Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11018
Gene name
LocationContig_947:1041..2283
Strand+
Gene length (bp)1242
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 1.1E-10 127 165
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 6.0E-05 218 268
PF12740 Chlorophyllase2 Chlorophyllase enzyme 1.2E-06 128 249

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AZY1|A1751_ARTBC Probable 1-alkyl-2-acetylglycerophosphocholine esterase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01751 PE=1 SV=1 1 370 1.0E-26
sp|Q28017|PAFA_BOVIN Platelet-activating factor acetylhydrolase OS=Bos taurus GN=PLA2G7 PE=2 SV=1 127 273 6.0E-13
sp|Q13093|PAFA_HUMAN Platelet-activating factor acetylhydrolase OS=Homo sapiens GN=PLA2G7 PE=1 SV=1 127 273 6.0E-13
sp|Q99487|PAFA2_HUMAN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Homo sapiens GN=PAFAH2 PE=1 SV=1 119 263 7.0E-10
sp|Q60963|PAFA_MOUSE Platelet-activating factor acetylhydrolase OS=Mus musculus GN=Pla2g7 PE=2 SV=2 127 359 2.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|D4AZY1|A1751_ARTBC Probable 1-alkyl-2-acetylglycerophosphocholine esterase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01751 PE=1 SV=1 1 370 1.0E-26
sp|Q28017|PAFA_BOVIN Platelet-activating factor acetylhydrolase OS=Bos taurus GN=PLA2G7 PE=2 SV=1 127 273 6.0E-13
sp|Q13093|PAFA_HUMAN Platelet-activating factor acetylhydrolase OS=Homo sapiens GN=PLA2G7 PE=1 SV=1 127 273 6.0E-13
sp|Q99487|PAFA2_HUMAN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Homo sapiens GN=PAFAH2 PE=1 SV=1 119 263 7.0E-10
sp|Q60963|PAFA_MOUSE Platelet-activating factor acetylhydrolase OS=Mus musculus GN=Pla2g7 PE=2 SV=2 127 359 2.0E-09
sp|P79106|PAFA2_BOVIN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Bos taurus GN=PAFAH2 PE=1 SV=1 120 263 6.0E-09
sp|P83006|PAFA2_RAT Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus GN=Pafah2 PE=1 SV=2 129 263 1.0E-07
sp|Q8VDG7|PAFA2_MOUSE Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Mus musculus GN=Pafah2 PE=1 SV=2 129 263 3.0E-07
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GO

GO Term Description Terminal node
GO:0016042 lipid catabolic process Yes
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity Yes
GO:1901575 organic substance catabolic process No
GO:0006629 lipid metabolic process No
GO:0052689 carboxylic ester hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No
GO:0009056 catabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2369 0.1503 0.746 0.1828 0.2059 0.2706 0.4172 0.515 0.3472 0.2429

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999763

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4863
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|04603
Ophiocordyceps camponoti-rufipedis Ophun1|2883
Ophiocordyceps kimflemingae Ophio5|1697
Ophiocordyceps subramaniannii Hirsu2|11018 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4499

