Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11006
Gene name
LocationContig_944:4730..5333
Strand-
Gene length (bp)603
Transcript length (bp)603
Coding sequence length (bp)603
Protein length (aa) 201

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1603 0.0816 0.8951 0.1631 0.07 0.0457 0.2629 0.1972 0.236 0.0035

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.963747

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7482
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|11006 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11006
MRPLSNVIWIWALATMTLLSIAAEREKRDWIARRQQPDFQDESLGAGTSAFDCQKLEEQRNKTMELFRRPLTREE
YESRNFMWVRCRMKYGKAFDLGGLWFGPNGKWLREAVEPRILVEWHFRYYRGDWGDADLSFNTHLELNLVQTLEA
FMRVASVRNQVNHRNLYLLNCPKMEHHEYYGWEAGKTYRAIYNVQLKSPW*
Coding >Hirsu2|11006
ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC
GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC
TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG
TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG
TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT
CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG
TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG
CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG
TAA
Transcript >Hirsu2|11006
ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC
GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC
TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG
TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG
TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT
CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG
TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG
CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG
TAA
Gene >Hirsu2|11006
ATGAGGCCCTTGAGCAACGTGATCTGGATATGGGCGCTGGCGACTATGACCTTGCTATCGATTGCAGCCGAACGC
GAGAAGCGAGACTGGATAGCGCGACGTCAACAGCCTGATTTCCAGGACGAGAGTCTGGGCGCGGGCACCTCCGCC
TTCGACTGCCAGAAGCTCGAGGAACAGCGCAACAAGACAATGGAACTGTTCCGACGCCCTCTCACCAGGGAAGAG
TACGAGTCGCGTAACTTCATGTGGGTGCGATGCCGCATGAAGTACGGCAAGGCGTTCGACTTAGGAGGCCTGTGG
TTTGGTCCCAACGGGAAATGGCTGAGGGAAGCCGTGGAGCCTCGAATACTGGTTGAGTGGCACTTCAGATACTAT
CGTGGCGATTGGGGTGATGCGGACCTCTCCTTCAACACGCATTTGGAGTTGAACTTGGTCCAAACGTTGGAAGCG
TTCATGCGAGTTGCAAGCGTCCGCAACCAGGTCAACCACCGCAATCTTTACCTCCTCAACTGCCCGAAAATGGAG
CACCATGAGTATTACGGCTGGGAAGCCGGTAAAACTTATCGCGCCATATACAACGTGCAACTCAAGAGCCCCTGG
TAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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