© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|10978 |
| Gene name | |
| Location | Contig_94:2321..4068 |
| Strand | + |
| Gene length (bp) | 1747 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1518 |
| Protein length (aa) | 506 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.8E-19 | 92 | 436 |
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 9.3E-14 | 82 | 347 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9URX1|YLX5_SCHPO | UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC922.05c PE=3 SV=1 | 1 | 482 | 6.0E-147 |
| sp|Q8LG53|UN932_ARATH | UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2 | 49 | 473 | 2.0E-105 |
| sp|Q56WD3|UN931_ARATH | UNC93-like protein 1 OS=Arabidopsis thaliana GN=At1g18000 PE=2 SV=2 | 49 | 473 | 2.0E-105 |
| sp|O14237|YEL4_SCHPO | Uncharacterized membrane protein C6F6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.04c PE=4 SV=1 | 50 | 493 | 2.0E-52 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 92 | 109 | 17 |
| 3 | 114 | 136 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 180 | 199 | 19 |
| 6 | 212 | 234 | 22 |
| 7 | 268 | 285 | 17 |
| 8 | 306 | 328 | 22 |
| 9 | 338 | 355 | 17 |
| 10 | 387 | 409 | 22 |
| 11 | 448 | 470 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10978 MSSDQAKAGHEMAVDEATRQTPPDYVDFVDRPPGLLYKPFRLFGREVWYASPKVQLLMVSLVCFLCPGMYNSLTG LGGGGQVDATAQDHANVALYSTFAVVGFFAGTFANRLGLRLTLSIGGLGYCIYSASFLSYSHTQNVGFVIFSGAF LGLCAGLLWTAQGAIMMSYPPENSKGRYISWFWIIFNLGAVIGSLIPLAQNVNKKAGPVTDGTYIAFIILMFIGA CLSLMLVDANKVIREDNTKVILMKNPSWLSEFKGLWETLFNEPWILLLFPMFFASNFFYTYQNNDMNAAHFNTRT RALNNLLYWLAQIFGAILMGYCLDIHTIRRSVRGKIAFGFLVALTFIIWGGGWHWQKQQVSRQVAESKDYPGLVD WTDGGTRFVGPMFLYFFYGFYDAIWQTSIYWFMGSLSNSGRKAANLAGFYKSIQSFGASIAYYLDGSKKDYNTIF GLTWGLLAGSLLFALPVILFKIKDHVSMEDDLKFSDETIDDVVVGATEKADQPHV* |
| Coding | >Hirsu2|10978 ATGTCTTCCGACCAGGCCAAGGCCGGCCACGAGATGGCCGTCGATGAGGCCACCCGCCAAACCCCTCCCGACTAC GTCGACTTCGTCGACCGCCCCCCCGGCCTCCTGTACAAGCCATTCCGCCTCTTCGGCCGTGAGGTCTGGTATGCC TCGCCCAAGGTCCAGCTCCTCATGGTCTCCCTCGTCTGCTTCCTCTGTCCCGGCATGTACAACTCCCTCACCGGC CTCGGCGGCGGCGGCCAGGTCGACGCCACCGCCCAAGACCACGCCAACGTCGCCCTCTACAGCACCTTCGCCGTC GTCGGCTTCTTCGCCGGCACCTTCGCCAACCGCCTCGGCCTGCGCCTCACCCTGTCCATCGGCGGCCTCGGCTAT TGCATCTACAGCGCCTCCTTCCTCTCCTACTCCCACACCCAGAACGTCGGCTTCGTCATCTTCTCCGGCGCCTTC