Protein ID | Hirsu2|1111 |
Gene name | |
Location | Contig_1233:2029..2431 |
Strand | - |
Gene length (bp) | 402 |
Transcript length (bp) | 402 |
Coding sequence length (bp) | 402 |
Protein length (aa) | 134 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.3999 | 0.3859 | 0.6795 | 0.0477 | 0.1108 | 0.0457 | 0.1424 | 0.1255 | 0.0397 | 0.0468 |
Orthofinder run ID | 4 |
Orthogroup | 13 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1111 MVESRGGRIRYRSDSDLFRGVSAQLDDLAGAEVNLDDVKQLEGVLDAWPVHLATVPEVEIQGQAAGRHHPEERRR RGLQSHRKHDETAWTHVLTQVDKLRREGFAGTGVKIAVVDTGVGPLPCRDTYCLPDLC* |
Coding | >Hirsu2|1111 ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC ACCTATTGCCTGCCGGATCTCTGCTAA |
Transcript | >Hirsu2|1111 ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC ACCTATTGCCTGCCGGATCTCTGCTAA |
Gene | >Hirsu2|1111 ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC ACCTATTGCCTGCCGGATCTCTGCTAA |