© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1116 |
| Gene name | |
| Location | Contig_1235:1165..3608 |
| Strand | - |
| Gene length (bp) | 2443 |
| Transcript length (bp) | 2328 |
| Coding sequence length (bp) | 2328 |
| Protein length (aa) | 776 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.4835 | 0.906 | 0.0499 | 0.0202 | 0.1008 | 0.0147 | 0.0326 | 0.0686 | 0.0949 | 0.0022 |
| Orthofinder run ID | 4 |
| Orthogroup | 1505 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1116 MARARGACAANAGRQGREASSRAACRVADGGADSLGRQVQPSPCSSANCEVDDAFMLSLHYDQRCGQAVYGQHGQ HLAATHDGAGIDDSASSDSSNGAGFHLAVRPPAHRSPSLSSAGDLASTPPSDDGSCRGGPASAAVVPRLRPDDAD DDSRLSVLASSRQTNPAVFPSVQGSGPLPVSEASTVLPPPPSFGSAMDQDAAPFAHGNAAAEAYLDRHSDLMWDA PQAFAGANRARGGRRGGQVARGIQRRSRGRPRLETTDHDQADRRRKQIREAQRAYRQRKEQRLRDLETTVRMLER LTDRMHHEFSQFYETLIAESFLDAAPAAAQPLHAMADRFIALATMASSARQGLFDSRSSDSEDEMPPAHAVNAAS NDYFSGQLPVSPAAAYARQRHDLGGELHGAPSSTLTIHLPASISYDVVAHATPDNAGFPLYAPMQPMAHSHPGRY DGGGSLPTGVASSSSYATHEMTFGRRFQHASLEAGLRLITMPSPPVERYAAAFGFALFFESRQDIAHRLRLLLEQ MQQESLCHWRGPFAYPAGAGAPRPTPRSGPVSPVQGSDDEVLSVASQGTSTFDGHLNMATGSFGPNAEARRVESL EPRVRRLVPELDREFLGADGVETYLGRLGISVPPNATFVEAEINVADLEDGGSSSSPSADMSSTASEQVELALAA GGSVAGGMATSTAAGRTAPALVGQPASAAVDMNRMAASPGAQSAWGPCTGWSRARVAIDVHVLINEMILSSIYLG TTPRVRRTDVNRAVKLAAVPLAGSP* |
| Coding | >Hirsu2|1116 ATGGCTCGAGCCCGAGGCGCTTGTGCCGCCAATGCAGGCAGGCAGGGACGAGAGGCGTCGTCCCGCGCCGCCTGC CGTGTTGCCGACGGCGGCGCCGACAGCTTGGGTCGGCAGGTGCAACCGTCGCCTTGCAGTTCGGCCAACTGCGAG GTTGACGATGCCTTCATGCTGAGCCTGCACTATGACCAGCGTTGCGGCCAGGCGGTGTACGGCCAGCACGGCCAG CATCTCGCCGCCACTCATGACGGCGCCGGCATCGACGACAGCGCCAGCTCTGACAGCTCCAATGGCGCGGGCTTC CACCTGGCCGTGCGCCCGCCGGCCCATCGCTCGCCCTCCCTGTCCAGCGCCGGCGACCTGGCGTCGACGCCCCCC TCGGATGACGGCAGCTGCCGTGGCGGCCCGGCCTCGGCGGCCGTGGTCCCGAGGTTGCGCCCAGACGACGCCGAC GACGACTCCCGGCTGTCCGTGCTGGCCTCTTCCCGGCAGACCAATCCCGCCGTCTTCCCCTCCGTCCAGGGCTCC GGGCCTCTCCCGGTGTCCGAGGCCAGCACCGTGTTGCCTCCGCCGCCCTCGTTTGGCTCAGCAATGGACCAGGAC GCTGCGCCTTTTGCCCATGGCAACGCGGCCGCCGAGGCCTACCTTGACCGCCACTCCGACTTGATGTGGGACGCG CCCCAGGCCTTCGCGGGCGCCAACCGCGCCAGGGGCGGCCGGCGCGGCGGACAGGTCGCTAGGGGCATCCAGAGA CGCTCCCGCGGCCGGCCGCGACTTGAGACGACCGACCACGATCAGGCTGATCGTCGCCGCAAGCAGATCCGGGAA