Protein ID | Hirsu2|11006 |
Gene name | |
Location | Contig_944:4730..5333 |
Strand | - |
Gene length (bp) | 603 |
Transcript length (bp) | 603 |
Coding sequence length (bp) | 603 |
Protein length (aa) | 201 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1603 | 0.0816 | 0.8951 | 0.1631 | 0.07 | 0.0457 | 0.2629 | 0.1972 | 0.236 | 0.0035 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.963747 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 24 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 7482 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|11006 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|11006 MRPLSNVIWIWALATMTLLSIAAEREKRDWIARRQQPDFQDESLGAGTSAFDCQKLEEQRNKTMELFRRPLTREE YESRNFMWVRCRMKYGKAFDLGGLWFGPNGKWLREAVEPRILVEWHFRYYRGDWGDADLSFNTHLELNLVQTLEA FMRVASVRNQVNHRNLYLLNCPKMEHHEYYGWEAGKTYRAIYNVQLKSPW* |
Coding | >Hirsu2|11006 ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG TAA |
Transcript | >Hirsu2|11006 ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG TAA |
Gene | >Hirsu2|11006 ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG TAA |