© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|1101 |
| Gene name | |
| Location | Contig_1230:1838..5185 |
| Strand | - |
| Gene length (bp) | 3347 |
| Transcript length (bp) | 2940 |
| Coding sequence length (bp) | 2940 |
| Protein length (aa) | 980 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2916 | 0.8624 | 0.1816 | 0.0837 | 0.1299 | 0.0093 | 0.0481 | 0.0302 | 0.027 | 0.0068 |
| Orthofinder run ID | 4 |
| Orthogroup | 6946 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|2156 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|7567 |
| Ophiocordyceps subramaniannii | Hirsu2|1101 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1101 MDTLKRSSLDDLGLAQAGSRRWSLVSGRIRSPTSSTGSASVSSLDGDGQAACVARDSPTHDCAVHRFLVWVAFRR NHCHFFMTAEQRTQCPMAGCRRPCRDHEDMLQHLAVCVHLASGEYYCHSCGRVEQFADARGRRCLGHASRRRRVI SMAKTFFTSLGGHRAKQPRALAAGLDLPVGPAAGLDLPVDPAAAELDVGQIRQIHEMESNEPGQHYECYLSVPAP TPPTTTTTTTTTSGPSRSAFDESLIIDWSPEATPTPPPPPPYLPILPSPPSPPPPPPPPAVSNAYLGQDLAKTPD RPVLQLNTRVDSGQARQACRSREELTPSLSVRSTPSTTPSSASNISPLSAWSGIWSRPPESTLTSPADDQTNLAD LLPPTSHPRPWRGTESRDIDLSGLADSSLPSELPAELPMLDLLSVNDPGQDDLLPAQPTLALHVPAAPVIPIVPS AEPTPAPTGARHSARLVADASALAQSARKLLEIHVGVSLDRLGYGGDNHLARQLCGLSVESVADAGLETMADMLE GRTPASAVGLLCFVHVAYALSILIHEQGAISRSADLFAQAMSYRSCLSHPDGSAYAQVVGLLWKPSDVAGGHGAD ALRPPPAAAAWSPSQSQPTWREGGRRAPASGEKRPDPLVLVAQHFLDELEASAVRETRQPQVLASGLCDEHRRDS PAHGGALVVALAVDDTMLPLAQRYGPVPGLALAIQQIWDRVKADPAARPRRLELDLLQAGKAHLPWDVYIDEYVQ LVRGRVDALYGPGANPRLRFYRHGIRLLGQLMAQRPEADKSVFATWTTDDITLDSLAADWAGSGLGSLACAELFM PTGVAVPDAAAVAKAPVPGIAVHPPPPEDEAPWLPTAAPVQAAASPGASTSDRPRASTKDGPATTQRMACDSCCG ICGYRPMGNPRWFVGSMAKHKKNKHGSGPPQVYRCPYPGCTSEYKSRRDNLRQHQIDKSHFVEGDEGAGRRPRKR KRTE* |