GCCCAGAGGGCTTACCGACAGCGGAAGGAGCAGAGACTTAGAGATCTCGAGACCACCGTCAGGATGCTCGAGCGG CTGACCGACAGGATGCACCATGAATTTTCCCAGTTTTATGAGACCTTGATTGCCGAGAGCTTTCTGGATGCGGCC CCTGCCGCCGCTCAGCCGTTGCACGCCATGGCAGACAGGTTCATCGCCCTGGCAACCATGGCAAGCTCGGCCCGG CAAGGCCTCTTTGATTCCCGGTCTTCCGATAGCGAGGATGAGATGCCGCCTGCACACGCTGTGAACGCGGCGTCG AATGACTATTTCTCCGGCCAGCTGCCCGTCTCCCCGGCCGCCGCCTATGCGCGCCAGAGGCACGATCTCGGGGGC GAGCTTCATGGCGCACCAAGCTCAACGCTGACAATCCACCTTCCGGCCTCCATTTCTTACGACGTCGTGGCTCAT GCGACGCCTGACAACGCTGGCTTCCCCTTGTATGCTCCGATGCAGCCGATGGCGCACAGCCATCCCGGCCGATAC GACGGCGGCGGCTCGTTGCCGACAGGCGTGGCCTCGTCGTCGTCGTATGCCACCCATGAAATGACCTTCGGCAGA CGCTTCCAACACGCTAGCCTCGAAGCCGGCCTGCGGCTCATCACGATGCCCAGCCCGCCCGTCGAACGATACGCA GCTGCCTTCGGTTTCGCCTTGTTCTTCGAGTCTCGACAGGACATTGCCCACCGTCTCAGGCTCCTGCTCGAGCAA ATGCAGCAGGAGAGCCTGTGCCATTGGAGGGGTCCCTTCGCGTATCCTGCCGGCGCCGGCGCCCCCCGCCCGACG CCGAGATCGGGCCCTGTGTCTCCGGTACAAGGGTCTGACGACGAGGTACTCTCCGTCGCGAGCCAAGGAACAAGT ACATTCGACGGGCACCTGAACATGGCCACGGGGTCCTTCGGCCCGAACGCGGAGGCCAGGCGTGTTGAAAGCCTG GAGCCCCGCGTGCGCAGGTTGGTTCCCGAACTCGACCGCGAGTTCTTGGGCGCCGACGGCGTGGAGACATACCTT GGTCGGCTCGGAATCTCTGTGCCGCCAAACGCCACTTTCGTCGAGGCGGAGATCAACGTGGCTGACCTCGAGGAC GGCGGGTCTTCATCCTCTCCCTCGGCTGACATGTCCTCGACGGCGTCAGAACAGGTAGAGCTTGCTCTTGCTGCC GGTGGCTCGGTTGCGGGAGGCATGGCAACATCGACCGCGGCCGGGAGGACAGCGCCCGCGCTCGTCGGCCAGCCG GCATCGGCGGCGGTGGACATGAACCGGATGGCGGCCTCTCCCGGGGCCCAGAGTGCTTGGGGTCCTTGCACGGGC TGGTCCCGAGCCAGAGTTGCCATTGACGTCCACGTCCTGATCAACGAGATGATACTCAGCAGCATTTACTTGGGC ACGACGCCCCGGGTCCGGCGGACGGACGTGAATCGAGCCGTCAAGCTCGCGGCCGTGCCATTGGCCGGCAGCCCA TGA |
| Transcript | >Hirsu2|1116 ATGGCTCGAGCCCGAGGCGCTTGTGCCGCCAATGCAGGCAGGCAGGGACGAGAGGCGTCGTCCCGCGCCGCCTGC CGTGTTGCCGACGGCGGCGCCGACAGCTTGGGTCGGCAGGTGCAACCGTCGCCTTGCAGTTCGGCCAACTGCGAG GTTGACGATGCCTTCATGCTGAGCCTGCACTATGACCAGCGTTGCGGCCAGGCGGTGTACGGCCAGCACGGCCAG CATCTCGCCGCCACTCATGACGGCGCCGGCATCGACGACAGCGCCAGCTCTGACAGCTCCAATGGCGCGGGCTTC CACCTGGCCGTGCGCCCGCCGGCCCATCGCTCGCCCTCCCTGTCCAGCGCCGGCGACCTGGCGTCGACGCCCCCC TCGGATGACGGCAGCTGCCGTGGCGGCCCGGCCTCGGCGGCCGTGGTCCCGAGGTTGCGCCCAGACGACGCCGAC GACGACTCCCGGCTGTCCGTGCTGGCCTCTTCCCGGCAGACCAATCCCGCCGTCTTCCCCTCCGTCCAGGGCTCC GGGCCTCTCCCGGTGTCCGAGGCCAGCACCGTGTTGCCTCCGCCGCCCTCGTTTGGCTCAGCAATGGACCAGGAC