Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1103
Gene name
Location	Contig_1231:11..559
Strand	-
Gene length (bp)	548
Transcript length (bp)	366
Coding sequence length (bp)	366
Protein length (aa)	122

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11559	ADIP	Afadin- and alpha -actinin-Binding	4.3E-23	9	119

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1103 MIDTENLCTASQYINNQLVSRGLLRDGQAIDFAHGGGGDAQGSAANAGRIISIVNDLILRRDRDADQRESLSVAI RNLRAENVKQATDLARLADKKAEEERRADAAGAAEAALRTQLRRRG*
Coding	>Hirsu2\|1103 ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Transcript	>Hirsu2\|1103 ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATT CGGAACCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAG CGGCGGGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGCGGCGCGGATGA
Gene	>Hirsu2\|1103 ATGATCGACACGGAGAACCTGTGCACGGCCTCGCAGTACATCAACAACCAGCTCGTCTCCCGGGGGCTGCTTCGC GATGGCCAGGCCATAGACTTTGCCCACGGCGGCGGCGGCGACGCACAAGGCTCGGCCGCCAACGCCGGGCGCATC ATCAGCATCGTCAACGACCTGATCCTGCGGCGCGATGTAAGCAATCTTCCCTCCCCACCGATCCCGCACCGGGAA ACCTTGCTTCGTGCAGAGAAGAAGGATGGCAGGCGGCGAGAGAGGATGGGCGGGGGGGGGGGGCAGCAGGGGCTG ACCAGACGTTTTTCTCTTCACTGTCACGCAGCGCGATGCCGACCAGCGCGAGTCGCTCTCCGTCGCCATTCGGAA CCTCCGCGCCGAGAACGTCAAGCAGGCGACGGACCTGGCGCGCCTGGCGGACAAGAAGGCAGAGGAGGAGCGGCG GGCGGACGCGGCGGGCGCGGCCGAGGCGGCGCTCCGGACGCAGCTGCGGTCGGCCGAGGCGCAGGCGCGCAGCCT GAGGGAGGAGGCGGCGCGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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