Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11169
Gene name
LocationContig_978:3238..4095
Strand-
Gene length (bp)857
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B5D4|SOD5_ARTBC Cell surface Cu-only superoxide dismutase ARB_03674 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03674 PE=1 SV=1 4 183 2.0E-42
sp|Q5ACV9|SOD6_CANAL Cell surface superoxide dismutase [Cu-Zn] 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD6 PE=1 SV=1 15 197 7.0E-26
sp|Q5AD05|SOD4_CANAL Cell surface superoxide dismutase [Cu-Zn] 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD4 PE=1 SV=1 37 197 6.0E-22
sp|Q5AD07|SOD5_CANAL Cell surface Cu-only superoxide dismutase 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD5 PE=1 SV=1 44 190 1.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11169
MRAASLFAASLSAGLAAAQATQDAPKISGNPTDVVYKASLPDQAFFTKGSLDGNVKGSITAQAPEDGVGVKFSVR
FENIPKEGGPFIYHIHVNPVVDGNCTKTLTHLDPFNRGEKPPCDASAPQTCQVGDLSGKYGSVTQDPFVAEYVDP
FTSLKEGDQAFFGNRSFVFHFGNTTRITCANFVKENDSQGASPSGTYGPPQPSTSASGTYGQPTRAAGGVTNIPA
GTGGVVGPANSAVPVTGSAALNKLSLPLLAAAAAAIAFVM*
Coding >Hirsu2|11169
ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC
AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC
CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC
TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCATCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGC
ACAAAGACGTTGACGCACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACG
TGCCAGGTCGGCGATCTGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCC
TTCACCTCGCTCAAGGAGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACG
CGCATCACGTGCGCCAACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCC
CAGCCCTCCACCTCGGCCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCC
GGCACCGGCGGTGTCGTCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCG
TTGCCGCTGCTGGCCGCCGCCGCTGCCGCCATCGCCTTTGTCATGTAG
Transcript >Hirsu2|11169
ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC
AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC
CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC
TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCATCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGC
ACAAAGACGTTGACGCACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACG
TGCCAGGTCGGCGATCTGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCC
TTCACCTCGCTCAAGGAGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACG
CGCATCACGTGCGCCAACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCC
CAGCCCTCCACCTCGGCCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCC
GGCACCGGCGGTGTCGTCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCG
TTGCCGCTGCTGGCCGCCGCCGCTGCCGCCATCGCCTTTGTCATGTAG
Gene >Hirsu2|11169
ATGCGCGCCGCATCTCTGTTCGCGGCCTCGCTCTCGGCCGGCCTCGCGGCCGCCCAGGCCACCCAGGACGCTCCC
AAGATCTCGGGCAACCCCACCGACGTCGTGTACAAGGCCTCGCTGCCCGACCAGGCCTTCTTCACCAAGGGCTCC
CTCGACGGCAACGTCAAGGGCTCCATCACCGCCCAGGCCCCTGAGGACGGCGTCGGCGTCAAGTTCTCAGTCCGC
TTCGAGAACATCCCCAAGGAGGGCGGCCCGTTCAGTACGTTTTTTCTCTGTTTGTTCTCGTCCCGGCCCGAGGCT
GACTCTGGCTCTTTTCAGTCTACCACATCCATGTCAACCCGGTCGTCGACGGCAACTGCACAAAGACGTTGACGC
ACCTCGATCCCTTCAACCGCGGCGAGAAGCCCCCCTGCGATGCCTCGGCCCCCCAGACGTGCCAGGTCGGCGATC
TGAGCGGCAAGTATGGCTCCGTCACGCAGGACCCCTTCGTGGCCGAGTACGTCGACCCCTTCACCTCGCTCAAGG
AGGGCGACCAGGCCTTCTTTGGCAACCGCTCCTTCGTCTTCCACTTCGGCAACACGACGCGCATCACGTGCGCCA
ACTTCGTCAAGGAAAACGACTCGCAGGGTGCCTCGCCCTCGGGCACCTACGGCCCGCCCCAGCCCTCCACCTCGG
CCTCGGGCACCTACGGCCAACCTACCCGGGCCGCCGGCGGCGTCACCAACATCCCTGCCGGCACCGGCGGTGTCG
TCGGCCCCGCCAACAGCGCCGTGCCCGTCACCGGCTCCGCCGCCCTGAACAAGCTGTCGTTGCCGCTGCTGGCCG
CCGCCGCTGCCGCCATCGCCTTTGTCATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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