GCTGCGCCTTTTGCCCATGGCAACGCGGCCGCCGAGGCCTACCTTGACCGCCACTCCGACTTGATGTGGGACGCG CCCCAGGCCTTCGCGGGCGCCAACCGCGCCAGGGGCGGCCGGCGCGGCGGACAGGTCGCTAGGGGCATCCAGAGA CGCTCCCGCGGCCGGCCGCGACTTGAGACGACCGACCACGATCAGGCTGATCGTCGCCGCAAGCAGATCCGGGAA GCCCAGAGGGCTTACCGACAGCGGAAGGAGCAGAGACTTAGAGATCTCGAGACCACCGTCAGGATGCTCGAGCGG CTGACCGACAGGATGCACCATGAATTTTCCCAGTTTTATGAGACCTTGATTGCCGAGAGCTTTCTGGATGCGGCC CCTGCCGCCGCTCAGCCGTTGCACGCCATGGCAGACAGGTTCATCGCCCTGGCAACCATGGCAAGCTCGGCCCGG CAAGGCCTCTTTGATTCCCGGTCTTCCGATAGCGAGGATGAGATGCCGCCTGCACACGCTGTGAACGCGGCGTCG AATGACTATTTCTCCGGCCAGCTGCCCGTCTCCCCGGCCGCCGCCTATGCGCGCCAGAGGCACGATCTCGGGGGC GAGCTTCATGGCGCACCAAGCTCAACGCTGACAATCCACCTTCCGGCCTCCATTTCTTACGACGTCGTGGCTCAT GCGACGCCTGACAACGCTGGCTTCCCCTTGTATGCTCCGATGCAGCCGATGGCGCACAGCCATCCCGGCCGATAC GACGGCGGCGGCTCGTTGCCGACAGGCGTGGCCTCGTCGTCGTCGTATGCCACCCATGAAATGACCTTCGGCAGA CGCTTCCAACACGCTAGCCTCGAAGCCGGCCTGCGGCTCATCACGATGCCCAGCCCGCCCGTCGAACGATACGCA GCTGCCTTCGGTTTCGCCTTGTTCTTCGAGTCTCGACAGGACATTGCCCACCGTCTCAGGCTCCTGCTCGAGCAA ATGCAGCAGGAGAGCCTGTGCCATTGGAGGGGTCCCTTCGCGTATCCTGCCGGCGCCGGCGCCCCCCGCCCGACG CCGAGATCGGGCCCTGTGTCTCCGGTACAAGGGTCTGACGACGAGGTACTCTCCGTCGCGAGCCAAGGAACAAGT ACATTCGACGGGCACCTGAACATGGCCACGGGGTCCTTCGGCCCGAACGCGGAGGCCAGGCGTGTTGAAAGCCTG GAGCCCCGCGTGCGCAGGTTGGTTCCCGAACTCGACCGCGAGTTCTTGGGCGCCGACGGCGTGGAGACATACCTT GGTCGGCTCGGAATCTCTGTGCCGCCAAACGCCACTTTCGTCGAGGCGGAGATCAACGTGGCTGACCTCGAGGAC GGCGGGTCTTCATCCTCTCCCTCGGCTGACATGTCCTCGACGGCGTCAGAACAGGTAGAGCTTGCTCTTGCTGCC GGTGGCTCGGTTGCGGGAGGCATGGCAACATCGACCGCGGCCGGGAGGACAGCGCCCGCGCTCGTCGGCCAGCCG GCATCGGCGGCGGTGGACATGAACCGGATGGCGGCCTCTCCCGGGGCCCAGAGTGCTTGGGGTCCTTGCACGGGC TGGTCCCGAGCCAGAGTTGCCATTGACGTCCACGTCCTGATCAACGAGATGATACTCAGCAGCATTTACTTGGGC ACGACGCCCCGGGTCCGGCGGACGGACGTGAATCGAGCCGTCAAGCTCGCGGCCGTGCCATTGGCCGGCAGCCCA TGA |
| Gene | >Hirsu2|1116 ATGGCTCGAGCCCGAGGCGCTTGTGCCGCCAATGCAGGCAGGCAGGGACGAGAGGCGTCGTCCCGCGCCGCCTGC CGTGTTGCCGACGGCGGCGCCGACAGCTTGGGTCGGCAGGTGCAACCGTCGCCTTGCAGTTCGGCCAACTGCGAG GTTGACGATGCCTTCATGCTGAGCCTGCACTATGACCAGCGTTGCGGCCAGGCGGTGTACGGCCAGCACGGCCAG CATCTCGCCGCCACTCATGACGGCGCCGGCATCGACGACAGCGCCAGCTCTGACAGCTCCAATGGCGCGGGCTTC