CTCGGCCTCTGCGCCGGCCTGCTCTGGACCGCTCAGGGCGCCATCATGATGTCCTACCCGCCCGAGAACAGCAAG GGCCGCTACATCTCCTGGTTCTGGATCATCTTCAATCTCGGCGCCGTCATCGGCTCCTTGATTCCGCTCGCGCAA AACGTCAACAAGAAGGCCGGTCCCGTCACCGACGGCACTTACATCGCCTTCATCATCCTCATGTTCATCGGCGCC TGCCTGTCCCTCATGCTGGTCGACGCCAACAAGGTGATCCGCGAGGACAACACCAAGGTCATCCTGATGAAAAAC CCGTCCTGGCTGAGCGAGTTCAAGGGCCTTTGGGAGACGCTCTTCAACGAGCCCTGGATCCTGCTGCTCTTCCCC ATGTTCTTCGCCTCCAACTTCTTCTACACCTACCAGAACAACGACATGAACGCCGCCCACTTCAACACCCGCACC CGAGCCCTCAACAACCTCCTCTACTGGTTGGCCCAGATCTTCGGCGCCATCCTCATGGGCTACTGTCTCGACATC CACACCATCCGCCGCAGCGTCCGCGGCAAGATCGCCTTTGGCTTCCTCGTCGCCCTGACCTTCATCATCTGGGGC GGCGGCTGGCACTGGCAGAAGCAGCAGGTCTCTCGCCAGGTGGCCGAGAGCAAGGACTACCCCGGCCTCGTCGAC TGGACCGACGGCGGCACCCGTTTCGTCGGGCCCATGTTCCTCTATTTCTTCTACGGCTTCTACGACGCCATCTGG CAGACCAGCATCTACTGGTTCATGGGGTCCCTGTCGAACTCGGGTCGCAAGGCCGCCAACCTGGCCGGCTTCTAC AAGTCGATCCAGTCGTTCGGTGCCAGCATAGCCTACTACCTGGACGGGAGCAAGAAGGACTACAACACCATCTTC GGGCTGACGTGGGGCCTGCTGGCCGGCTCCTTACTGTTTGCGCTGCCCGTCATCCTGTTTAAGATCAAGGACCAC GTGTCGATGGAGGACGACCTCAAGTTCAGCGACGAGACGATCGACGACGTGGTCGTGGGGGCGACGGAGAAGGCG GACCAGCCACACGTGTGA |
| Transcript | >Hirsu2|10978 ATGTCTTCCGACCAGGCCAAGGCCGGCCACGAGATGGCCGTCGATGAGGCCACCCGCCAAACCCCTCCCGACTAC GTCGACTTCGTCGACCGCCCCCCCGGCCTCCTGTACAAGCCATTCCGCCTCTTCGGCCGTGAGGTCTGGTATGCC TCGCCCAAGGTCCAGCTCCTCATGGTCTCCCTCGTCTGCTTCCTCTGTCCCGGCATGTACAACTCCCTCACCGGC CTCGGCGGCGGCGGCCAGGTCGACGCCACCGCCCAAGACCACGCCAACGTCGCCCTCTACAGCACCTTCGCCGTC GTCGGCTTCTTCGCCGGCACCTTCGCCAACCGCCTCGGCCTGCGCCTCACCCTGTCCATCGGCGGCCTCGGCTAT TGCATCTACAGCGCCTCCTTCCTCTCCTACTCCCACACCCAGAACGTCGGCTTCGTCATCTTCTCCGGCGCCTTC CTCGGCCTCTGCGCCGGCCTGCTCTGGACCGCTCAGGGCGCCATCATGATGTCCTACCCGCCCGAGAACAGCAAG GGCCGCTACATCTCCTGGTTCTGGATCATCTTCAATCTCGGCGCCGTCATCGGCTCCTTGATTCCGCTCGCGCAA AACGTCAACAAGAAGGCCGGTCCCGTCACCGACGGCACTTACATCGCCTTCATCATCCTCATGTTCATCGGCGCC TGCCTGTCCCTCATGCTGGTCGACGCCAACAAGGTGATCCGCGAGGACAACACCAAGGTCATCCTGATGAAAAAC CCGTCCTGGCTGAGCGAGTTCAAGGGCCTTTGGGAGACGCTCTTCAACGAGCCCTGGATCCTGCTGCTCTTCCCC ATGTTCTTCGCCTCCAACTTCTTCTACACCTACCAGAACAACGACATGAACGCCGCCCACTTCAACACCCGCACC CGAGCCCTCAACAACCTCCTCTACTGGTTGGCCCAGATCTTCGGCGCCATCCTCATGGGCTACTGTCTCGACATC CACACCATCCGCCGCAGCGTCCGCGGCAAGATCGCCTTTGGCTTCCTCGTCGCCCTGACCTTCATCATCTGGGGC