGTGCGCGGAACGTGGGGCGGTGGGGGGGTGAAGGACCGTCGTCGAAGCTGACTATCGTTCTCTTC
CTCTGCAGGCCTTCCTCGTCTTTTGCGGCTTCCAGGGCCTTCTCCACGTCCGAGAGAGCCGGAGAGGCGCGATTG
CGCTATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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