Protein ID | Hirsu2|11169 |
Gene name | |
Location | Contig_978:3238..4095 |
Strand | - |
Gene length (bp) | 857 |
Transcript length (bp) | 798 |
Coding sequence length (bp) | 798 |
Protein length (aa) | 266 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4B5D4|SOD5_ARTBC | Cell surface Cu-only superoxide dismutase ARB_03674 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03674 PE=1 SV=1 | 4 | 183 | 2.0E-42 |
sp|Q5ACV9|SOD6_CANAL | Cell surface superoxide dismutase [Cu-Zn] 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD6 PE=1 SV=1 | 15 | 197 | 7.0E-26 |
sp|Q5AD05|SOD4_CANAL | Cell surface superoxide dismutase [Cu-Zn] 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD4 PE=1 SV=1 | 37 | 197 | 6.0E-22 |
sp|Q5AD07|SOD5_CANAL | Cell surface Cu-only superoxide dismutase 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD5 PE=1 SV=1 | 44 | 190 | 1.0E-21 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.0992 | 0.053 | 0.8513 | 0.4361 | 0.0897 | 0.0032 | 0.267 | 0.1196 | 0.1408 | 0.0025 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999548 |
Orthofinder run ID | 4 |
Orthogroup | 1511 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|11169 MRAASLFAASLSAGLAAAQATQDAPKISGNPTDVVYKASLPDQAFFTKGSLDGNVKGSITAQAPEDGVGVKFSVR FENIPKEGGPFIYHIHVNPVVDGNCTKTLTHLDPFNRGEKPPCDASAPQTCQVGDLSGKYGSVTQDPFVAEYVDP FTSLKEGDQAFFGNRSFVFHFGNTTRITCANFVKENDSQGASPSGTYGPPQPSTSASGTYGQPTRAAGGVTNIPA GTGGVVGPANSAVPVTGSAALNKLSLPLLAAAAAAIAFVM* |
Coding | >Hirsu2|11169 ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCATCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGC ACAAAGACGTTGACGCACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACG TGCCAGGTCGGCGATCTGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCC TTCACCTCGCTCAAGGAGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACG CGCATCACGTGCGCCAACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCC CAGCCCTCCACCTCGGCCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCC GGCACCGGCGGTGTCGTCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCG TTGCCGCTGCTGGCCGCCGCCGCTGCCGCCATCGCCTTTGTCATGTAG |
Transcript | >Hirsu2|11169 ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCATCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGC ACAAAGACGTTGACGCACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACG TGCCAGGTCGGCGATCTGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCC TTCACCTCGCTCAAGGAGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACG CGCATCACGTGCGCCAACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCC CAGCCCTCCACCTCGGCCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCC GGCACCGGCGGTGTCGTCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCG TTGCCGCTGCTGGCCGCCGCCGCTGCCGCCATCGCCTTTGTCATGTAG |
Gene | >Hirsu2|11169 ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCAGTACGTTTTTTCTCTGTTTGTTCTCGTCCCGGCCCGAGGCT GACTCTGGCTCTTTTCAGTCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGCACAAAGACGTTGACGC ACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACGTGCCAGGTCGGCGATC TGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCCTTCACCTCGCTCAAGG AGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACGCGCATCACGTGCGCCA ACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCCCAGCCCTCCACCTCGG CCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCCGGCACCGGCGGTGTCG TCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCGTTGCCGCTGCTGGCCG CCGCCGCTGCCGCCATCGCCTTTGTCATGTAG |