Protein ID | Hirsu2|1108 |
Gene name | |
Location | Contig_1232:107..1235 |
Strand | - |
Gene length (bp) | 1128 |
Transcript length (bp) | 1128 |
Coding sequence length (bp) | 1128 |
Protein length (aa) | 376 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16483 | Glyco_hydro_64 | Beta-1,3-glucanase | 3.6E-137 | 6 | 371 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P22222|E13B_CELCE | Glucan endo-1,3-beta-glucosidase OS=Cellulosimicrobium cellulans PE=1 SV=1 | 6 | 365 | 3.0E-39 |
sp|Q59146|E13B_ARTSW | Glucan endo-1,3-beta-glucosidase OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1 | 6 | 365 | 6.0E-39 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.5664 | 0.532 | 0.5979 | 0.0991 | 0.1338 | 0.0127 | 0.0663 | 0.0529 | 0.0409 | 0.0035 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH64 | 1.6E-112 | 6 | 372 |
Orthofinder run ID | 4 |
Orthogroup | 4868 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1108 MAVGATLDVVLRNDTGAAQLYAHITGSDDKGLVMMAADGKTVHRPVSPSGTLQPVGADCTIKVGSPGSARTVRIP RISGARIWFAKDKPLIFFVNPGPALVEPSATNPTDPNYDLDWAFCEFTWNQQELYANVSFVDFVGLPISLELQTG DGHVKKVPGLPSDGLEKVCAKLEEQARHDGRGWNKLVIRGSGGAALRALSPNAGGVLQPGLFDGYYQAYVDSVWA KYAAEDLTVDTQFTWGRVKGRVRDGKLTFEGVASFDKPSAVDIFSCSTGPFAGGPGVTPERLNLGARIVAALNRS TLLVNANQPEGERVELYYRERVTNHFARICHQTSVEGRGYAFPYDDVSSSTGVDQSGFVNDPNPRQLTVGVGRPL * |
Coding | >Hirsu2|1108 ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG TAA |
Transcript | >Hirsu2|1108 ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG TAA |
Gene | >Hirsu2|1108 ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG TAA |