Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1108
Gene name
LocationContig_1232:107..1235
Strand-
Gene length (bp)1128
Transcript length (bp)1128
Coding sequence length (bp)1128
Protein length (aa) 376

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16483 Glyco_hydro_64 Beta-1,3-glucanase 2.2E-131 6 371

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P22222|E13B_CELCE Glucan endo-1,3-beta-glucosidase OS=Cellulosimicrobium cellulans PE=1 SV=1 6 365 3.0E-39
sp|Q59146|E13B_ARTSW Glucan endo-1,3-beta-glucosidase OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1 6 365 6.0E-39

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1108
MAVGATLDVVLRNDTGAAQLYAHITGSDDKGLVMMAADGKTVHRPVSPSGTLQPVGADCTIKVGSPGSARTVRIP
RISGARIWFAKDKPLIFFVNPGPALVEPSATNPTDPNYDLDWAFCEFTWNQQELYANVSFVDFVGLPISLELQTG
DGHVKKVPGLPSDGLEKVCAKLEEQARHDGRGWNKLVIRGSGGAALRALSPNAGGVLQPGLFDGYYQAYVDSVWA
KYAAEDLTVDTQFTWGRVKGRVRDGKLTFEGVASFDKPSAVDIFSCSTGPFAGGPGVTPERLNLGARIVAALNRS
TLLVNANQPEGERVELYYRERVTNHFARICHQTSVEGRGYAFPYDDVSSSTGVDQSGFVNDPNPRQLTVGVGRPL
*
Coding >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA
Transcript >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA
Gene >Hirsu2|1108
ATGGCCGTAGGCGCCACGCTCGACGTCGTCCTGCGCAATGACACCGGAGCCGCGCAGCTGTATGCCCATATCACG
GGGTCCGACGATAAGGGCCTTGTCATGATGGCCGCAGACGGCAAGACAGTGCACCGGCCCGTGTCGCCCAGCGGG
ACGCTGCAGCCGGTCGGCGCCGACTGCACCATCAAAGTCGGCAGCCCTGGCAGCGCCCGCACCGTCCGGATCCCG
CGTATCTCGGGCGCCCGCATCTGGTTCGCCAAGGACAAGCCGCTGATCTTCTTCGTCAACCCGGGTCCGGCGTTG
GTGGAGCCGTCGGCGACGAATCCGACGGACCCCAACTACGACCTCGACTGGGCCTTTTGCGAGTTCACGTGGAAC
CAGCAGGAGCTGTACGCCAACGTGTCCTTCGTTGACTTCGTCGGACTGCCCATCTCTCTCGAGCTCCAGACGGGC
GACGGGCACGTAAAGAAGGTGCCCGGCCTGCCGTCGGACGGCCTTGAGAAGGTGTGCGCCAAGCTGGAGGAGCAA
GCCAGGCACGACGGCAGGGGATGGAACAAGCTTGTGATTCGAGGCAGCGGCGGGGCCGCCCTGCGCGCCCTCAGT
CCCAACGCGGGCGGCGTGCTGCAGCCCGGCCTGTTCGACGGCTACTACCAGGCCTACGTCGACTCCGTTTGGGCC
AAGTATGCGGCCGAGGACCTGACAGTCGATACCCAGTTCACCTGGGGCCGGGTCAAAGGCCGGGTCAGGGACGGC
AAACTGACGTTCGAGGGCGTAGCGTCCTTCGACAAGCCGTCTGCCGTCGACATCTTCAGCTGCAGCACGGGGCCC
TTTGCCGGCGGCCCCGGCGTGACGCCCGAGAGGCTTAACCTCGGGGCGCGCATCGTCGCGGCTCTAAACCGCTCT
ACGCTCCTCGTCAACGCGAACCAGCCCGAGGGCGAGAGGGTGGAGCTCTACTACCGCGAGCGGGTGACGAACCAC
TTTGCGCGCATCTGCCACCAGACGAGCGTTGAGGGCCGGGGCTACGCCTTTCCTTACGACGACGTCAGCTCCTCC
ACTGGCGTGGACCAGTCGGGCTTCGTCAACGACCCTAACCCTAGGCAGTTGACGGTCGGCGTGGGAAGGCCCCTG
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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