Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|110
Gene name
LocationContig_1015:7418..8219
Strand+
Gene length (bp)801
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.2263 0.1554 0.2078 0.6062 0.2648 0.0302 0.1075 0.5153 0.1725 0.0457

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6508
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|309
Ophiocordyceps australis map64 (Brazil) OphauB2|5461
Ophiocordyceps kimflemingae Ophio5|8558
Ophiocordyceps subramaniannii Hirsu2|110 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|110
MADPSCTVTIVLATTIPSAVLLLLGAVLFWRLFRRKKRLFHRGITPIDDEEIASWKTARSDEKVAGPGPPSSIWR
DSLPSSHRPSNSVVSSRKPASVIVYQNPSQHGLRLSEDMPTSPPHNKRSVDVPPTPVLARAPNARPGLTDEAIQG
EDAFIAQARRHPCRLAKPPPPRVPRHNRSKSSRATMSGATGTRDLWYGQHFDYQRLPRRSADQILPMSAAFGADF
SDVPSTRSTPVRATFDDDVAFPGGLSPRPLVRKSEIGRAIG*
Coding >Hirsu2|110
ATGGCGGACCCGAGCTGTACCGTCACCATCGTCCTGGCGACGACGATCCCGTCCGCCGTGCTCCTCCTCCTGGGC
GCCGTGCTGTTCTGGCGCCTGTTCCGGCGCAAGAAGCGCCTCTTCCACCGCGGCATCACGCCCATCGACGACGAG
GAGATTGCGTCGTGGAAGACGGCCCGGTCCGACGAAAAGGTGGCCGGTCCCGGGCCGCCGTCGAGCATATGGCGT
GACAGCCTGCCCTCGAGCCACCGGCCCTCCAACTCGGTCGTCTCGTCGCGCAAGCCGGCCAGCGTCATCGTCTAC
CAGAACCCGTCCCAGCACGGCCTGCGCCTGTCCGAGGACATGCCCACCTCTCCGCCCCACAACAAGCGAAGCGTC
GACGTGCCGCCCACGCCCGTCCTGGCCCGGGCCCCGAACGCGCGGCCCGGCCTGACGGACGAGGCCATCCAGGGC
GAGGACGCCTTCATCGCCCAGGCCAGGCGCCACCCGTGCCGCCTGGCCAAGCCGCCGCCGCCGCGGGTGCCGCGC
CACAACCGCAGCAAGAGCTCGCGGGCCACCATGTCCGGCGCGACCGGCACGCGCGACCTGTGGTACGGCCAGCAC
TTTGACTACCAGAGGCTGCCTCGCCGGTCCGCCGACCAGATCCTCCCCATGTCGGCCGCCTTCGGGGCCGATTTC
AGCGACGTGCCCTCGACGCGATCCACGCCCGTCCGAGCCACCTTTGACGACGACGTCGCCTTCCCCGGCGGCCTC
TCCCCACGACCTCTGGTCCGCAAGTCGGAGATCGGGCGGGCCATAGGCTGA
Transcript >Hirsu2|110
ATGGCGGACCCGAGCTGTACCGTCACCATCGTCCTGGCGACGACGATCCCGTCCGCCGTGCTCCTCCTCCTGGGC
GCCGTGCTGTTCTGGCGCCTGTTCCGGCGCAAGAAGCGCCTCTTCCACCGCGGCATCACGCCCATCGACGACGAG
GAGATTGCGTCGTGGAAGACGGCCCGGTCCGACGAAAAGGTGGCCGGTCCCGGGCCGCCGTCGAGCATATGGCGT
GACAGCCTGCCCTCGAGCCACCGGCCCTCCAACTCGGTCGTCTCGTCGCGCAAGCCGGCCAGCGTCATCGTCTAC
CAGAACCCGTCCCAGCACGGCCTGCGCCTGTCCGAGGACATGCCCACCTCTCCGCCCCACAACAAGCGAAGCGTC
GACGTGCCGCCCACGCCCGTCCTGGCCCGGGCCCCGAACGCGCGGCCCGGCCTGACGGACGAGGCCATCCAGGGC
GAGGACGCCTTCATCGCCCAGGCCAGGCGCCACCCGTGCCGCCTGGCCAAGCCGCCGCCGCCGCGGGTGCCGCGC
CACAACCGCAGCAAGAGCTCGCGGGCCACCATGTCCGGCGCGACCGGCACGCGCGACCTGTGGTACGGCCAGCAC
TTTGACTACCAGAGGCTGCCTCGCCGGTCCGCCGACCAGATCCTCCCCATGTCGGCCGCCTTCGGGGCCGATTTC
AGCGACGTGCCCTCGACGCGATCCACGCCCGTCCGAGCCACCTTTGACGACGACGTCGCCTTCCCCGGCGGCCTC
TCCCCACGACCTCTGGTCCGCAAGTCGGAGATCGGGCGGGCCATAGGCTGA
Gene >Hirsu2|110
ATGGCGGACCCGAGCTGTACCGTCACCATCGTCCTGGCGACGACGATCCCGTCCGCCGTGCTCCTCCTCCTGGGC
GCCGTGCTGTTCTGGCGCCTGTTCCGGCGCAAGAAGCGCCTCTTCCACCGCGGCATCACGCCCATCGACGACGAG
GAGATTGCGTCGTGGAAGACGGCCCGGTCCGACGAAAAGGTGGCCGGTCCCGGGCCGCCGTCGAGCATATGGCGT
GACAGCCTGCCCTCGAGCCACCGGCCCTCCAACTCGGTCGTCTCGTCGCGCAAGCCGGCCAGCGTCATCGTCTAC
CAGAACCCGTCCCAGCACGGCCTGCGCCTGTCCGAGGACATGCCCACCTCTCCGCCCCACAACAAGCGAAGCGTC
GACGTGCCGCCCACGCCCGTCCTGGCCCGGGCCCCGAACGCGCGGCCCGGCCTGACGGACGAGGCCATCCAGGGC
GAGGACGCCTTCATCGCCCAGGCCAGGCGCCACCCGTGCCGCCTGGCCAAGCCGCCGCCGCCGCGGGTGCCGCGC
CACAACCGCAGCAAGAGCTCGCGGGCCACCATGTCCGGCGCGACCGGCACGCGCGACCTGTGGTACGGCCAGCAC
TTTGACTACCAGAGGCTGCCTCGCCGGTCCGCCGACCAGATCCTCCCCATGTCGGCCGCCTTCGGGGCCGATTTC
AGCGACGTGCCCTCGACGCGATCCACGCCCGTCCGAGCCACCTTTGACGACGACGTCGCCTTCCCCGGCGGCCTC
TCCCCACGACCTCTGGTCCGCAAGTCGGAGATCGGGCGGGCCATAGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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