© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|11090 |
| Gene name | |
| Location | Contig_96:35495..36219 |
| Strand | + |
| Gene length (bp) | 724 |
| Transcript length (bp) | 315 |
| Coding sequence length (bp) | 315 |
| Protein length (aa) | 105 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02939 | UcrQ | UcrQ family | 7.0E-35 | 24 | 99 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P48503|QCR8_NEUCR | Cytochrome b-c1 complex subunit 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qcr-8 PE=1 SV=1 | 1 | 104 | 4.0E-41 |
| sp|P08525|QCR8_YEAST | Cytochrome b-c1 complex subunit 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR8 PE=1 SV=2 | 20 | 100 | 1.0E-16 |
| sp|P49346|QCR8_KLULA | Cytochrome b-c1 complex subunit 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=QCR8 PE=3 SV=1 | 20 | 100 | 7.0E-16 |
| sp|P50523|QCR8_SCHPO | Cytochrome b-c1 complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr8 PE=3 SV=1 | 20 | 97 | 2.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | Yes |
| GO:0005750 | mitochondrial respiratory chain complex III | Yes |
| GO:0032991 | protein-containing complex | No |
| GO:0098796 | membrane protein complex | No |
| GO:0008150 | biological_process | No |
| GO:0098803 | respiratory chain complex | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0045333 | cellular respiration | No |
| GO:1990351 | transporter complex | No |
| GO:0070069 | cytochrome complex | No |
| GO:0009060 | aerobic respiration | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0045275 | respiratory chain complex III | No |
| GO:0022904 | respiratory electron transport chain | No |
| GO:1902495 | transmembrane transporter complex | No |
| GO:0022900 | electron transport chain | No |
| GO:0019646 | aerobic electron transport chain | No |
| GO:1990204 | oxidoreductase complex | No |
| GO:1902494 | catalytic complex | No |
| GO:0015980 | energy derivation by oxidation of organic compounds | No |
| GO:0006091 | generation of precursor metabolites and energy | No |
| GO:0005575 | cellular_component | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 84 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|11090 MRPTQALYGGGAPNWKIGHFIGDWGSIGGAKQKGIITYGVSANRLNPFAGIVHDAVFNTFRRTKGQIFYWLPSVM LGYYLMNWASERNEYLNSKAGRAEFADAE* |
| Coding | >Hirsu2|11090 ATGAGACCGACGCAAGCTCTGTACGGCGGCGGCGCGCCCAACTGGAAAATCGGCCATTTCATTGGCGATTGGGGC TCAATCGGCGGCGCCAAGCAAAAGGGTATCATCACGTACGGCGTCTCGGCCAACCGACTCAACCCGTTTGCCGGC ATTGTGCACGACGCCGTCTTCAACACCTTCCGCCGCACCAAGGGCCAGATCTTCTACTGGCTGCCTTCCGTCATG CTCGGCTACTACCTCATGAACTGGGCCTCTGAACGCAACGAGTACCTGAACTCCAAGGCGGGCCGCGCCGAGTTC GCCGACGCGGAGTAA |
| Transcript | >Hirsu2|11090 ATGAGACCGACGCAAGCTCTGTACGGCGGCGGCGCGCCCAACTGGAAAATCGGCCATTTCATTGGCGATTGGGGC TCAATCGGCGGCGCCAAGCAAAAGGGTATCATCACGTACGGCGTCTCGGCCAACCGACTCAACCCGTTTGCCGGC ATTGTGCACGACGCCGTCTTCAACACCTTCCGCCGCACCAAGGGCCAGATCTTCTACTGGCTGCCTTCCGTCATG CTCGGCTACTACCTCATGAACTGGGCCTCTGAACGCAACGAGTACCTGAACTCCAAGGCGGGCCGCGCCGAGTTC GCCGACGCGGAGTAA |
| Gene | >Hirsu2|11090 ATGAGACCGACGCAAGCTCTGTACGGCGGCGGCGCGCCCAACTGGAAAATCGGCCAGTTCGTGTTCCCCTGCGCC CGCCCGAGGCTGCAACCCGAGGCCGCGGCCTGTCATCGGATGGCCTCGGGTGGCATCTCGGGACCCTTTTTTTTT CTTGGACTCTGCTTGGAACTGCGTTGGAAGTTACGGAAGCTGACAGAGGCCGGTATAGTTTCATTGGCGATTGGG GCTCAATCGGTTAGTCCTCCTGTTCCTTTCGCTCGAGTGCCTGCTGCGCGGTCAAGGAGGGCGGACCGGCCCCAA GCTGGCAGGCCGCTCCATCCGCACCCGCCGGGCCCGTCGACGAGGTCCCGAAGCGAATCGAGCCGGACGACGACG CATTCCGCGGCAGCGTTTGGGGAGTGGACGGAGGCGTGCTGACGGGCCGCAGGCGGCGCCAAGCAAAAGGGTATC ATCACGTACGGCGTCTCGGCCAACCGACTCAACCCGTTTGCCGGCATTGTGCACGACGCCGTCTTCAACACCTTC CGCCGCACCAAGGGCCAGATCTTCTACTGGCTGCCTTCCGTCATGCTCGGCTACTACCTCATGAACTGGGCCTCT GAACGGTAGGATCCAACCCTGGCCCCCGGAGGAGGTGAGGACGCGGTCGATGGCTGACGTTTTTGCCAGCAACGA GTACCTGAACTCCAAGGCGGGCCGCGCCGAGTTCGCCGACGCGGAGTAA |