Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1100
Gene name
LocationContig_123:33696..34788
Strand+
Gene length (bp)1092
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5066 0.5342 0.4709 0.0982 0.2721 0.132 0.175 0.124 0.1824 0.1087

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8642
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1100 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1100
MLSSSEEKATCPGRGKLRSMRCDAPFCRLLVSDRPSRSPQARLGRGLACSSSGSMTTKAMGAAAAEPDAPMPPRR
PIMARRQHSNRLRFASLPPGPFLVALSGGREARQVFSAILHPAACCLSDMPCRSSRVRRLRPGPPSTQLSLDERA
LGRISAARTTGSPGPLFPASDARWPPLLVEESRSRMDSLASPSPCNAPTARGLPFRGGGSAVAGSAFSIALVPRL
LALWPRQPGLVHAAARTSRRLYSLLGLRLWCQRLRNAGQEPPSPHATPNSHRLPRPITGGGSAAAANAMTTPLSW
NPGTVRLSTSHDRILRPHPTRHAAAGRMGLGAACRVRPLRGSRVSGRRRQMASRLSWRWQHPR*
Coding >Hirsu2|1100
ATGCTCTCGTCCTCAGAGGAGAAGGCGACCTGCCCCGGCCGTGGAAAGTTGCGCTCCATGCGTTGCGACGCACCC
TTCTGCCGCCTGCTCGTCTCGGACCGACCGAGTCGCAGCCCCCAAGCCAGGCTCGGACGAGGATTGGCCTGCAGC
AGCTCCGGCTCGATGACGACCAAGGCGATGGGCGCCGCCGCCGCCGAGCCCGACGCTCCTATGCCGCCGCGTCGC
CCAATCATGGCCAGACGACAGCACAGCAACCGCCTCCGATTCGCCTCTCTGCCTCCGGGACCGTTCCTCGTCGCC
CTATCAGGGGGGAGGGAGGCACGGCAGGTTTTCTCGGCGATTCTTCATCCAGCCGCTTGCTGTCTGTCCGACATG
CCCTGCAGAAGCTCACGAGTTCGGCGGCTACGGCCTGGACCCCCGTCTACGCAGCTATCTCTGGATGAGAGAGCG
CTGGGCAGGATCTCTGCGGCCCGTACAACTGGTTCCCCTGGCCCCCTTTTCCCGGCGTCGGACGCGCGATGGCCG
CCTTTGCTCGTGGAGGAGTCACGGAGTCGGATGGACTCGTTGGCCTCCCCGTCGCCATGTAACGCTCCGACAGCC
AGAGGCCTTCCGTTCCGGGGAGGTGGCTCTGCCGTTGCTGGATCGGCTTTCTCTATCGCTCTGGTCCCGCGACTG
CTCGCCCTCTGGCCGCGCCAGCCGGGCCTCGTCCATGCTGCGGCCCGAACGTCACGACGACTCTACAGCCTGCTG
GGCCTCCGTCTCTGGTGCCAGCGTCTCCGCAACGCTGGACAAGAGCCCCCCTCCCCCCATGCAACCCCGAACAGC
CATCGGCTCCCACGACCAATCACGGGCGGAGGCTCCGCGGCCGCGGCCAATGCTATGACGACGCCATTGTCGTGG
AATCCTGGCACGGTCCGCCTCTCGACGTCGCACGACCGAATCCTCCGGCCGCACCCGACTCGCCACGCGGCGGCG
GGCAGGATGGGCCTGGGAGCTGCGTGCCGCGTGCGTCCTCTGCGCGGTTCCCGGGTATCCGGTCGTCGACGCCAA
ATGGCAAGCCGACTGTCGTGGCGGTGGCAGCATCCCAGATGA
Transcript >Hirsu2|1100
ATGCTCTCGTCCTCAGAGGAGAAGGCGACCTGCCCCGGCCGTGGAAAGTTGCGCTCCATGCGTTGCGACGCACCC
TTCTGCCGCCTGCTCGTCTCGGACCGACCGAGTCGCAGCCCCCAAGCCAGGCTCGGACGAGGATTGGCCTGCAGC
AGCTCCGGCTCGATGACGACCAAGGCGATGGGCGCCGCCGCCGCCGAGCCCGACGCTCCTATGCCGCCGCGTCGC
CCAATCATGGCCAGACGACAGCACAGCAACCGCCTCCGATTCGCCTCTCTGCCTCCGGGACCGTTCCTCGTCGCC
CTATCAGGGGGGAGGGAGGCACGGCAGGTTTTCTCGGCGATTCTTCATCCAGCCGCTTGCTGTCTGTCCGACATG
CCCTGCAGAAGCTCACGAGTTCGGCGGCTACGGCCTGGACCCCCGTCTACGCAGCTATCTCTGGATGAGAGAGCG
CTGGGCAGGATCTCTGCGGCCCGTACAACTGGTTCCCCTGGCCCCCTTTTCCCGGCGTCGGACGCGCGATGGCCG
CCTTTGCTCGTGGAGGAGTCACGGAGTCGGATGGACTCGTTGGCCTCCCCGTCGCCATGTAACGCTCCGACAGCC
AGAGGCCTTCCGTTCCGGGGAGGTGGCTCTGCCGTTGCTGGATCGGCTTTCTCTATCGCTCTGGTCCCGCGACTG
CTCGCCCTCTGGCCGCGCCAGCCGGGCCTCGTCCATGCTGCGGCCCGAACGTCACGACGACTCTACAGCCTGCTG
GGCCTCCGTCTCTGGTGCCAGCGTCTCCGCAACGCTGGACAAGAGCCCCCCTCCCCCCATGCAACCCCGAACAGC
CATCGGCTCCCACGACCAATCACGGGCGGAGGCTCCGCGGCCGCGGCCAATGCTATGACGACGCCATTGTCGTGG
AATCCTGGCACGGTCCGCCTCTCGACGTCGCACGACCGAATCCTCCGGCCGCACCCGACTCGCCACGCGGCGGCG
GGCAGGATGGGCCTGGGAGCTGCGTGCCGCGTGCGTCCTCTGCGCGGTTCCCGGGTATCCGGTCGTCGACGCCAA
ATGGCAAGCCGACTGTCGTGGCGGTGGCAGCATCCCAGATGA
Gene >Hirsu2|1100
ATGCTCTCGTCCTCAGAGGAGAAGGCGACCTGCCCCGGCCGTGGAAAGTTGCGCTCCATGCGTTGCGACGCACCC
TTCTGCCGCCTGCTCGTCTCGGACCGACCGAGTCGCAGCCCCCAAGCCAGGCTCGGACGAGGATTGGCCTGCAGC
AGCTCCGGCTCGATGACGACCAAGGCGATGGGCGCCGCCGCCGCCGAGCCCGACGCTCCTATGCCGCCGCGTCGC
CCAATCATGGCCAGACGACAGCACAGCAACCGCCTCCGATTCGCCTCTCTGCCTCCGGGACCGTTCCTCGTCGCC
CTATCAGGGGGGAGGGAGGCACGGCAGGTTTTCTCGGCGATTCTTCATCCAGCCGCTTGCTGTCTGTCCGACATG
CCCTGCAGAAGCTCACGAGTTCGGCGGCTACGGCCTGGACCCCCGTCTACGCAGCTATCTCTGGATGAGAGAGCG
CTGGGCAGGATCTCTGCGGCCCGTACAACTGGTTCCCCTGGCCCCCTTTTCCCGGCGTCGGACGCGCGATGGCCG
CCTTTGCTCGTGGAGGAGTCACGGAGTCGGATGGACTCGTTGGCCTCCCCGTCGCCATGTAACGCTCCGACAGCC
AGAGGCCTTCCGTTCCGGGGAGGTGGCTCTGCCGTTGCTGGATCGGCTTTCTCTATCGCTCTGGTCCCGCGACTG
CTCGCCCTCTGGCCGCGCCAGCCGGGCCTCGTCCATGCTGCGGCCCGAACGTCACGACGACTCTACAGCCTGCTG
GGCCTCCGTCTCTGGTGCCAGCGTCTCCGCAACGCTGGACAAGAGCCCCCCTCCCCCCATGCAACCCCGAACAGC
CATCGGCTCCCACGACCAATCACGGGCGGAGGCTCCGCGGCCGCGGCCAATGCTATGACGACGCCATTGTCGTGG
AATCCTGGCACGGTCCGCCTCTCGACGTCGCACGACCGAATCCTCCGGCCGCACCCGACTCGCCACGCGGCGGCG
GGCAGGATGGGCCTGGGAGCTGCGTGCCGCGTGCGTCCTCTGCGCGGTTCCCGGGTATCCGGTCGTCGACGCCAA
ATGGCAAGCCGACTGTCGTGGCGGTGGCAGCATCCCAGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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