| Coding | >Hirsu2|1101 ATGGACACCCTCAAGCGTTCGTCGCTCGACGACTTGGGCCTCGCCCAGGCCGGCTCGCGGCGATGGAGCCTGGTC TCCGGCCGGATCCGCTCGCCCACGAGCTCGACCGGCTCTGCCTCGGTTTCTTCGCTCGATGGCGACGGCCAGGCG GCTTGCGTAGCCCGCGATAGCCCGACCCACGACTGCGCCGTCCACCGCTTCCTCGTCTGGGTCGCCTTCAGGCGC AACCACTGCCACTTCTTCATGACGGCCGAGCAGAGGACCCAGTGTCCGATGGCGGGCTGCCGCCGGCCCTGCCGC GACCACGAGGACATGCTGCAACACCTGGCCGTCTGCGTCCACCTCGCCTCGGGCGAGTACTACTGCCACAGCTGC GGCCGCGTCGAGCAGTTCGCCGACGCCAGGGGCCGCCGCTGCCTCGGCCACGCCTCCCGCCGCCGCCGCGTCATC TCCATGGCCAAGACCTTCTTCACCTCCCTCGGCGGCCACAGGGCCAAGCAGCCCCGCGCCCTGGCCGCGGGCCTC GACCTGCCCGTCGGTCCGGCCGCGGGCCTCGACCTGCCCGTCGACCCGGCCGCCGCCGAGCTCGACGTCGGCCAG ATCCGCCAGATTCACGAGATGGAGTCCAACGAGCCCGGACAACACTACGAGTGCTATCTGTCGGTCCCTGCCCCG ACGCCACCGACGACGACGACGACGACGACGACGACGTCCGGCCCTTCCCGGTCCGCCTTTGACGAATCCCTCATC ATCGACTGGAGTCCGGAGGCAACGCCAACACCGCCGCCGCCGCCACCATACCTGCCAATACTACCATCACCGCCA TCGCCGCCACCACCACCACCACCACCCGCCGTGTCCAACGCTTACCTCGGCCAGGACCTAGCCAAGACGCCGGAC AGGCCCGTGCTGCAGCTCAACACCCGCGTCGACAGCGGCCAGGCCCGCCAAGCGTGCCGTAGCAGGGAAGAGCTG ACGCCCAGCCTGTCCGTCCGGTCCACGCCCTCCACAACCCCCAGCTCCGCCAGCAACATCTCCCCCCTGTCTGCC TGGTCCGGCATCTGGAGCAGGCCCCCCGAGTCGACGCTGACCTCTCCGGCGGACGACCAGACCAACCTGGCCGAC CTGCTCCCTCCCACCAGCCATCCGAGGCCGTGGCGGGGGACCGAGAGCCGTGACATAGACCTGTCGGGCCTTGCC GACAGCTCCCTCCCGTCGGAGCTCCCGGCCGAGCTGCCCATGCTTGATCTCCTGTCGGTGAATGACCCGGGCCAA GACGACCTGCTCCCGGCCCAGCCGACCCTGGCCCTCCACGTACCGGCGGCCCCCGTCATCCCCATCGTACCGTCC GCGGAGCCGACGCCGGCCCCGACCGGCGCCCGGCACTCGGCGCGACTGGTGGCCGACGCCTCCGCCCTGGCCCAG TCGGCCCGGAAACTGCTGGAGATACACGTCGGCGTCTCGCTGGACAGGCTCGGCTACGGCGGGGACAACCACCTG GCGCGCCAGCTGTGCGGCCTGTCGGTCGAGTCCGTGGCCGATGCCGGCCTCGAGACCATGGCGGACATGTTGGAG GGCCGCACGCCGGCCTCGGCCGTCGGGCTCCTGTGCTTCGTCCACGTAGCCTACGCGCTGTCCATCCTGATCCAC GAGCAAGGCGCCATCAGCCGCAGTGCGGACCTGTTCGCCCAGGCCATGTCTTACCGTTCCTGCTTGTCTCACCCG GACGGATCGGCCTACGCTCAGGTGGTCGGCCTCCTTTGGAAGCCGAGTGACGTGGCGGGCGGCCATGGTGCCGAC GCGCTGCGGCCGCCGCCGGCCGCCGCGGCCTGGTCGCCGTCGCAGTCGCAGCCGACGTGGCGTGAGGGCGGGCGG CGTGCGCCTGCCTCCGGCGAGAAGCGGCCCGACCCTCTGGTGCTGGTCGCCCAGCACTTCCTCGACGAGCTGGAA