© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1113 |
| Gene name | |
| Location | Contig_1233:5898..6720 |
| Strand | - |
| Gene length (bp) | 822 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5848 | 0.4446 | 0.263 | 0.1018 | 0.2702 | 0.1489 | 0.1505 | 0.297 | 0.2439 | 0.0396 |
| Orthofinder run ID | 4 |
| Orthogroup | 7484 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|637 |
| Ophiocordyceps subramaniannii | Hirsu2|1113 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1113 MQGHTRPRLPSPPQSPHPLPGPPDTQAGGRYEGPAVGSWRAADESSGSCGLFCPLARLCDATMPPEELGGAGLCT FPSCRGGFANASPMWPQAPTTSSAPALSPSPSPSPSPPPPRRPRRRPPAACLVPRRPCLQLGLTTCSGWTALSLV GGTPVRDRTGPLAALQASVSLASSRSSRTVDSATGLDLTWGSILHGRAIPSVIRPPSSSVGRPPSIRPPWAVRHP PASTTASTTASTTASTTIHHHPPASGACALALPSPPRRRDRDISVHVP* |
| Coding | >Hirsu2|1113 ATGCAAGGCCACACACGGCCACGCCTCCCCTCCCCTCCACAATCCCCTCATCCCTTGCCTGGCCCGCCCGACACA CAGGCCGGCGGCCGCTACGAGGGCCCTGCCGTCGGTAGCTGGCGTGCTGCAGATGAATCTTCTGGCTCCTGCGGC TTATTTTGCCCACTGGCTCGCCTCTGCGACGCAACCATGCCGCCAGAGGAGCTCGGTGGAGCTGGCCTGTGCACG TTTCCGTCATGCAGAGGAGGGTTTGCCAACGCATCGCCAATGTGGCCCCAAGCGCCGACGACGTCGTCCGCTCCG GCGCTCTCGCCCTCGCCCTCGCCCTCGCCCTCGCCCCCTCCCCCTCGCCGCCCTCGTCGCCGTCCCCCGGCCGCC TGCCTCGTCCCTCGTCGTCCGTGTCTGCAATTGGGGCTAACGACTTGTTCTGGTTGGACAGCGCTCTCCTTGGTC GGCGGGACCCCCGTCAGAGACAGGACAGGGCCCTTGGCCGCGCTGCAGGCCTCTGTTTCGCTCGCTTCTTCCCGC TCTAGTCGCACTGTCGATAGCGCAACGGGACTCGATCTCACGTGGGGCTCCATTCTCCACGGCCGAGCCATCCCA TCCGTCATCCGTCCGCCATCCAGCAGCGTCGGCCGTCCGCCATCCATCCGTCCACCTTGGGCCGTCCGCCATCCA CCAGCGTCCACCACAGCGTCCACCACGGCGTCCACCACAGCGTCCACCACCATTCACCACCATCCACCAGCCTCG GGGGCCTGCGCGCTGGCCCTCCCCTCACCCCCCCGTCGGCGCGACCGCGACATCAGCGTGCATGTACCCTGA |
| Transcript | >Hirsu2|1113 ATGCAAGGCCACACACGGCCACGCCTCCCCTCCCCTCCACAATCCCCTCATCCCTTGCCTGGCCCGCCCGACACA CAGGCCGGCGGCCGCTACGAGGGCCCTGCCGTCGGTAGCTGGCGTGCTGCAGATGAATCTTCTGGCTCCTGCGGC TTATTTTGCCCACTGGCTCGCCTCTGCGACGCAACCATGCCGCCAGAGGAGCTCGGTGGAGCTGGCCTGTGCACG TTTCCGTCATGCAGAGGAGGGTTTGCCAACGCATCGCCAATGTGGCCCCAAGCGCCGACGACGTCGTCCGCTCCG GCGCTCTCGCCCTCGCCCTCGCCCTCGCCCTCGCCCCCTCCCCCTCGCCGCCCTCGTCGCCGTCCCCCGGCCGCC TGCCTCGTCCCTCGTCGTCCGTGTCTGCAATTGGGGCTAACGACTTGTTCTGGTTGGACAGCGCTCTCCTTGGTC GGCGGGACCCCCGTCAGAGACAGGACAGGGCCCTTGGCCGCGCTGCAGGCCTCTGTTTCGCTCGCTTCTTCCCGC TCTAGTCGCACTGTCGATAGCGCAACGGGACTCGATCTCACGTGGGGCTCCATTCTCCACGGCCGAGCCATCCCA TCCGTCATCCGTCCGCCATCCAGCAGCGTCGGCCGTCCGCCATCCATCCGTCCACCTTGGGCCGTCCGCCATCCA CCAGCGTCCACCACAGCGTCCACCACGGCGTCCACCACAGCGTCCACCACCATTCACCACCATCCACCAGCCTCG GGGGCCTGCGCGCTGGCCCTCCCCTCACCCCCCCGTCGGCGCGACCGCGACATCAGCGTGCATGTACCCTGA |
| Gene | >Hirsu2|1113 ATGCAAGGCCACACACGGCCACGCCTCCCCTCCCCTCCACAATCCCCTCATCCCTTGCCTGGCCCGCCCGACACA CAGGCCGGCGGCCGCTACGAGGGCCCTGCCGTCGGTAGCTGGCGTGCTGCAGATGAATCTTCTGGCTCCTGCGGC TTATTTTGCCCACTGGCTCGCCTCTGCGACGCAACCATGCCGCCAGAGGAGCTCGGTGGAGCTGGCCTGTGCACG TTTCCGTCATGCAGAGGAGGGTTTGCCAACGCATCGCCAATGTGGCCCCAAGCGCCGACGACGTCGTCCGCTCCG GCGCTCTCGCCCTCGCCCTCGCCCTCGCCCTCGCCCCCTCCCCCTCGCCGCCCTCGTCGCCGTCCCCCGGCCGCC TGCCTCGTCCCTCGTCGTCCGTGTCTGCAATTGGGGCTAACGACTTGTTCTGGTTGGACAGCGCTCTCCTTGGTC GGCGGGACCCCCGTCAGAGACAGGACAGGGCCCTTGGCCGCGCTGCAGGCCTCTGTTTCGCTCGCTTCTTCCCGC TCTAGTCGCACTGTCGATAGCGCAACGGGACTCGATCTCACGTGGGGCTCCATTCTCCACGGCCGAGCCATCCCA TCCGTCATCCGTCCGCCATCCAGCAGCGTCGGCCGTCCGCCATCCATCCGTCCACCTTGGGCCGTCCGCCATCCA CCAGCGTCCACCACAGCGTCCACCACGGCGTCCACCACAGCGTCCACCACCATTCACCACCATCCACCAGCCTCG GGGGCCTGCGCGCTGGCCCTCCCCTCACCCCCCCGTCGGCGCGACCGCGACATCAGCGTGCATGTACCCTGA |