Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|111
Gene name
LocationContig_1016:3889..5484
Strand+
Gene length (bp)1595
Transcript length (bp)1245
Coding sequence length (bp)1245
Protein length (aa) 415

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 50 72 22
3 92 114 22
4 127 149 22
5 173 195 22
6 208 230 22
7 250 269 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|111
MADTNVDLSQDLGYSMVIPCLVLLPLTWISVALRTYARAVLTKSFKIDDWFMVIAQVIFTITCAMTLAGVSRGLG
KHNAAVPNAADRVAALMWQAIATAIYILNMMFVKLSIGVFLLRLAVWTVYQWILWISLIIVTLWSLGIFIWDIFQ
CIPVAKQWDFRIEHGHCASPNAIISSTIALSVLTVGSDWLYAILPIPMMWNVKMTKQAKVTVIVILGLGIFASVA
TLIRLRYLGGLQQPEDLMYTASNAMLWTIVEPGVAIFASSLATIRPLLRLCKIRGFGSRTQSSRTLAGSADDRKM
STRQETCNFSDISLNEVIDTDPPGPPDAPANVGGLSLDMPSSPGACHKDVESGLRDESKGDVFAVEGNNNRQASW
QSEDSAMPTVNEIDDLEAQSPHKSDFDLDLDDPRSFYEK*
Coding >Hirsu2|111
ATGGCCGACACTAATGTCGATCTCAGCCAGGATCTCGGGTACTCCATGGTGATACCATGTCTAGTGCTGCTGCCT
CTGACTTGGATATCCGTTGCGCTGCGCACGTATGCAAGAGCAGTATTGACCAAGAGCTTCAAGATCGACGACTGG
TTCATGGTCATTGCCCAAGTTATCTTCACCATCACTTGCGCCATGACCTTGGCCGGTGTCAGCAGAGGACTGGGA
AAACATAATGCGGCCGTTCCGAATGCCGCAGATCGAGTAGCGGCTCTCATGTGGCAAGCCATTGCGACGGCGATC
TACATCCTCAACATGATGTTCGTCAAACTCAGCATCGGCGTATTCTTGCTCCGGTTGGCCGTCTGGACCGTATAC
CAATGGATCCTCTGGATCAGTCTGATCATAGTTACGCTTTGGAGCTTGGGGATATTTATCTGGGACATCTTTCAG
TGCATTCCGGTTGCCAAGCAATGGGATTTTCGAATCGAACACGGTCACTGCGCTTCTCCTAATGCCATCATCTCG
TCTACCATTGCTCTTAGCGTCCTGACCGTCGGATCAGATTGGCTCTATGCGATTCTACCGATTCCCATGATGTGG
AATGTCAAGATGACAAAACAGGCAAAGGTGACAGTCATTGTCATTCTCGGCCTCGGCATTTTTGCCAGCGTCGCC
ACTCTCATCAGGCTAAGGTACTTGGGCGGGCTGCAACAGCCAGAGGACTTGATGTACACTGCGAGCAACGCCATG
TTATGGACGATTGTCGAGCCCGGTGTTGCCATATTTGCTTCGAGCTTGGCGACGATCCGGCCGCTGCTGCGCCTA
TGCAAGATCCGAGGATTCGGTTCCCGAACACAGAGCTCTAGGACCCTGGCCGGCAGTGCAGATGACAGGAAGATG
TCGACCCGGCAGGAGACGTGCAACTTCAGCGACATATCATTGAACGAGGTCATCGATACTGACCCCCCCGGCCCG
CCGGACGCACCAGCCAACGTCGGTGGTCTGTCGCTCGACATGCCGTCGAGCCCGGGTGCCTGCCACAAAGACGTC
GAGAGCGGGTTGCGCGACGAGTCCAAAGGCGACGTCTTTGCGGTGGAGGGCAATAACAACCGGCAGGCGAGCTGG
CAGAGCGAGGATTCGGCCATGCCGACGGTGAACGAGATCGACGACTTGGAGGCCCAAAGTCCACACAAGAGCGAC
TTCGACCTCGACCTCGACGACCCCCGCAGCTTTTACGAGAAATGA
Transcript >Hirsu2|111
ATGGCCGACACTAATGTCGATCTCAGCCAGGATCTCGGGTACTCCATGGTGATACCATGTCTAGTGCTGCTGCCT
CTGACTTGGATATCCGTTGCGCTGCGCACGTATGCAAGAGCAGTATTGACCAAGAGCTTCAAGATCGACGACTGG
TTCATGGTCATTGCCCAAGTTATCTTCACCATCACTTGCGCCATGACCTTGGCCGGTGTCAGCAGAGGACTGGGA
AAACATAATGCGGCCGTTCCGAATGCCGCAGATCGAGTAGCGGCTCTCATGTGGCAAGCCATTGCGACGGCGATC
TACATCCTCAACATGATGTTCGTCAAACTCAGCATCGGCGTATTCTTGCTCCGGTTGGCCGTCTGGACCGTATAC