GCGTCCGCCGTGCGCGAAACCCGACAGCCCCAAGTGCTGGCCTCGGGGCTCTGCGACGAGCACCGGCGCGACTCG CCCGCCCACGGGGGCGCCCTCGTCGTCGCCCTGGCCGTGGACGACACGATGCTGCCGCTCGCCCAACGGTACGGC CCCGTGCCCGGACTGGCGCTCGCCATACAGCAGATCTGGGACAGGGTCAAGGCGGACCCGGCGGCCAGGCCTCGG CGCCTCGAGCTGGACCTCCTGCAGGCCGGAAAGGCGCATCTTCCCTGGGACGTCTACATTGACGAATACGTGCAG CTGGTGCGCGGGCGGGTGGACGCGCTGTACGGGCCGGGCGCCAACCCGCGGCTGAGGTTCTACCGGCACGGGATC CGCCTGCTGGGGCAGTTGATGGCCCAGCGGCCCGAAGCGGACAAGAGCGTGTTCGCGACGTGGACGACGGACGAC ATCACGCTGGATTCCCTGGCCGCGGACTGGGCCGGCTCCGGGCTCGGTTCACTGGCCTGCGCGGAGCTGTTCATG CCGACGGGTGTCGCCGTCCCCGACGCGGCGGCCGTGGCCAAGGCCCCCGTCCCGGGCATCGCTGTCCATCCACCG CCTCCAGAGGATGAGGCGCCGTGGCTGCCGACGGCCGCCCCGGTGCAGGCGGCGGCGTCGCCCGGTGCCTCGACA AGCGACCGGCCGCGGGCGTCGACAAAGGACGGGCCGGCGACGACGCAGAGGATGGCATGCGACAGCTGCTGTGGG ATATGCGGCTACCGGCCGATGGGCAACCCCCGGTGGTTCGTGGGCAGCATGGCGAAGCACAAAAAGAACAAGCAC GGGTCTGGCCCGCCGCAGGTGTACAGGTGTCCGTATCCCGGATGCACGAGCGAGTACAAGAGCCGGCGGGACAAC CTCCGGCAACACCAGATCGACAAGAGCCACTTCGTCGAGGGCGATGAGGGCGCGGGGCGGCGACCTAGGAAACGG AAGAGGACAGAATGA |
| Transcript | >Hirsu2|1101 ATGGACACCCTCAAGCGTTCGTCGCTCGACGACTTGGGCCTCGCCCAGGCCGGCTCGCGGCGATGGAGCCTGGTC TCCGGCCGGATCCGCTCGCCCACGAGCTCGACCGGCTCTGCCTCGGTTTCTTCGCTCGATGGCGACGGCCAGGCG GCTTGCGTAGCCCGCGATAGCCCGACCCACGACTGCGCCGTCCACCGCTTCCTCGTCTGGGTCGCCTTCAGGCGC AACCACTGCCACTTCTTCATGACGGCCGAGCAGAGGACCCAGTGTCCGATGGCGGGCTGCCGCCGGCCCTGCCGC GACCACGAGGACATGCTGCAACACCTGGCCGTCTGCGTCCACCTCGCCTCGGGCGAGTACTACTGCCACAGCTGC GGCCGCGTCGAGCAGTTCGCCGACGCCAGGGGCCGCCGCTGCCTCGGCCACGCCTCCCGCCGCCGCCGCGTCATC TCCATGGCCAAGACCTTCTTCACCTCCCTCGGCGGCCACAGGGCCAAGCAGCCCCGCGCCCTGGCCGCGGGCCTC GACCTGCCCGTCGGTCCGGCCGCGGGCCTCGACCTGCCCGTCGACCCGGCCGCCGCCGAGCTCGACGTCGGCCAG ATCCGCCAGATTCACGAGATGGAGTCCAACGAGCCCGGACAACACTACGAGTGCTATCTGTCGGTCCCTGCCCCG ACGCCACCGACGACGACGACGACGACGACGACGACGTCCGGCCCTTCCCGGTCCGCCTTTGACGAATCCCTCATC ATCGACTGGAGTCCGGAGGCAACGCCAACACCGCCGCCGCCGCCACCATACCTGCCAATACTACCATCACCGCCA