Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11146
Gene name
LocationContig_972:5138..6657
Strand+
Gene length (bp)1519
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 204 226 22
2 246 268 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11146
MLAATGVAFQSVCVLSMAIHMPIHLHIHTPALRAMACRGPATGLADEEMLRSRGSGHDRRHKLVAVMYNTHPLPG
GEQSRAGAARGGRALLALPHLELTSSRLTWPGGCSPDPRPQARMTRTSSRPIKLPAGAPRRPSDACRQTGAKLAC
ASPSLSLASLLFLSHARRSNPGEGAPSTSPSRAAAAAAAAAAAAAFLPFFPCPCLALLPLLLPLLLFLPLLLLTA
SDVPSSTSPASSASSSSSPSIVVVVVVVVVVVVVVIIIIFHLSSSCFCPSPFALLTSSS*
Coding >Hirsu2|11146
ATGCTAGCGGCTACAGGGGTCGCGTTCCAGAGCGTGTGTGTCCTGAGCATGGCCATCCACATGCCCATCCACTTG
CACATCCACACTCCAGCTCTGCGTGCCATGGCCTGCAGGGGCCCTGCCACCGGACTCGCGGACGAGGAGATGCTG
CGCTCCCGAGGTAGCGGCCATGACAGGCGTCACAAGCTCGTCGCCGTCATGTACAACACACACCCGCTGCCGGGA
GGGGAGCAGAGTAGAGCAGGGGCAGCACGGGGAGGGCGCGCTCTCTTGGCCCTGCCTCACCTCGAGCTCACCTCG
TCTCGCCTCACCTGGCCCGGCGGCTGCTCGCCCGACCCAAGGCCGCAAGCACGGATGACTCGAACGTCGTCTCGT
CCTATTAAACTCCCGGCCGGAGCGCCTCGACGGCCTTCGGATGCATGCCGACAGACTGGAGCCAAGCTTGCCTGT
GCATCCCCGTCCCTGTCGCTGGCCTCGCTGCTATTTCTCTCACACGCCCGCCGCTCGAACCCGGGAGAAGGTGCC
CCGTCGACTTCACCTTCCCGCGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCCTTCCTTCCTTTCTTT
CCCTGCCCCTGCCTCGCTCTGTTGCCCCTGCTTCTGCCTCTACTACTATTCCTGCCACTACTACTACTTACTGCC
TCTGACGTTCCTTCTTCTACTTCTCCCGCCTCCTCCGCCTCATCTTCATCATCACCCTCCATTGTCGTCGTCGTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATTATCATCATCTTCCACCTCTCCTCCTCCTGCTTTTGCCCCTCC
CCTTTCGCTCTTCTCACCTCATCATCTTGA
Transcript >Hirsu2|11146
ATGCTAGCGGCTACAGGGGTCGCGTTCCAGAGCGTGTGTGTCCTGAGCATGGCCATCCACATGCCCATCCACTTG
CACATCCACACTCCAGCTCTGCGTGCCATGGCCTGCAGGGGCCCTGCCACCGGACTCGCGGACGAGGAGATGCTG
CGCTCCCGAGGTAGCGGCCATGACAGGCGTCACAAGCTCGTCGCCGTCATGTACAACACACACCCGCTGCCGGGA
GGGGAGCAGAGTAGAGCAGGGGCAGCACGGGGAGGGCGCGCTCTCTTGGCCCTGCCTCACCTCGAGCTCACCTCG
TCTCGCCTCACCTGGCCCGGCGGCTGCTCGCCCGACCCAAGGCCGCAAGCACGGATGACTCGAACGTCGTCTCGT
CCTATTAAACTCCCGGCCGGAGCGCCTCGACGGCCTTCGGATGCATGCCGACAGACTGGAGCCAAGCTTGCCTGT
GCATCCCCGTCCCTGTCGCTGGCCTCGCTGCTATTTCTCTCACACGCCCGCCGCTCGAACCCGGGAGAAGGTGCC
CCGTCGACTTCACCTTCCCGCGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCCTTCCTTCCTTTCTTT
CCCTGCCCCTGCCTCGCTCTGTTGCCCCTGCTTCTGCCTCTACTACTATTCCTGCCACTACTACTACTTACTGCC
TCTGACGTTCCTTCTTCTACTTCTCCCGCCTCCTCCGCCTCATCTTCATCATCACCCTCCATTGTCGTCGTCGTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATTATCATCATCTTCCACCTCTCCTCCTCCTGCTTTTGCCCCTCC
CCTTTCGCTCTTCTCACCTCATCATCTTGA
Gene >Hirsu2|11146
ATGCTAGCGGCTACAGGGGTCGCGTTCCAGAGCGTGTGTGTCCTGAGCATGGCCATCCACATGCCCATCCACTTG
CACATCCACACTCCAGCTCTGCGTGCCATGGCCTGCAGGGGCCCTGCCACCGGACTCGCGGACGAGGAGATGCTG
CGCTCCCGAGGTAGCGGCCATGACAGGCGTCACAAGCTCGTCGCCGTCATGTACAACACACACCCGCTGCCGGGA
GGGGAGCAGAGTAGAGCAGGGGCAGCACGGGGAGGGCGCGCTCTCTTGGCCCTGCCTCACCTCGAGCTCACCTCG
TCTCGCCTCACCTGGCCCGGCGGCTGCTCGCCCGACCCAAGGCCGCAAGCACGGATGACTCGAGTAAGTCGTCTC
CGGCCGCGACCGGTATCTGCCTGCCGTGCCTACCGACTCTGCCGTCGCCGTCTCCGTCCGACGCCTCTCCTTGGC
CGGCGAGCGAGAAGGGGGGCAGGGGAGATGGGGGGAGGGGAAGAGAGCGGAGGGCAGAGAGCCAGAGGGGGGGAG
GCAATCGAGTCCCGCTGCCCTCCACAGCAGCCTGCTCTCTCCCATGTGGGATGTGTGGGCAGCAAATTAGCCTAC
AGGGCCCTTGGAGCGTTCGGGAACCTTCAAGGACTCGCTCTCGAGGCTAACGATGACCACTACCCGCCTACGGAG
CGGCCTACCCGCCCGCCTGCCCGCCTGCCTACCAGGGAAGACGGCTGCTGCTGAACGGGGGCAAGGCTCGAGAGG
AAGAATGAGGAGGAGCGGAGGAGGGGGGAACCACCCCCCCTTCTCTCTCAAGATCCGTCCCCCTTCCATCCATCC
ATCCTTCGTCCGGAGCGCACAGCGGCTCCAGTACCCTCTCGGAATATCCTCCAGCGCGGCAAAGGCTGGCCTCGT
CCTGCTCTCCACCGCCGCGTCCTTCTCATAATGATAGCATAGGCCCTGAGACGCCAATAGGAGCTCCGCCCTCCC
GCCGCTCCATCCCTTACCCATCCTCAGCTCGCTTCCATCCTCGGCTGCTTAGACGTCGTCTCGTCCTATTAAACT
CCCGGCCGGAGCGCCTCGACGGCCTTCGGATGCATGCCGACAGACTGGAGCCAAGCTTGCCTGTGCATCCCCGTC
CCTGTCGCTGGCCTCGCTGCTATTTCTCTCACACGCCCGCCGCTCGAACCCGGGAGAAGGTGCCCCGTCGACTTC
ACCTTCCCGCGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCCTTCCTTCCTTTCTTTCCCTGCCCCTG
CCTCGCTCTGTTGCCCCTGCTTCTGCCTCTACTACTATTCCTGCCACTACTACTACTTACTGCCTCTGACGTTCC
TTCTTCTACTTCTCCCGCCTCCTCCGCCTCATCTTCATCATCACCCTCCATTGTCGTCGTCGTCGTCGTCGTCGT
CGTCGTCGTCGTCGTCGTCATTATCATCATCTTCCACCTCTCCTCCTCCTGCTTTTGCCCCTCCCCTTTCGCTCT
TCTCACCTCATCATCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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