© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|11052 |
| Gene name | |
| Location | Contig_953:5222..6941 |
| Strand | - |
| Gene length (bp) | 1719 |
| Transcript length (bp) | 1719 |
| Coding sequence length (bp) | 1719 |
| Protein length (aa) | 573 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 1.3E-08 | 230 | 278 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10274|TEB1_SCHPO | Telobox protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=teb1 PE=1 SV=1 | 221 | 442 | 2.0E-14 |
| sp|Q6C9I6|TAY1_YARLI | telomere-associated protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TAY1 PE=1 SV=1 | 215 | 285 | 6.0E-14 |
| sp|Q6C9I6|TAY1_YARLI | telomere-associated protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TAY1 PE=1 SV=1 | 361 | 442 | 2.0E-09 |
| sp|C0HIA3|SMH6_MAIZE | Single myb histone 6 OS=Zea mays GN=SMH6 PE=2 SV=1 | 229 | 277 | 6.0E-08 |
| sp|Q8W119|SMH4_MAIZE | Single myb histone 4 OS=Zea mays GN=SMH4 PE=2 SV=1 | 229 | 292 | 7.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10274|TEB1_SCHPO | Telobox protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=teb1 PE=1 SV=1 | 221 | 442 | 2.0E-14 |
| sp|Q6C9I6|TAY1_YARLI | telomere-associated protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TAY1 PE=1 SV=1 | 215 | 285 | 6.0E-14 |
| sp|Q6C9I6|TAY1_YARLI | telomere-associated protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TAY1 PE=1 SV=1 | 361 | 442 | 2.0E-09 |
| sp|C0HIA3|SMH6_MAIZE | Single myb histone 6 OS=Zea mays GN=SMH6 PE=2 SV=1 | 229 | 277 | 6.0E-08 |
| sp|Q8W119|SMH4_MAIZE | Single myb histone 4 OS=Zea mays GN=SMH4 PE=2 SV=1 | 229 | 292 | 7.0E-07 |
| sp|Q9FJW5|TRB2_ARATH | Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2 PE=1 SV=1 | 229 | 297 | 7.0E-07 |
| sp|Q9M2X3|TRB3_ARATH | Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3 PE=1 SV=1 | 229 | 348 | 8.0E-07 |
| sp|Q6WLH4|SMH3_MAIZE | Single myb histone 3 OS=Zea mays GN=SMH3 PE=2 SV=1 | 229 | 280 | 2.0E-06 |
| sp|Q8VWK4|TRB1_ARATH | Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1 PE=1 SV=1 | 229 | 277 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|11052 MATIEPRLIHLLNESTTPQIQHADLPPLYALPLPTPSERALPPLEPDASHRPDRYAVDAAAFSLSLPADDAAAIH RKDDGRWEGRYAAASSAYPLRLLLGESDLAEPSSHTHAKILNEPMDAPDEAYNKKRARNLNVKDDFVQLPQPMKK QKAAKQALAMPPIINGLHEPPPHAALFPPIASNSFSQAEGSQMTLLRDMGRGAEDKSITPASSDADRNANRARKR ATKPRRKWSEEETKHLLLGVNRHGVGKWTTILEDPDFTFNDRTAGDLKDRFRTCCPVELRGAGKNSLPDSPPPPP PREPNVKAKKGIHSENILIEADNPPPEDDNGTQPAVPPPAPPPPPPLPPQQGSETAPKQKKSRAHRKKMEDLAEL GIHGPFKKSLRRERRPFTDQDDREILDGLDIYGPAWTKIQRDPRFHLSSRQPTDLRDRVRNKYPGVYQRIEKGTF QTKDESRGNDILEPSIKISINDSLKRPKATTGHKSSKDEAHTWPLQMIESSGYMQPPPSFEFGEVSAPQFMGGEM DISRLLLDDSRLGQMPARHGIDGVSGPPSPFASEHRRERPGAHTVKC* |
| Coding | >Hirsu2|11052 ATGGCCACCATCGAGCCACGCCTCATCCATCTGCTGAATGAGTCGACGACGCCCCAGATCCAGCACGCCGACCTC CCGCCACTCTACGCCCTGCCGCTGCCGACGCCCTCGGAGCGCGCCCTCCCGCCGCTCGAGCCCGACGCGAGCCAC CGCCCTGACCGGTATGCCGTCGACGCGGCCGCCTTCTCGCTCTCGCTGCCCGCCGACGATGCCGCCGCCATCCAC CGCAAGGACGACGGCCGGTGGGAGGGCCGGTACGCGGCCGCCTCGTCCGCCTACCCCCTGCGGCTGCTGTTGGGC GAATCCGACCTGGCCGAGCCGTCCTCCCACACGCACGCCAAGATCCTCAACGAGCCGATGGATGCGCCCGACGAA GCCTACAACAAGAAGCGAGCGCGAAACCTCAACGTCAAGGACGACTTCGTCCAGCTGCCTCAGCCGATGAAGAAG CAAAAGGCCGCCAAGCAGGCGCTGGCCATGCCCCCCATCATCAACGGCCTGCACGAGCCTCCTCCGCACGCCGCC CTCTTCCCGCCCATCGCCTCCAACTCCTTTAGCCAGGCCGAGGGCTCCCAGATGACGCTTCTGCGCGACATGGGC CGCGGCGCCGAAGACAAGAGCATCACGCCCGCGTCGTCAGACGCCGACAGGAATGCGAACAGGGCCAGGAAGCGC GCGACGAAGCCCCGGAGGAAGTGGTCCGAGGAGGAGACCAAGCATCTGCTCCTTGGTGTCAACCGCCATGGCGTC GGGAAGTGGACCACCATCCTCGAGGACCCCGACTTCACCTTCAACGACCGCACCGCCGGCGACCTCAAGGATCGG TTCAGGACCTGCTGCCCTGTCGAGCTTCGCGGCGCGGGCAAGAACTCGCTGCCCGACTCGCCGCCGCCGCCGCCG CCGCGCGAGCCCAACGTCAAAGCAAAAAAGGGGATCCACTCTGAGAACATACTCATCGAGGCGGACAATCCGCCG CCCGAGGACGACAACGGAACTCAACCGGCTGTTCCTCCTCCCGCTCCCCCCCCCCCTCCCCCGCTTCCCCCGCAG CAAGGTTCCGAGACGGCGCCCAAGCAGAAAAAGAGCCGGGCACACCGCAAAAAGATGGAGGACCTGGCCGAGTTG GGTATCCACGGGCCCTTCAAGAAGTCTCTCCGGCGCGAGCGGCGCCCCTTCACCGACCAGGACGATCGCGAAATC TTGGACGGCCTCGACATCTACGGCCCCGCCTGGACCAAGATCCAGCGCGACCCCCGCTTCCACCTCTCGAGCAGG CAGCCCACCGACCTGCGAGATCGGGTGCGGAACAAATATCCCGGCGTATACCAGCGCATCGAGAAGGGCACCTTC CAGACCAAAGACGAGAGCCGAGGCAACGACATCCTCGAGCCTTCGATCAAGATATCGATCAACGACTCGCTCAAG AGGCCCAAGGCGACGACGGGCCACAAGAGCTCCAAGGACGAGGCGCATACCTGGCCTCTGCAGATGATAGAGTCC TCGGGCTACATGCAGCCTCCGCCGAGCTTCGAGTTCGGCGAGGTGAGCGCGCCCCAGTTTATGGGCGGCGAGATG GACATTTCTAGACTTCTTCTAGACGATTCGAGGTTGGGCCAGATGCCTGCGCGACACGGCATCGACGGCGTCTCC GGTCCGCCGTCGCCCTTCGCCTCGGAGCATCGGCGAGAACGCCCGGGGGCCCACACGGTCAAGTGCTGA |
| Transcript | >Hirsu2|11052 ATGGCCACCATCGAGCCACGCCTCATCCATCTGCTGAATGAGTCGACGACGCCCCAGATCCAGCACGCCGACCTC CCGCCACTCTACGCCCTGCCGCTGCCGACGCCCTCGGAGCGCGCCCTCCCGCCGCTCGAGCCCGACGCGAGCCAC CGCCCTGACCGGTATGCCGTCGACGCGGCCGCCTTCTCGCTCTCGCTGCCCGCCGACGATGCCGCCGCCATCCAC CGCAAGGACGACGGCCGGTGGGAGGGCCGGTACGCGGCCGCCTCGTCCGCCTACCCCCTGCGGCTGCTGTTGGGC GAATCCGACCTGGCCGAGCCGTCCTCCCACACGCACGCCAAGATCCTCAACGAGCCGATGGATGCGCCCGACGAA GCCTACAACAAGAAGCGAGCGCGAAACCTCAACGTCAAGGACGACTTCGTCCAGCTGCCTCAGCCGATGAAGAAG CAAAAGGCCGCCAAGCAGGCGCTGGCCATGCCCCCCATCATCAACGGCCTGCACGAGCCTCCTCCGCACGCCGCC CTCTTCCCGCCCATCGCCTCCAACTCCTTTAGCCAGGCCGAGGGCTCCCAGATGACGCTTCTGCGCGACATGGGC CGCGGCGCCGAAGACAAGAGCATCACGCCCGCGTCGTCAGACGCCGACAGGAATGCGAACAGGGCCAGGAAGCGC GCGACGAAGCCCCGGAGGAAGTGGTCCGAGGAGGAGACCAAGCATCTGCTCCTTGGTGTCAACCGCCATGGCGTC GGGAAGTGGACCACCATCCTCGAGGACCCCGACTTCACCTTCAACGACCGCACCGCCGGCGACCTCAAGGATCGG TTCAGGACCTGCTGCCCTGTCGAGCTTCGCGGCGCGGGCAAGAACTCGCTGCCCGACTCGCCGCCGCCGCCGCCG CCGCGCGAGCCCAACGTCAAAGCAAAAAAGGGGATCCACTCTGAGAACATACTCATCGAGGCGGACAATCCGCCG CCCGAGGACGACAACGGAACTCAACCGGCTGTTCCTCCTCCCGCTCCCCCCCCCCCTCCCCCGCTTCCCCCGCAG CAAGGTTCCGAGACGGCGCCCAAGCAGAAAAAGAGCCGGGCACACCGCAAAAAGATGGAGGACCTGGCCGAGTTG GGTATCCACGGGCCCTTCAAGAAGTCTCTCCGGCGCGAGCGGCGCCCCTTCACCGACCAGGACGATCGCGAAATC TTGGACGGCCTCGACATCTACGGCCCCGCCTGGACCAAGATCCAGCGCGACCCCCGCTTCCACCTCTCGAGCAGG CAGCCCACCGACCTGCGAGATCGGGTGCGGAACAAATATCCCGGCGTATACCAGCGCATCGAGAAGGGCACCTTC CAGACCAAAGACGAGAGCCGAGGCAACGACATCCTCGAGCCTTCGATCAAGATATCGATCAACGACTCGCTCAAG AGGCCCAAGGCGACGACGGGCCACAAGAGCTCCAAGGACGAGGCGCATACCTGGCCTCTGCAGATGATAGAGTCC TCGGGCTACATGCAGCCTCCGCCGAGCTTCGAGTTCGGCGAGGTGAGCGCGCCCCAGTTTATGGGCGGCGAGATG GACATTTCTAGACTTCTTCTAGACGATTCGAGGTTGGGCCAGATGCCTGCGCGACACGGCATCGACGGCGTCTCC GGTCCGCCGTCGCCCTTCGCCTCGGAGCATCGGCGAGAACGCCCGGGGGCCCACACGGTCAAGTGCTGA |
| Gene | >Hirsu2|11052 ATGGCCACCATCGAGCCACGCCTCATCCATCTGCTGAATGAGTCGACGACGCCCCAGATCCAGCACGCCGACCTC CCGCCACTCTACGCCCTGCCGCTGCCGACGCCCTCGGAGCGCGCCCTCCCGCCGCTCGAGCCCGACGCGAGCCAC CGCCCTGACCGGTATGCCGTCGACGCGGCCGCCTTCTCGCTCTCGCTGCCCGCCGACGATGCCGCCGCCATCCAC CGCAAGGACGACGGCCGGTGGGAGGGCCGGTACGCGGCCGCCTCGTCCGCCTACCCCCTGCGGCTGCTGTTGGGC GAATCCGACCTGGCCGAGCCGTCCTCCCACACGCACGCCAAGATCCTCAACGAGCCGATGGATGCGCCCGACGAA GCCTACAACAAGAAGCGAGCGCGAAACCTCAACGTCAAGGACGACTTCGTCCAGCTGCCTCAGCCGATGAAGAAG CAAAAGGCCGCCAAGCAGGCGCTGGCCATGCCCCCCATCATCAACGGCCTGCACGAGCCTCCTCCGCACGCCGCC CTCTTCCCGCCCATCGCCTCCAACTCCTTTAGCCAGGCCGAGGGCTCCCAGATGACGCTTCTGCGCGACATGGGC CGCGGCGCCGAAGACAAGAGCATCACGCCCGCGTCGTCAGACGCCGACAGGAATGCGAACAGGGCCAGGAAGCGC GCGACGAAGCCCCGGAGGAAGTGGTCCGAGGAGGAGACCAAGCATCTGCTCCTTGGTGTCAACCGCCATGGCGTC GGGAAGTGGACCACCATCCTCGAGGACCCCGACTTCACCTTCAACGACCGCACCGCCGGCGACCTCAAGGATCGG TTCAGGACCTGCTGCCCTGTCGAGCTTCGCGGCGCGGGCAAGAACTCGCTGCCCGACTCGCCGCCGCCGCCGCCG CCGCGCGAGCCCAACGTCAAAGCAAAAAAGGGGATCCACTCTGAGAACATACTCATCGAGGCGGACAATCCGCCG CCCGAGGACGACAACGGAACTCAACCGGCTGTTCCTCCTCCCGCTCCCCCCCCCCCTCCCCCGCTTCCCCCGCAG CAAGGTTCCGAGACGGCGCCCAAGCAGAAAAAGAGCCGGGCACACCGCAAAAAGATGGAGGACCTGGCCGAGTTG GGTATCCACGGGCCCTTCAAGAAGTCTCTCCGGCGCGAGCGGCGCCCCTTCACCGACCAGGACGATCGCGAAATC TTGGACGGCCTCGACATCTACGGCCCCGCCTGGACCAAGATCCAGCGCGACCCCCGCTTCCACCTCTCGAGCAGG CAGCCCACCGACCTGCGAGATCGGGTGCGGAACAAATATCCCGGCGTATACCAGCGCATCGAGAAGGGCACCTTC CAGACCAAAGACGAGAGCCGAGGCAACGACATCCTCGAGCCTTCGATCAAGATATCGATCAACGACTCGCTCAAG AGGCCCAAGGCGACGACGGGCCACAAGAGCTCCAAGGACGAGGCGCATACCTGGCCTCTGCAGATGATAGAGTCC TCGGGCTACATGCAGCCTCCGCCGAGCTTCGAGTTCGGCGAGGTGAGCGCGCCCCAGTTTATGGGCGGCGAGATG GACATTTCTAGACTTCTTCTAGACGATTCGAGGTTGGGCCAGATGCCTGCGCGACACGGCATCGACGGCGTCTCC GGTCCGCCGTCGCCCTTCGCCTCGGAGCATCGGCGAGAACGCCCGGGGGCCCACACGGTCAAGTGCTGA |