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11018
MLLLPVVVVAAVLAAVQAVRVPGPTGPYPVAMRVQQLTDQRRLDPYAPPGRPHKRRILVSVFLPLDPGRFADGPV
QSVPYMPPRTAALYGDEAVRESPLPRDFFSRLTIDFSQFPKNGSTSDEGHRRRYPVVLFSHGLGGSRLLHTAAAR
DIASQGYVVMTIDHPYDASYVEFPDGSEVRGANISTMPAIIRSVQVRAADVSFLVDQLHDSAALQRLTAGMAGGV
DADKVVVCGHSLGGATSAAVMANDSRIAGGLDLDGHIIGPVADEGFDRPFALVGKPGRGQTAGSKWPELYSRLRG
PKMELAVAETEHLSFFDVPLLLTTAKVADGDRPRLDAALGRVNGRRLRGITMGIFTAFLDLVFRGKADGLRNLDK
DFCGVSVVKSELPQGS*
Coding >Hirsu2|11018
ATGCTGCTGCTGCCCGTTGTCGTCGTCGCGGCTGTCCTGGCGGCCGTCCAGGCCGTTCGGGTCCCCGGCCCGACG
GGTCCGTATCCGGTCGCGATGCGAGTCCAGCAGCTGACGGACCAGCGGCGCCTCGACCCGTACGCGCCCCCGGGC
AGGCCTCACAAGAGGCGCATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCCGGGCGCTTCGCCGACGGCCCCGTG
CAGAGCGTGCCATACATGCCGCCCCGCACCGCGGCTCTGTACGGCGACGAGGCTGTCAGAGAGTCTCCCCTGCCC
CGGGATTTCTTTTCCCGCCTCACCATCGACTTCTCGCAGTTTCCCAAGAACGGCAGCACGAGCGACGAGGGCCAC
CGGCGGCGATACCCCGTTGTCCTCTTCTCACACGGGCTCGGCGGGTCGAGACTGCTGCACACGGCTGCCGCGCGG
GACATCGCCAGCCAGGGCTATGTGGTGATGACCATCGACCATCCTTACGACGCCTCCTATGTGGAATTCCCCGAC
GGCTCCGAGGTCCGCGGCGCCAACATATCGACGATGCCGGCCATCATTCGGTCGGTCCAGGTTCGCGCGGCAGAC
GTCTCGTTCCTCGTCGATCAGCTGCACGACTCGGCGGCTCTGCAGCGGCTAACGGCCGGGATGGCCGGCGGCGTC
GACGCGGACAAGGTGGTCGTCTGCGGGCACTCGCTGGGGGGCGCGACGAGCGCGGCCGTCATGGCCAACGACAGC
CGCATCGCGGGGGGCCTGGACCTGGACGGGCACATCATCGGGCCGGTCGCCGACGAGGGCTTCGACAGGCCGTTT
GCGCTGGTGGGAAAGCCCGGGCGCGGGCAGACGGCCGGGTCCAAGTGGCCCGAGCTGTACTCTCGCCTGCGGGGG
CCCAAGATGGAGCTGGCCGTGGCCGAGACGGAGCACCTGTCGTTCTTCGACGTGCCGCTGCTGCTGACGACGGCC
AAGGTGGCCGACGGCGACCGGCCCAGGCTGGACGCGGCGCTCGGGCGCGTCAACGGACGCCGGCTGCGCGGCATC
ACCATGGGCATCTTCACCGCCTTCCTCGACCTCGTATTCAGGGGCAAGGCGGACGGGCTGCGCAACCTGGACAAG
GACTTTTGCGGCGTGTCCGTGGTGAAGAGCGAGCTCCCGCAAGGCTCGTGA
Transcript >Hirsu2|11018
ATGCTGCTGCTGCCCGTTGTCGTCGTCGCGGCTGTCCTGGCGGCCGTCCAGGCCGTTCGGGTCCCCGGCCCGACG
GGTCCGTATCCGGTCGCGATGCGAGTCCAGCAGCTGACGGACCAGCGGCGCCTCGACCCGTACGCGCCCCCGGGC
AGGCCTCACAAGAGGCGCATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCCGGGCGCTTCGCCGACGGCCCCGTG
CAGAGCGTGCCATACATGCCGCCCCGCACCGCGGCTCTGTACGGCGACGAGGCTGTCAGAGAGTCTCCCCTGCCC
CGGGATTTCTTTTCCCGCCTCACCATCGACTTCTCGCAGTTTCCCAAGAACGGCAGCACGAGCGACGAGGGCCAC
