Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1103
Gene name
LocationContig_1231:11..559
Strand-
Gene length (bp)548
Transcript length (bp)366
Coding sequence length (bp)366
Protein length (aa) 122

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11559 ADIP Afadin- and alpha -actinin-Binding 4.3E-23 9 119

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6294 0.5058 0.1169 0.0926 0.1718 0.0023 0.0382 0.0713 0.041 0.0716

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1459
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4533
Ophiocordyceps australis map64 (Brazil) OphauB2|5390
Ophiocordyceps camponoti-floridani Ophcf2|00764
Ophiocordyceps camponoti-rufipedis Ophun1|1362
Ophiocordyceps kimflemingae Ophio5|4456
Ophiocordyceps subramaniannii Hirsu2|1103 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1103
MIDTENLCTASQYINNQLVSRGLLRDGQAIDFAHGGGGDAQGSAANAGRIISIVNDLILRRDRDADQRESLSVAI
RNLRAENVKQATDLARLADKKAEEERRADAAGAAEAALRTQLRRRG*
Coding >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT
CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG
CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Transcript >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT
CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG
CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Gene >Hirsu2|1103
ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC
GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC
ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATGTAAGCAATCTTCCCTCCCCACCGATCCCGCACCGGGAA
ACCTTGCTTCGTGCAGAGAAGAAGGATGGCAGGCGGCGAGAGAGGATGGGCGGGGGGGGGGGGCAGCAGGGGCTG
ACCAGACGTTTTTCTCTTCACTGTCACGCAGCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATTCGGAA
CCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAGCGGCG
GGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGTCGGCCGAGGCGCAGGCGCGCAGCCT
GAGGGAGGAGGCGGCGCGGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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