TCGCCGCCACCACCACCACCACCACCCGCCGTGTCCAACGCTTACCTCGGCCAGGACCTAGCCAAGACGCCGGAC AGGCCCGTGCTGCAGCTCAACACCCGCGTCGACAGCGGCCAGGCCCGCCAAGCGTGCCGTAGCAGGGAAGAGCTG ACGCCCAGCCTGTCCGTCCGGTCCACGCCCTCCACAACCCCCAGCTCCGCCAGCAACATCTCCCCCCTGTCTGCC TGGTCCGGCATCTGGAGCAGGCCCCCCGAGTCGACGCTGACCTCTCCGGCGGACGACCAGACCAACCTGGCCGAC CTGCTCCCTCCCACCAGCCATCCGAGGCCGTGGCGGGGGACCGAGAGCCGTGACATAGACCTGTCGGGCCTTGCC GACAGCTCCCTCCCGTCGGAGCTCCCGGCCGAGCTGCCCATGCTTGATCTCCTGTCGGTGAATGACCCGGGCCAA GACGACCTGCTCCCGGCCCAGCCGACCCTGGCCCTCCACGTACCGGCGGCCCCCGTCATCCCCATCGTACCGTCC GCGGAGCCGACGCCGGCCCCGACCGGCGCCCGGCACTCGGCGCGACTGGTGGCCGACGCCTCCGCCCTGGCCCAG TCGGCCCGGAAACTGCTGGAGATACACGTCGGCGTCTCGCTGGACAGGCTCGGCTACGGCGGGGACAACCACCTG GCGCGCCAGCTGTGCGGCCTGTCGGTCGAGTCCGTGGCCGATGCCGGCCTCGAGACCATGGCGGACATGTTGGAG GGCCGCACGCCGGCCTCGGCCGTCGGGCTCCTGTGCTTCGTCCACGTAGCCTACGCGCTGTCCATCCTGATCCAC GAGCAAGGCGCCATCAGCCGCAGTGCGGACCTGTTCGCCCAGGCCATGTCTTACCGTTCCTGCTTGTCTCACCCG GACGGATCGGCCTACGCTCAGGTGGTCGGCCTCCTTTGGAAGCCGAGTGACGTGGCGGGCGGCCATGGTGCCGAC GCGCTGCGGCCGCCGCCGGCCGCCGCGGCCTGGTCGCCGTCGCAGTCGCAGCCGACGTGGCGTGAGGGCGGGCGG CGTGCGCCTGCCTCCGGCGAGAAGCGGCCCGACCCTCTGGTGCTGGTCGCCCAGCACTTCCTCGACGAGCTGGAA GCGTCCGCCGTGCGCGAAACCCGACAGCCCCAAGTGCTGGCCTCGGGGCTCTGCGACGAGCACCGGCGCGACTCG CCCGCCCACGGGGGCGCCCTCGTCGTCGCCCTGGCCGTGGACGACACGATGCTGCCGCTCGCCCAACGGTACGGC CCCGTGCCCGGACTGGCGCTCGCCATACAGCAGATCTGGGACAGGGTCAAGGCGGACCCGGCGGCCAGGCCTCGG CGCCTCGAGCTGGACCTCCTGCAGGCCGGAAAGGCGCATCTTCCCTGGGACGTCTACATTGACGAATACGTGCAG CTGGTGCGCGGGCGGGTGGACGCGCTGTACGGGCCGGGCGCCAACCCGCGGCTGAGGTTCTACCGGCACGGGATC CGCCTGCTGGGGCAGTTGATGGCCCAGCGGCCCGAAGCGGACAAGAGCGTGTTCGCGACGTGGACGACGGACGAC ATCACGCTGGATTCCCTGGCCGCGGACTGGGCCGGCTCCGGGCTCGGTTCACTGGCCTGCGCGGAGCTGTTCATG CCGACGGGTGTCGCCGTCCCCGACGCGGCGGCCGTGGCCAAGGCCCCCGTCCCGGGCATCGCTGTCCATCCACCG CCTCCAGAGGATGAGGCGCCGTGGCTGCCGACGGCCGCCCCGGTGCAGGCGGCGGCGTCGCCCGGTGCCTCGACA AGCGACCGGCCGCGGGCGTCGACAAAGGACGGGCCGGCGACGACGCAGAGGATGGCATGCGACAGCTGCTGTGGG ATATGCGGCTACCGGCCGATGGGCAACCCCCGGTGGTTCGTGGGCAGCATGGCGAAGCACAAAAAGAACAAGCAC GGGTCTGGCCCGCCGCAGGTGTACAGGTGTCCGTATCCCGGATGCACGAGCGAGTACAAGAGCCGGCGGGACAAC CTCCGGCAACACCAGATCGACAAGAGCCACTTCGTCGAGGGCGATGAGGGCGCGGGGCGGCGACCTAGGAAACGG AAGAGGACAGAATGA |
| Gene | >Hirsu2|1101 ATGGACACCCTCAAGCGTTCGTCGCTCGACGACTTGGGCCTCGCCCAGGCCGGCTCGCGGCGATGGAGCCTGGTC TCCGGCCGGATCCGCTCGCCCACGAGCTCGACCGGCTCTGCCTCGGTTTCTTCGCTCGATGGCGACGGCCAGGCG GCTTGCGTGTGAGCATACGGGATGAGAGATGGGGAGGGGCATACACTGAGCGAGGGGTGGGCGGGGGTGAGCGAG AGAGCGAGAGACAGAGGGAGGGGGTGAGGTTGAGGGTGGGAGAGTGAGAAAGAGAGAGAGAGAGAAAGAGAGAGA GCATCGGTGGCCAATGTATTGGGCTGAAAGAGAAGCGGGTGGACAGAGAGAAGGGAGAGGAGCAGAAGAGAGCAC ATGCTGACCTCGCAACGCTACCCCTTTAGAGCCCGCGATAGCCCGACCCACGACTGCGCCGTCCACCGCTTCCTC GTCTGGGTCGCCTTCAGGCGCAACCACTGCCACTTCTTCATGACGGCCGAGCAGAGGACCCAGTGTCCGATGGCG GGCTGCCGCCGGCCCTGCCGCGACCACGAGGACATGCTGCAACACCTGGCCGTCTGCGTCCACCTCGCCTCGGGC GAGTACTACTGCCACAGCTGCGGCCGCGTCGAGCAGTTCGCCGACGCCAGGGGCCGCCGCTGCCTCGGCCACGCC TCCCGCCGCCGCCGCGTCATCTCCATGGCCAAGACCTTCTTCACCTCCCTCGGCGGCCACAGGGCCAAGCAGCCC CGCGCCCTGGCCGCGGGCCTCGACCTGCCCGTCGGTCCGGCCGCGGGCCTCGACCTGCCCGTCGACCCGGCCGCC GCCGAGCTCGACGTCGGCCAGATCCGCCAGATTCACGAGATGGAGTCCAACGAGCCCGGACAACACTACGAGTGC TATCTGTCGGTCCCTGCCCCGACGCCACCGACGACGACGACGACGACGACGACGACGTCCGGCCCTTCCCGGTCC GCCTTTGACGAATCCCTCATCATCGACTGGAGTCCGGAGGCAACGCCAACACCGCCGCCGCCGCCACCATACCTG CCAATACTACCATCACCGCCATCGCCGCCACCACCACCACCACCACCCGCCGTGTCCAACGCTTACCTCGGCCAG GACCTAGCCAAGACGCCGGACAGGCCCGTGCTGCAGCTCAACACCCGCGTCGACAGCGGCCAGGCCCGCCAAGCG TGCCGTAGCAGGGAAGAGCTGACGCCCAGCCTGTCCGTCCGGTCCACGCCCTCCACAACCCCCAGCTCCGCCAGC AACATCTCCCCCCTGTCTGCCTGGTCCGGCATCTGGAGCAGGCCCCCCGAGTCGACGCTGACCTCTCCGGCGGAC GACCAGACCAACCTGGCCGACCTGCTCCCTCCCACCAGCCATCCGAGGCCGTGGCGGGGGACCGAGAGCCGTGAC ATAGACCTGTCGGGCCTTGCCGACAGCTCCCTCCCGTCGGAGCTCCCGGCCGAGCTGCCCATGCTTGATCTCCTG