Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|11061
Gene name
Location	Contig_956:6702..7850
Strand	+
Gene length (bp)	1148
Transcript length (bp)	957
Coding sequence length (bp)	957
Protein length (aa)	319

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06772	LtrA	Bacterial low temperature requirement A protein (LtrA)	8.2E-31	41	281

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	105	124	19
2	134	156	22
3	165	187	22
4	191	213	22
5	234	256	22
6	260	282	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|11061 MNCNELQQGSKGSRYLIKRPKALQWFHNGRLYKESDEERQAGRFELFLDLLYVAIVANFSDDLAENPDGFHVAKY MLIFVPAWHLWSDMREIMNSYYNDDIVQRLTILWIMALLVLYANNARLVDSDIAALRTTAAAYVIARFTSASVFL ISSFASFQHRTQARILAGFMFSGLLFTVPLFFEAVSLRAKAAITVAMILYSECTWALTLSPFIKRRLRLEYSTAV DIAHEIDRLAAFEIIILGEFVYSVIVGGPAGIGLTAGYAKALCVLVIAFCLNWIYHLDSSSFTFLFLHPCSSVDT LVLSARSCTNSRMASDGF*
Coding	>Hirsu2\|11061 ATGAACTGCAACGAGCTCCAACAAGGCTCCAAGGGGTCACGTTACCTCATTAAGCGTCCTAAAGCGCTGCAATGG TTCCACAACGGCCGCCTCTACAAGGAGAGCGACGAAGAGCGGCAGGCTGGTCGATTTGAACTGTTTCTCGACTTG CTTTATGTAGCCATCGTCGCCAACTTCAGCGACGACCTTGCGGAGAACCCGGACGGCTTCCATGTGGCCAAATAC ATGCTCATCTTCGTCCCAGCCTGGCATCTTTGGTCAGACATGAGGGAAATCATGAATTCGTATTACAACGACGAT ATTGTCCAACGCCTGACGATCCTCTGGATCATGGCGTTGCTTGTTCTCTACGCCAACAACGCGCGACTTGTTGAC AGCGACATCGCCGCGCTCCGCACCACCGCTGCAGCCTATGTCATTGCTCGCTTCACGTCCGCGTCTGTCTTTCTC ATCAGCTCATTCGCCAGCTTCCAACATCGCACCCAAGCGCGTATCCTGGCCGGCTTCATGTTTTCGGGCCTCCTT TTCACCGTGCCACTCTTCTTCGAAGCCGTTAGCCTCCGGGCCAAGGCGGCGATAACGGTGGCCATGATACTTTAC AGCGAATGTACCTGGGCTCTGACCCTGAGCCCGTTCATTAAGCGGCGATTGCGCCTTGAATACAGCACCGCCGTC GATATTGCTCATGAGATCGATCGTCTCGCCGCCTTTGAGATCATAATCCTGGGCGAATTCGTATACAGTGTCATC GTGGGCGGCCCAGCGGGCATTGGCCTTACTGCCGGCTACGCCAAGGCCCTTTGTGTGCTTGTTATAGCCTTCTGC CTGAACTGGATCTACCATTTGGATTCTTCCTCCTTCACCTTCCTCTTTCTGCATCCCTGCTCATCGGTGGACACA TTGGTGCTGTCAGCACGAAGCTGCACCAATTCGAGGATGGCCAGCGATGGCTTCTAG