CGGCGGCGATACCCCGTTGTCCTCTTCTCACACGGGCTCGGCGGGTCGAGACTGCTGCACACGGCTGCCGCGCGG
GACATCGCCAGCCAGGGCTATGTGGTGATGACCATCGACCATCCTTACGACGCCTCCTATGTGGAATTCCCCGAC
GGCTCCGAGGTCCGCGGCGCCAACATATCGACGATGCCGGCCATCATTCGGTCGGTCCAGGTTCGCGCGGCAGAC
GTCTCGTTCCTCGTCGATCAGCTGCACGACTCGGCGGCTCTGCAGCGGCTAACGGCCGGGATGGCCGGCGGCGTC
GACGCGGACAAGGTGGTCGTCTGCGGGCACTCGCTGGGGGGCGCGACGAGCGCGGCCGTCATGGCCAACGACAGC
CGCATCGCGGGGGGCCTGGACCTGGACGGGCACATCATCGGGCCGGTCGCCGACGAGGGCTTCGACAGGCCGTTT
GCGCTGGTGGGAAAGCCCGGGCGCGGGCAGACGGCCGGGTCCAAGTGGCCCGAGCTGTACTCTCGCCTGCGGGGG
CCCAAGATGGAGCTGGCCGTGGCCGAGACGGAGCACCTGTCGTTCTTCGACGTGCCGCTGCTGCTGACGACGGCC
AAGGTGGCCGACGGCGACCGGCCCAGGCTGGACGCGGCGCTCGGGCGCGTCAACGGACGCCGGCTGCGCGGCATC
ACCATGGGCATCTTCACCGCCTTCCTCGACCTCGTATTCAGGGGCAAGGCGGACGGGCTGCGCAACCTGGACAAG
GACTTTTGCGGCGTGTCCGTGGTGAAGAGCGAGCTCCCGCAAGGCTCGTGA
Gene >Hirsu2|11018
ATGCTGCTGCTGCCCGTTGTCGTCGTCGCGGCTGTCCTGGCGGCCGTCCAGGCCGTTCGGGTCCCCGGCCCGACG
GGTCCGTATCCGGTCGCGATGCGAGTCCAGCAGCTGACGGACCAGCGGCGCCTCGACCCGTACGCGCCCCCGGGC
AGGCCTCACAAGAGGCGCATCCTCGTCTCCGTCTTTCTGCCGCTCGACCCCGGGCGCTTCGCCGACGGCCCCGTG
CAGAGCGTGCCATACATGCCGCCCCGCACCGCGGCTCTGTACGGCGACGAGGCTGTCAGAGAGTCTCCCCTGCCC
CGGGATTTCTTTTCCCGCCTCACCATCGACTTCTCGCAGTTTCCCAAGAACGGCAGCACGAGCGACGAGGGCCAC
CGGCGGCGATACCCCGTTGTCCTCTTCTCACACGGGCTCGGCGGGTCGAGACTGCTGCACACGGCTGCCGCGCGG
GACATCGCCAGCCAGGGCTATGTGGTGATGACCATCGACCATCCTTACGACGCCTCCTATGTGGAATTCCCCGAC
GGCTCCGAGGTCCGCGGCGCCAACATATCGACGATGCCGGCCATCATTCGGTCGGTCCAGGTCAGTTGGCAGGTC
TCGCCCGGCGTTGATGGGTCTCATCGTTGACGGGGGCATCCTCCTCGGCAGGTTCGCGCGGCAGACGTCTCGTTC
CTCGTCGATCAGCTGCACGACTCGGCGGCTCTGCAGCGGCTAACGGCCGGGATGGCCGGCGGCGTCGACGCGGAC
AAGGTGGTCGTCTGCGGGCACTCGCTGGGGGGCGCGACGAGCGCGGCCGTCATGGCCAACGACAGCCGCATCGCG
GGGGGCCTGGACCTGGACGGGCACATCATCGGGCCGGTCGCCGACGAGGGCTTCGACAGGCCGTTTGCGCTGGTG
GGAAAGCCCGGGCGCGGGCAGACGGCCGGGTCCAAGTGGCCCGAGCTGTACTCTCGCCTGCGGGGGCCCAAGATG
GAGCTGGCCGTGGCCGAGACGGAGCACCTGTCGTTCTTCGACGTGCCGCTGCTGCTGACGACGGCCAAGGTGGCC
GACGGCGACCGGCCCAGGCTGGACGCGGCGCTCGGGCGCGTCAACGGACGCCGGCTGCGCGGCATCACCATGGGC
ATCTTCACCGCCTTCCTCGACCTCGTATTCAGGGGCAAGGCGGACGGGCTGCGCAACCTGGACAAGGACTTTTGC
GGCGTGTCCGTGGTGAAGAGCGAGCTCCCGCAAGGCTCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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