CACCTGGCCGTGCGCCCGCCGGCCCATCGCTCGCCCTCCCTGTCCAGCGCCGGCGACCTGGCGTCGACGCCCCCC TCGGATGACGGCAGCTGCCGTGGCGGCCCGGCCTCGGCGGCCGTGGTCCCGAGGTTGCGCCCAGACGACGCCGAC GACGACTCCCGGCTGTCCGTGCTGGCCTCTTCCCGGCAGACCAATCCCGCCGTCTTCCCCTCCGTCCAGGGCTCC GGGCCTCTCCCGGTGTCCGAGGCCAGCACCGTGTTGCCTCCGCCGCCCTCGTTTGGCTCAGCAATGGACCAGGAC GCTGCGCCTTTTGCCCATGGCAACGCGGCCGCCGAGGCCTACCTTGACCGCCACTCCGACTTGATGTGGGACGCG CCCCAGGCCTTCGCGGGCGCCAACCGCGCCAGGGGCGGCCGGCGCGGCGGACAGGTCGCTAGGGGCATCCAGAGA CGCTCCCGCGGCCGGCCGCGACTTGAGACGACCGACCACGATCAGGCTGATGTGAGTGGGCGCCGCCCGTGCTCG GAGCCGGACTCAATGCTAACACGACGTCAGCGTCGCCGCAAGCAGATCCGGGAAGCCCAGAGGGCTTACCGACAG CGGAAGGAGCAGAGACTTAGAGATCTCGAGACCACCGTCAGGATGCTCGAGCGGCTGACCGACAGGATGCACCAT GAATTTTCCCAGTTTTATGAGACCTTGATTGCCGAGAGCTTTCTGGATGCGGCCCCTGCCGCCGCTCAGCCGTTG CACGCCATGGCAGACAGGTTCATCGCCCTGGCAACCATGGCAAGCTCGGCCCGGCAAGGCCTCTTTGATTCCCGG TCTTCCGATAGCGAGGATGAGATGCCGCCTGCACACGCTGTGAACGCGGCGTCGAATGACTATTTCTCCGGCCAG CTGCCCGTCTCCCCGGCCGCCGCCTATGCGCGCCAGAGGCACGATCTCGGGGGCGAGCTTCATGGCGCACCAAGC TCAACGCTGACAATCCACCTTCCGGCCTCCATTTCTTACGACGTCGTGGCTCATGCGACGCCTGACAACGCTGGC TTCCCCTTGTATGCTCCGATGCAGCCGATGGCGCACAGCCATCCCGGCCGATACGACGGCGGCGGCTCGTTGCCG ACAGGCGTGGCCTCGTCGTCGTCGTATGCCACCCATGAAATGACCTTCGGCAGACGCTTCCAACACGCTAGCCTC GAAGCCGGCCTGCGGCTCATCACGATGCCCAGCCCGCCCGTCGAACGATACGCAGCTGCCTTCGGTTTCGCCTTG TTCTTCGAGTCTCGACAGGACATTGCCCACCGTCTCAGGCTCCTGCTCGAGCAAATGCAGCAGGAGAGCCTGTGC CATTGGAGGGGTCCCTTCGCGTATCCTGCCGGCGCCGGCGCCCCCCGCCCGACGCCGAGATCGGGCCCTGTGTCT CCGGTACAAGGGTCTGACGACGAGGTACTCTCCGTCGCGAGCCAAGGAACAAGTACATTCGACGGGCACCTGAAC ATGGCCACGGGGTCCTTCGGCCCGAACGCGGAGGCCAGGCGTGTTGAAAGCCTGGAGCCCCGCGTGCGCAGGTTG GTTCCCGAACTCGACCGCGAGTTCTTGGGCGCCGACGGCGTGGAGACATACCTTGGTCGGCTCGGAATCTCTGTG CCGCCAAACGCCACTTTCGTCGAGGCGGAGATCAACGTGGCTGACCTCGAGGACGGCGGGTCTTCATCCTCTCCC TCGGCTGACATGTCCTCGACGGCGTCAGAACAGGTAGAGCTTGCTCTTGCTGCCGGTGGCTCGGTTGCGGGAGGC ATGGCAACATCGACCGCGGCCGGGAGGACAGCGCCCGCGCTCGTCGGCCAGCCGGCATCGGCGGCGGTGGACATG AACCGGATGGCGGCCTCTCCCGGGGCCCAGAGTGCTTGGGGTCCTTGCACGGGCTGGTCCCGAGCCAGAGTTGCC ATTGACGTCCACGTCCTGATCAACGGTAAGACGACCGGAAGGGCACAAGACGTATGGCGGTTCGGTCGAGGCTGA CAGGGGAGCAGAGATGATACTCAGCAGCATTTACTTGGGCACGACGCCCCGGGTCCGGCGGACGGACGTGAATCG AGCCGTCAAGCTCGCGGCCGTGCCATTGGCCGGCAGCCCATGA |