Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1111
Gene name
LocationContig_1233:2029..2431
Strand-
Gene length (bp)402
Transcript length (bp)402
Coding sequence length (bp)402
Protein length (aa) 134

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.3999 0.3859 0.6795 0.0477 0.1108 0.0457 0.1424 0.1255 0.0397 0.0468

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup13
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|899
Ophiocordyceps australis 1348a (Ghana) OphauG2|6186
Ophiocordyceps australis 1348a (Ghana) OphauG2|5995
Ophiocordyceps australis 1348a (Ghana) OphauG2|2920
Ophiocordyceps australis 1348a (Ghana) OphauG2|2766
Ophiocordyceps australis 1348a (Ghana) OphauG2|2711
Ophiocordyceps australis map64 (Brazil) OphauB2|5626
Ophiocordyceps australis map64 (Brazil) OphauB2|247
Ophiocordyceps australis map64 (Brazil) OphauB2|2915
Ophiocordyceps australis map64 (Brazil) OphauB2|4024
Ophiocordyceps camponoti-floridani Ophcf2|06941
Ophiocordyceps camponoti-floridani Ophcf2|06362
Ophiocordyceps camponoti-rufipedis Ophun1|6441
Ophiocordyceps camponoti-rufipedis Ophun1|2138
Ophiocordyceps kimflemingae Ophio5|4117
Ophiocordyceps kimflemingae Ophio5|496
Ophiocordyceps kimflemingae Ophio5|5244
Ophiocordyceps subramaniannii Hirsu2|6708
Ophiocordyceps subramaniannii Hirsu2|5374
Ophiocordyceps subramaniannii Hirsu2|4743
Ophiocordyceps subramaniannii Hirsu2|4682
Ophiocordyceps subramaniannii Hirsu2|4026
Ophiocordyceps subramaniannii Hirsu2|1356
Ophiocordyceps subramaniannii Hirsu2|11115
Ophiocordyceps subramaniannii Hirsu2|1111 (this protein)
Ophiocordyceps subramaniannii Hirsu2|10934

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1111
MVESRGGRIRYRSDSDLFRGVSAQLDDLAGAEVNLDDVKQLEGVLDAWPVHLATVPEVEIQGQAAGRHHPEERRR
RGLQSHRKHDETAWTHVLTQVDKLRREGFAGTGVKIAVVDTGVGPLPCRDTYCLPDLC*
Coding >Hirsu2|1111
ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG
GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG
CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT
CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC
AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC
ACCTATTGCCTGCCGGATCTCTGCTAA
Transcript >Hirsu2|1111
ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG
GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG
CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT
CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC
AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC
ACCTATTGCCTGCCGGATCTCTGCTAA
Gene >Hirsu2|1111
ATGGTGGAGAGCCGGGGCGGCCGGATACGCTACCGCTCCGACTCGGACTTGTTCCGCGGCGTCTCGGCCCAGCTG
GACGACCTCGCGGGGGCGGAGGTGAACCTCGACGATGTGAAGCAGCTCGAGGGCGTCCTTGACGCTTGGCCGGTG
CACCTGGCGACGGTGCCCGAGGTGGAGATCCAGGGCCAGGCCGCCGGCCGGCACCACCCAGAGGAGCGGCGCCGT
CGTGGTCTGCAGAGCCACCGGAAGCACGACGAGACCGCGTGGACTCACGTCTTGACGCAGGTCGACAAGCTGCGC
AGAGAGGGCTTCGCGGGCACCGGTGTCAAGATTGCCGTCGTCGATACTGGTGTCGGTCCCCTTCCCTGCCGTGAC
ACCTATTGCCTGCCGGATCTCTGCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail