Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1103
Gene name
LocationContig_1231:11..559
Strand-
Gene length (bp)548
Transcript length (bp)366
Coding sequence length (bp)366
Protein length (aa) 122

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11559 ADIP Afadin- and alpha -actinin-Binding 4.3E-23 9 119

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1103
MIDTENLCTASQYINNQLVSRGLLRDGQAIDFAHGGGGDAQGSAANAGRIISIVNDLILRRDRDADQRESLSVAI
RNLRAENVKQATDLARLADKKAEEERRADAAGAAEAALRTQLRRRG*
Coding >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT
CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG
CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Transcript >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT
CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG
CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Gene >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATGTAAGCAATCTTCCCTCCCCACCGATCCCGCACCGGGAA
ACCTTGCTTCGTGCAGAGAAGAAGGATGGCAGGCGGCGAGAGAGGATGGGCGGGGGGGGGGGGCAGCAGGGGCTG
ACCAGACGTTTTTCTCTTCACTGTCACGCAGCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATTCGGAA
CCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAGCGGCG
GGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGTCGGCCGAGGCGCAGGCGCGCAGCCT
GAGGGAGGAGGCGGCGCGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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