Transcript	>Hirsu2\|11061 ATGAACTGCAACGAGCTCCAACAAGGCTCCAAGGGGTCACGTTACCTCATTAAGCGTCCTAAAGCGCTGCAATGG TTCCACAACGGCCGCCTCTACAAGGAGAGCGACGAAGAGCGGCAGGCTGGTCGATTTGAACTGTTTCTCGACTTG CTTTATGTAGCCATCGTCGCCAACTTCAGCGACGACCTTGCGGAGAACCCGGACGGCTTCCATGTGGCCAAATAC ATGCTCATCTTCGTCCCAGCCTGGCATCTTTGGTCAGACATGAGGGAAATCATGAATTCGTATTACAACGACGAT ATTGTCCAACGCCTGACGATCCTCTGGATCATGGCGTTGCTTGTTCTCTACGCCAACAACGCGCGACTTGTTGAC AGCGACATCGCCGCGCTCCGCACCACCGCTGCAGCCTATGTCATTGCTCGCTTCACGTCCGCGTCTGTCTTTCTC ATCAGCTCATTCGCCAGCTTCCAACATCGCACCCAAGCGCGTATCCTGGCCGGCTTCATGTTTTCGGGCCTCCTT TTCACCGTGCCACTCTTCTTCGAAGCCGTTAGCCTCCGGGCCAAGGCGGCGATAACGGTGGCCATGATACTTTAC AGCGAATGTACCTGGGCTCTGACCCTGAGCCCGTTCATTAAGCGGCGATTGCGCCTTGAATACAGCACCGCCGTC GATATTGCTCATGAGATCGATCGTCTCGCCGCCTTTGAGATCATAATCCTGGGCGAATTCGTATACAGTGTCATC GTGGGCGGCCCAGCGGGCATTGGCCTTACTGCCGGCTACGCCAAGGCCCTTTGTGTGCTTGTTATAGCCTTCTGC CTGAACTGGATCTACCATTTGGATTCTTCCTCCTTCACCTTCCTCTTTCTGCATCCCTGCTCATCGGTGGACACA TTGGTGCTGTCAGCACGAAGCTGCACCAATTCGAGGATGGCCAGCGATGGCTTCTAG
Gene	>Hirsu2\|11061 ATGAACTGCAACGAGCTCCAACAAGGCTCCAAGGGGTCACGTTACCTCATTAAGCGTCCTAAAGCGCTGCAATGG TTCCACAACGGCCGCCTCTACAAGGAGAGCGACGAAGAGCGGCAGGCTGGTCGATTTGAACTGTTTCTCGACTTG CTTTGTGAGTAAACAGAGGACGATGCCAGGCCCGTAGCTACGCCTCCCGGGTTTCATAGAAAGCCTTGGGACAGA TGACAGAACGGAACAGCTGACTCCAGTGCCGTCGTTGTTTTTTTCTGTGACTTCACTACCAGATGTAGCCATCGT CGCCAACTTCAGCGACGACCTTGCGGAGAACCCGGACGGCTTCCATGTGGCCAAATACATGCTCATCTTCGTCCC AGCCTGGCATCTTTGGTCAGACATGAGGGAAATCATGAATTCGTATTACAACGACGATATTGTCCAACGCCTGAC GATCCTCTGGATCATGGCGTTGCTTGTTCTCTACGCCAACAACGCGCGACTTGTTGACAGCGACATCGCCGCGCT CCGCACCACCGCTGCAGCCTATGTCATTGCTCGCTTCACGTCCGCGTCTGTCTTTCTCATCAGCTCATTCGCCAG CTTCCAACATCGCACCCAAGCGCGTATCCTGGCCGGCTTCATGTTTTCGGGCCTCCTTTTCACCGTGCCACTCTT CTTCGAAGCCGTTAGCCTCCGGGCCAAGGCGGCGATAACGGTGGCCATGATACTTTACAGCGAATGTACCTGGGC TCTGACCCTGAGCCCGTTCATTAAGCGGCGATTGCGCCTTGAATACAGCACCGCCGTCGATATTGCTCATGAGAT CGATCGTCTCGCCGCCTTTGAGATCATAATCCTGGGCGAATTCGTATACAGTGTCATCGTGGGCGGCCCAGCGGG CATTGGCCTTACTGCCGGCTACGCCAAGGCCCTTTGTGTGCTTGTTATAGCCTTCTGCCTGAACTGGATCTACGT GAGCGGAGACGGCAGCGTGAGGTCCACGCATCCCATTCGGCGCTCGGCATGGACAGCATTTGGATTCTTCCTCCT TCACCTTCCTCTTTCTGCATCCCTGCTCATCGGTGGACACATTGGTGCTGTCAGCACGAAGCTGCACCAATTCGA GGATGGCCAGCGATGGCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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