Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1108
Gene name
LocationContig_1232:107..1235
Strand-
Gene length (bp)1128
Transcript length (bp)1128
Coding sequence length (bp)1128
Protein length (aa) 376

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16483 Glyco_hydro_64 Beta-1,3-glucanase 3.6E-137 6 371

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P22222|E13B_CELCE Glucan endo-1,3-beta-glucosidase OS=Cellulosimicrobium cellulans PE=1 SV=1 6 365 3.0E-39
sp|Q59146|E13B_ARTSW Glucan endo-1,3-beta-glucosidase OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1 6 365 6.0E-39

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5664 0.532 0.5979 0.0991 0.1338 0.0127 0.0663 0.0529 0.0409 0.0035

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH64 1.6E-112 6 372

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4868
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1575
Ophiocordyceps australis map64 (Brazil) OphauB2|827
Ophiocordyceps camponoti-floridani Ophcf2|05653
Ophiocordyceps camponoti-rufipedis Ophun1|808
Ophiocordyceps kimflemingae Ophio5|1949
Ophiocordyceps subramaniannii Hirsu2|1108 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1108
MAVGATLDVVLRNDTGAAQLYAHITGSDDKGLVMMAADGKTVHRPVSPSGTLQPVGADCTIKVGSPGSARTVRIP
RISGARIWFAKDKPLIFFVNPGPALVEPSATNPTDPNYDLDWAFCEFTWNQQELYANVSFVDFVGLPISLELQTG
DGHVKKVPGLPSDGLEKVCAKLEEQARHDGRGWNKLVIRGSGGAALRALSPNAGGVLQPGLFDGYYQAYVDSVWA
KYAAEDLTVDTQFTWGRVKGRVRDGKLTFEGVASFDKPSAVDIFSCSTGPFAGGPGVTPERLNLGARIVAALNRS
TLLVNANQPEGERVELYYRERVTNHFARICHQTSVEGRGYAFPYDDVSSSTGVDQSGFVNDPNPRQLTVGVGRPL
*
Coding >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA
Transcript >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA
Gene >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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