CAATGGATCCTCTGGATCAGTCTGATCATAGTTACGCTTTGGAGCTTGGGGATATTTATCTGGGACATCTTTCAG
TGCATTCCGGTTGCCAAGCAATGGGATTTTCGAATCGAACACGGTCACTGCGCTTCTCCTAATGCCATCATCTCG
TCTACCATTGCTCTTAGCGTCCTGACCGTCGGATCAGATTGGCTCTATGCGATTCTACCGATTCCCATGATGTGG
AATGTCAAGATGACAAAACAGGCAAAGGTGACAGTCATTGTCATTCTCGGCCTCGGCATTTTTGCCAGCGTCGCC
ACTCTCATCAGGCTAAGGTACTTGGGCGGGCTGCAACAGCCAGAGGACTTGATGTACACTGCGAGCAACGCCATG
TTATGGACGATTGTCGAGCCCGGTGTTGCCATATTTGCTTCGAGCTTGGCGACGATCCGGCCGCTGCTGCGCCTA
TGCAAGATCCGAGGATTCGGTTCCCGAACACAGAGCTCTAGGACCCTGGCCGGCAGTGCAGATGACAGGAAGATG
TCGACCCGGCAGGAGACGTGCAACTTCAGCGACATATCATTGAACGAGGTCATCGATACTGACCCCCCCGGCCCG
CCGGACGCACCAGCCAACGTCGGTGGTCTGTCGCTCGACATGCCGTCGAGCCCGGGTGCCTGCCACAAAGACGTC
GAGAGCGGGTTGCGCGACGAGTCCAAAGGCGACGTCTTTGCGGTGGAGGGCAATAACAACCGGCAGGCGAGCTGG
CAGAGCGAGGATTCGGCCATGCCGACGGTGAACGAGATCGACGACTTGGAGGCCCAAAGTCCACACAAGAGCGAC
TTCGACCTCGACCTCGACGACCCCCGCAGCTTTTACGAGAAATGA
Gene >Hirsu2|111
ATGGCCGACACTAATGTCGATCTCAGCCAGGATCTCGGGTACTCCATGGTGATACCATGTCTAGTGCTGCTGCCT
CTGACTTGGATATCCGTTGCGCTGCGCACGTATGCAAGAGCAGTATTGACCAAGAGCTTCAAGATCGACGACTGG
TTCATGGTCATTGCCCAAGTTCGTCCTTTGCCGCGGCCCCCTCCCTTGCCCGTCGGGACATGAAGCGCTGACGGC
TATCTCAGGTTATCTTCACCATCACTTGCGCCATGACCTTGGCCGGTGTCAGCAGAGGACTGGGAAAACATAATG
CGGCCGTTCCGAATGCCGCAGATCGAGTAGCGGCTCTCATGGTAGGTCCTTGCGCGATGATAGCATACGGCGACT
GTCTCCAGCTGCTAACTCTCGCAAAGTGGCAAGCCATTGCGACGGCGATCTACATCCTCAACATGATGTTCGTCA
AACTCAGCATCGGCGTATTCTTGCTCCGGTTGGCCGTCTGGACCGTATACCAATGGATCCTCTGGATCAGTCTGA
TCATAGTTACGCTTTGGAGCTTGGGGATATTTATCTGGGACATCTTTCAGTGCATTCCGGTTGCCAAGCAATGGG
ATTTTCGAATCGAACACGGTCACTGCGCTTCTCCTAATGCCATCATCTCGTCTACCATTGCTCTTAGCGTCCTGA
CCGTCGGATCAGATTGGCTCTATGTCAGTTTCCCGCTTCAGGGCAACGCCGATGCGAATGGCTGACAGGCGACGC
ACAGGCGATTCTACCGATTCCCATGATGTGGAATGTCAAGATGACAAAACAGGCAAAGGTGACAGTCATTGTCAT
TCTCGGCCTCGGCATTTTGTACGAGCCTGCTCCGCGTCACAGTCCCCCCCCCCCTGCCCCCTTTCTCGGGAACAG
ACTTGGTCATATGCGTCTGGATACCTAATGTGCGAGAGACTGACTCCGGACAGTGCCAGCGTCGCCACTCTCATC
AGGCTAAGGTACTTGGGCGGGCTGCAACAGCCAGAGGACTTGATGTGTAAGAGGTACTCCGGCCGCGAGCGCGAC
ACGTCTTGTGATCTAATGATCCGGCTTCAGACACTGCGAGCAACGCCATGTTATGGACGATTGTCGAGCCCGGTG
TTGCCATATTTGCTTCGAGCTTGGCGACGATCCGGCCGCTGCTGCGCCTATGCAAGATCCGAGGATTCGGTTCCC
GAACACAGAGCTCTAGGACCCTGGCCGGCAGTGCAGATGACAGGAAGATGTCGACCCGGCAGGAGACGTGCAACT
TCAGCGACATATCATTGAACGAGGTCATCGATACTGACCCCCCCGGCCCGCCGGACGCACCAGCCAACGTCGGTG
GTCTGTCGCTCGACATGCCGTCGAGCCCGGGTGCCTGCCACAAAGACGTCGAGAGCGGGTTGCGCGACGAGTCCA
AAGGCGACGTCTTTGCGGTGGAGGGCAATAACAACCGGCAGGCGAGCTGGCAGAGCGAGGATTCGGCCATGCCGA
CGGTGAACGAGATCGACGACTTGGAGGCCCAAAGTCCACACAAGAGCGACTTCGACCTCGACCTCGACGACCCCC
GCAGCTTTTACGAGAAATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail