Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|11
Gene name
LocationContig_10:22856..24378
Strand+
Gene length (bp)1522
Transcript length (bp)1179
Coding sequence length (bp)1179
Protein length (aa) 393

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01207 Dus Dihydrouridine synthase (Dus) 1.5E-29 38 254

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O95620|DUS4L_HUMAN tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS4L PE=2 SV=2 21 376 4.0E-54
sp|O74553|DUS4_SCHPO tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus4 PE=3 SV=1 21 363 3.0E-53
sp|Q32M08|DUS4L_MOUSE tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1 21 376 9.0E-53
sp|Q06063|DUS4_YEAST tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS4 PE=1 SV=1 14 386 7.0E-50
sp|Q09504|YQI2_CAEEL Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 OS=Caenorhabditis elegans GN=C45G9.2 PE=3 SV=2 41 370 1.0E-40
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Swissprot ID Swissprot Description Start End E-value
sp|O95620|DUS4L_HUMAN tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS4L PE=2 SV=2 21 376 4.0E-54
sp|O74553|DUS4_SCHPO tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus4 PE=3 SV=1 21 363 3.0E-53
sp|Q32M08|DUS4L_MOUSE tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1 21 376 9.0E-53
sp|Q06063|DUS4_YEAST tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS4 PE=1 SV=1 14 386 7.0E-50
sp|Q09504|YQI2_CAEEL Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 OS=Caenorhabditis elegans GN=C45G9.2 PE=3 SV=2 41 370 1.0E-40
sp|Q6P1R4|DUS1L_HUMAN tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS1L PE=1 SV=1 36 389 3.0E-25
sp|Q8C2P3|DUS1L_MOUSE tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus GN=Dus1l PE=2 SV=1 36 340 4.0E-24
sp|Q8K582|DUS1L_RAT tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1 36 340 1.0E-23
sp|Q9HGN6|DUS1_SCHPO tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus1 PE=3 SV=1 16 199 2.0E-16
sp|P53759|DUS1_YEAST tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS1 PE=1 SV=1 23 218 8.0E-16
sp|O74731|DUS2_SCHPO tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus2 PE=3 SV=1 39 253 2.0E-11
sp|O67533|DUS_AQUAE Probable tRNA-dihydrouridine synthase OS=Aquifex aeolicus (strain VF5) GN=dus PE=3 SV=1 39 305 2.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus|Mitochondrion Mitochondrial transit peptide 0.6585 0.5458 0.1001 0.0407 0.7112 0.0167 0.0861 0.183 0.0977 0.021

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1452
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2868
Ophiocordyceps australis map64 (Brazil) OphauB2|2255
Ophiocordyceps camponoti-floridani Ophcf2|05114
Ophiocordyceps camponoti-rufipedis Ophun1|7510
Ophiocordyceps kimflemingae Ophio5|4373
Ophiocordyceps subramaniannii Hirsu2|11 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|11
MQASAGDGDEDGLLPSASSHPLKLFDAAKRQDRFLYACAPMVRYSKLAFRQTVHKYGVDLSWTPMILAKEFNRSS
VARDSDLTVSTRGAQPPTILQFGANSPLELSRAAALAAPFVAGVDLNCGCPQSWACAETLGAALMDQRQLVRDMV
VETRQRLSHDGWAVGLDADMDSSLGRSVSVKIRVHGDLRRTMDFLDTVIGHPQNRQVDWITIHPRTRHTPSSVPI
RTEALEILTSQYAATLPILLSGDVFALSALPFQSPRDLVTFSSSAGTTDGDGGGTSLRPSTTRLAGFMSARGLLA
NPALFAGHAACPWEALETFMCNVARCPLPFKLVAHHVAQMCGPGMGADKSALLPKKERAKLTDLTNMLDLVDFLD
DKMEQQTGRKGGLRRDL*
Coding >Hirsu2|11
ATGCAGGCCTCGGCCGGGGACGGTGACGAGGATGGACTCCTCCCGTCCGCCTCCTCACACCCGCTCAAGCTGTTC
GACGCAGCCAAGAGGCAGGACAGGTTTCTATACGCCTGTGCGCCCATGGTACGCTACAGCAAGCTCGCCTTCCGA
CAGACGGTCCACAAGTACGGCGTCGACCTGAGCTGGACGCCCATGATCCTCGCCAAGGAGTTCAACCGCAGCAGC
GTCGCCAGAGACAGCGACCTGACCGTCTCGACCCGCGGCGCCCAGCCGCCGACCATTCTCCAATTTGGCGCAAAC
TCGCCGCTGGAGCTCTCCCGCGCCGCAGCCCTGGCCGCGCCCTTTGTCGCCGGCGTCGACCTCAACTGCGGCTGC
CCCCAGTCCTGGGCCTGCGCCGAGACGCTCGGCGCCGCCCTCATGGACCAGCGCCAGCTCGTCCGCGACATGGTC
GTCGAGACGCGCCAGCGCCTCAGCCACGACGGCTGGGCCGTCGGCCTGGACGCCGACATGGACAGCTCGCTGGGG
CGGAGCGTGAGCGTCAAGATACGCGTGCACGGTGACCTGCGGCGGACGATGGATTTCCTCGACACAGTCATAGGA
CACCCGCAGAACCGCCAGGTCGACTGGATCACCATCCATCCGCGCACAAGGCACACGCCCTCGAGCGTGCCCATC
CGCACCGAGGCCCTTGAGATCCTCACCTCCCAGTACGCCGCCACGCTCCCTATCCTGCTCTCCGGCGACGTCTTC
GCCCTGTCCGCCCTCCCCTTCCAGTCCCCGCGCGACCTCGTGACCTTCTCCTCTTCAGCCGGCACAACGGACGGC
GACGGCGGCGGCACTTCGCTCCGGCCCAGCACCACCCGCCTGGCGGGCTTCATGTCCGCGCGCGGCCTCCTCGCC
AACCCGGCCCTCTTCGCCGGCCACGCGGCCTGCCCCTGGGAAGCCCTCGAGACCTTCATGTGCAACGTCGCGCGC
TGCCCGCTGCCCTTCAAGCTCGTCGCCCACCACGTCGCGCAGATGTGCGGGCCCGGCATGGGGGCCGACAAGTCG
GCTCTGCTGCCCAAGAAGGAGAGGGCCAAGCTCACGGACCTGACCAACATGCTCGACCTCGTCGACTTCTTGGAC
GACAAGATGGAGCAGCAGACGGGGAGAAAGGGGGGCCTGCGGCGAGACTTGTGA
Transcript >Hirsu2|11
ATGCAGGCCTCGGCCGGGGACGGTGACGAGGATGGACTCCTCCCGTCCGCCTCCTCACACCCGCTCAAGCTGTTC
GACGCAGCCAAGAGGCAGGACAGGTTTCTATACGCCTGTGCGCCCATGGTACGCTACAGCAAGCTCGCCTTCCGA
CAGACGGTCCACAAGTACGGCGTCGACCTGAGCTGGACGCCCATGATCCTCGCCAAGGAGTTCAACCGCAGCAGC
GTCGCCAGAGACAGCGACCTGACCGTCTCGACCCGCGGCGCCCAGCCGCCGACCATTCTCCAATTTGGCGCAAAC
TCGCCGCTGGAGCTCTCCCGCGCCGCAGCCCTGGCCGCGCCCTTTGTCGCCGGCGTCGACCTCAACTGCGGCTGC
CCCCAGTCCTGGGCCTGCGCCGAGACGCTCGGCGCCGCCCTCATGGACCAGCGCCAGCTCGTCCGCGACATGGTC
GTCGAGACGCGCCAGCGCCTCAGCCACGACGGCTGGGCCGTCGGCCTGGACGCCGACATGGACAGCTCGCTGGGG
CGGAGCGTGAGCGTCAAGATACGCGTGCACGGTGACCTGCGGCGGACGATGGATTTCCTCGACACAGTCATAGGA
CACCCGCAGAACCGCCAGGTCGACTGGATCACCATCCATCCGCGCACAAGGCACACGCCCTCGAGCGTGCCCATC
CGCACCGAGGCCCTTGAGATCCTCACCTCCCAGTACGCCGCCACGCTCCCTATCCTGCTCTCCGGCGACGTCTTC
GCCCTGTCCGCCCTCCCCTTCCAGTCCCCGCGCGACCTCGTGACCTTCTCCTCTTCAGCCGGCACAACGGACGGC
GACGGCGGCGGCACTTCGCTCCGGCCCAGCACCACCCGCCTGGCGGGCTTCATGTCCGCGCGCGGCCTCCTCGCC
AACCCGGCCCTCTTCGCCGGCCACGCGGCCTGCCCCTGGGAAGCCCTCGAGACCTTCATGTGCAACGTCGCGCGC
TGCCCGCTGCCCTTCAAGCTCGTCGCCCACCACGTCGCGCAGATGTGCGGGCCCGGCATGGGGGCCGACAAGTCG
GCTCTGCTGCCCAAGAAGGAGAGGGCCAAGCTCACGGACCTGACCAACATGCTCGACCTCGTCGACTTCTTGGAC
GACAAGATGGAGCAGCAGACGGGGAGAAAGGGGGGCCTGCGGCGAGACTTGTGA
Gene >Hirsu2|11
ATGCAGGCCTCGGCCGGGGACGGTGACGAGGATGGACTCCTCCCGTCCGCCTCCTCACAGTGAGTCGTGCCTCTC
ACCACCCCCTCATGCCCTCGACCAAGAGACACAGAAGCTGACCGTTCCGCCGCGCAGCCCGCTCAAGCTGTTCGA
CGCAGCCAAGAGGCAGGACAGGTTTCTATACGCCTGTGCGCCCATGGTACGCTACAGCAAGGCATGCCGCCCCCC
TTCCCTTCTCTTCTGTCCTCTGTCTTCAAGGCGGCCTCGTCGTCGGCGCCCGTCGCTCACCTCGACGCGCCGTCT
GCAGCTCGCCTTCCGACAGACGGTCCACAAGTACGGCGTCGACCTGAGCTGGACGCCCATGATCCTCGCCAAGGA
GTTCAACCGCAGCAGCGTCGCCAGAGACAGCGGTGCGAAAAGCTCCCTCCGTCTATCGCAGCAACCCCCTTCGCT
GACCGGGAACAAAAAAACAACAAAAAAAAAAGGGACAGACCTGACCGTCTCGACCCGCGGCGCCCAGCCGCCGAC
CATTCTCCAATTTGGCGCAAACTCGCCGCTGGAGCTCTCCCGCGCCGCAGCCCTGGCCGCGCCCTTTGTCGCCGG
CGTCGACCTCAACTGCGGCTGCCCCCAGTCCTGGGCCTGCGCCGAGACGCTCGGCGCCGCCCTCATGGACCAGCG
CCAGCTCGTCCGCGACATGGTCGTCGAGACGCGCCAGCGCCTCAGCCACGACGGCTGGGCCGTCGGCCTGGACGC
CGACATGGACAGCTCGCTGGGGCGGAGCGTGAGCGTCAAGATACGCGTGCACGGTGACCTGCGGTACCGTTCCCT
GCCCCGTGCCGCGTGTCTTGCTTGTCCCGGCAGACGATCCGACTGACGCGTCCCGACGATGTGAGAGAAACACAT
CGAGCGCAGGCGGACGATGGATTTCCTCGACACAGTCATAGGACACCCGCAGAACCGCCAGGTCGACTGGATCAC
CATCCATCCGCGCACAAGGCACACGCCCTCGAGCGTGCCCATCCGCACCGAGGCCCTTGAGATCCTCACCTCCCA
GTACGCCGCCACGCTCCCTATCCTGCTCTCCGGCGACGTCTTCGCCCTGTCCGCCCTCCCCTTCCAGTCCCCGCG
CGACCTCGTGACCTTCTCCTCTTCAGCCGGCACAACGGACGGCGACGGCGGCGGCACTTCGCTCCGGCCCAGCAC
CACCCGCCTGGCGGGCTTCATGTCCGCGCGCGGCCTCCTCGCCAACCCGGCCCTCTTCGCCGGCCACGCGGCCTG
CCCCTGGGAAGCCCTCGAGACCTTCATGTGCAACGTCGCGCGCTGCCCGCTGCCCTTCAAGCTCGTCGCCCACCA
CGTCGCGCAGATGTGCGGGCCCGGCATGGGGGCCGACAAGTCGGCTCTGCTGCCCAAGAAGGAGAGGGCCAAGCT
CACGGACCTGACCAACATGCTCGACCTCGTCGACTTCTTGGACGACAAGATGGAGCAGCAGACGGGGAGAAAGGG
GGGCCTGCGGCGAGACTTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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