TCGGTGAATGACCCGGGCCAAGACGACCTGCTCCCGGCCCAGCCGACCCTGGCCCTCCACGTACCGGCGGCCCCC GTCATCCCCATCGTACCGTCCGCGGAGCCGACGCCGGCCCCGACCGGCGCCCGGCACTCGGCGCGACTGGTGGCC GACGCCTCCGCCCTGGCCCAGTCGGCCCGGAAACTGCTGGAGATACACGTCGGCGTCTCGCTGGACAGGCTCGGC TACGGCGGGGACAACCACCTGGCGCGCCAGCTGTGCGGCCTGTCGGTCGAGTCCGTGGCCGATGCCGGCCTCGAG ACCATGGCGGACATGTTGGAGGGCCGCACGCCGGCCTCGGCCGTCGGGCTCCTGTGCTTCGTCCACGTAGCCTAC GCGCTGTCCATCCTGATCCACGAGCAAGGCGCCATCAGCCGCAGTGCGGACCTGTTCGCCCAGGCCATGTCTTAC CGTTCCTGCTTGTCTCACCCGGACGGATCGGCCTACGCTCAGGTGGTCGGCCTCCTTTGGAAGCCGAGTGACGTG GCGGGCGGCCATGGTGCCGACGCGCTGCGGCCGCCGCCGGCCGCCGCGGCCTGGTCGCCGTCGCAGTCGCAGCCG ACGTGGCGTGAGGGCGGGCGGCGTGCGCCTGCCTCCGGCGAGAAGCGGCCCGACCCTCTGGTGCTGGTCGCCCAG CACTTCCTCGACGGTAAGGACCATGAAAAGACGGCTGACGAAACCGACCGTCGTCGTAGTCGTCGTCTGGTGGCT GACGCGCGCCGTGGCACAGAGCTGGAAGCGTCCGCCGTGCGCGAAACCCGACAGCCCCAAGTGCTGGCCTCGGGG CTCTGCGACGAGCACCGGCGCGACTCGCCCGCCCACGGGGGCGCCCTCGTCGTCGCCCTGGCCGTGGACGACACG ATGCTGCCGCTCGCCCAACGGTACGGCCCCGTGCCCGGACTGGCGCTCGCCATACAGCAGATCTGGGACAGGGTC AAGGCGGACCCGGCGGCCAGGCCTCGGCGCCTCGAGCTGGACCTCCTGCAGGCCGGAAAGGTGGGTGCCCCATTG GCCTTGCCGGACCGCAACGAGCGGAGCGACCTGCCGCTACTGCGGATGGCTAACGAGCGACACAGGCGCATCTTC CCTGGGACGTCTACATTGACGAATACGTGCAGCTGGTGCGCGGGCGGGTGGACGCGCTGTACGGGCCGGGCGCCA ACCCGCGGCTGAGGTTCTACCGGCACGGGATCCGCCTGCTGGGGCAGTTGATGGCCCAGCGGCCCGAAGCGGACA AGAGCGTGTTCGCGACGTGGACGACGGACGACATCACGCTGGATTCCCTGGCCGCGGACTGGGCCGGCTCCGGGC TCGGTTCACTGGCCTGCGCGGAGCTGTTCATGCCGACGGGTGTCGCCGTCCCCGACGCGGCGGCCGTGGCCAAGG CCCCCGTCCCGGGCATCGCTGTCCATCCACCGCCTCCAGAGGATGAGGCGCCGTGGCTGCCGACGGCCGCCCCGG TGCAGGCGGCGGCGTCGCCCGGTGCCTCGACAAGCGACCGGCCGCGGGCGTCGACAAAGGACGGGCCGGCGACGA CGCAGAGGATGGCATGCGACAGCTGCTGTGGGATATGCGGCTACCGGCCGATGGGCAACCCCCGGTGGTTCGTGG GCAGCATGGCGAAGCACAAAAAGAACAAGCACGGGTCTGGCCCGCCGCAGGTGTACAGGTGTCCGTATCCCGGAT GCACGAGCGAGTACAAGAGCCGGCGGGACAACCTCCGGCAACACCAGATCGACAAGAGCCACTTCGTCGAGGGCG ATGAGGGCGCGGGGCGGCGACCTAGGAAACGGAAGAGGACAGAATGA |