GGCGGCTGGCACTGGCAGAAGCAGCAGGTCTCTCGCCAGGTGGCCGAGAGCAAGGACTACCCCGGCCTCGTCGAC TGGACCGACGGCGGCACCCGTTTCGTCGGGCCCATGTTCCTCTATTTCTTCTACGGCTTCTACGACGCCATCTGG CAGACCAGCATCTACTGGTTCATGGGGTCCCTGTCGAACTCGGGTCGCAAGGCCGCCAACCTGGCCGGCTTCTAC AAGTCGATCCAGTCGTTCGGTGCCAGCATAGCCTACTACCTGGACGGGAGCAAGAAGGACTACAACACCATCTTC GGGCTGACGTGGGGCCTGCTGGCCGGCTCCTTACTGTTTGCGCTGCCCGTCATCCTGTTTAAGATCAAGGACCAC GTGTCGATGGAGGACGACCTCAAGTTCAGCGACGAGACGATCGACGACGTGGTCGTGGGGGCGACGGAGAAGGCG GACCAGCCACACGTGTGA |
| Gene | >Hirsu2|10978 ATGTCTTCCGACCAGGCCAAGGCCGGCCACGAGATGGCCGTCGATGAGGCCACCCGCCAAACCCCTCCCGACTAC GTCGACTTCGTCGACCGCCCCCCCGGCCTCCTGTACAAGCCATTCCGCCTCTTCGGCCGTGAGGTCTGGTATGCC TCGCCCAAGGTCCAGCTCCTCATGGTCTCCCTCGTCTGCTTCCTCTGTCCCGGCATGTACAACTCCCTCACCGGC CTCGGCGGCGGCGGCCAGGTCGACGCCACCGCCCAAGACCACGCCAACGTCGCCCTCTACAGCACCTTCGCCGTC GTCGGCTTCTTCGCCGGCACCTTCGCCAACCGCCTCGGCCTGCGCCTCACCCTGTCCATCGGCGGCCTCGGCTAT TGCATCTACAGCGCCTCCTTCCTCTCCTACTCCCACACCCAGAACGTCGGCTTCGTCATCTTCTCCGGCGCCTTC CTCGGCCTCTGCGCCGGCCTGCTCTGGACCGCTCAGGGCGCCATCATGATGTCCTACCCGCCCGAGAACAGCAAG GGCCGCTACATCTCCTGGTTCTGGATCATCTTCAATCTCGGCGCCGTCATCGGCTCCTTGGTACGTCCCCCCTCC CCTTCAGAAACCTGGTGCGTGCGGCCCGGACCTCCTAACCTGGCTCCTCCGCGCGCCCGGCCCCCAATCTAGATT CCGCTCGCGCAAAACGTCAACAAGAAGGCCGGTCCCGTCACCGACGGCACTTACATCGCCTTCATCATCCTCATG TTCATCGGCGCCTGCCTGTCCCTCATGCTGGTCGACGCCAACAAGGTGATCCGCGAGGACAACACCAAGGTCATC CTGATGAAAAACCCGTCCTGGCTGAGCGAGTTCAAGGGCCTTTGGGAGACGCTCTTCAACGAGCCCTGGATCCTG CTGCTCTTCCCCATGTTCTTCGCCTCCAACTTCTTCTACACCTACCAGAACAACGACATGAACGCCGCCCACTTC AACACCCGCACCCGAGCCCTCAACAACCTCCTCTACTGGTTGGCCCAGATCTTCGGCGCCATCCTCATGGGCTAC TGTCTCGACATCCACACCATCCGCCGCAGCGTCCGCGGCAAGATCGCCTTTGGCTTCCTCGTCGCCCTGACCTTC ATCATCTGGGGCGGCGGCTGGCACTGGCAGAAGCAGCAGGTCTCTCGCCAGGTGGCCGAGAGCAAGGACTACCCC GGCCTCGTCGACTGGACCGACGGCGGCACCCGTTTCGTCGGGCCCATGTTCCTCTATTTCTTCTACGGCTTCTAC GACGCCATCTGGCAGACCAGCATCTACTGGTACGTCCCCTTCGCCGCCGGTGATTTTTCTTTTAGGGGGGGGGGG GGAAACCCGAGAGTGGAGTCGCTAACGGACGGTGTTGATAGGTTCATGGGGTCCCTGTCGAACTCGGGTCGCAAG GCCGCCAACCTGGCCGGTGAGTGGAAAGCAAGGAAGCGGAGCGCGCCGCCGACGCTGACTCGACCTCGCAGGCTT CTACAAGTCGATCCAGTCGTTCGGTGCCAGCATAGCCTACTACCTGGACGGGAGCAAGAAGGACTACAACACCAT CTTCGGGCTGACGTGGGGCCTGCTGGCCGGCTCCTTACTGTTTGCGCTGCCCGTCATCCTGTTTAAGATCAAGGA CCACGTGTCGATGGAGGACGACCTCAAGTTCAGCGACGAGACGATCGACGACGTGGTCGTGGGGGCGACGGAGAA GGCGGACCAGCCACACGTGTGA |