Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10965
Gene name
LocationContig_935:8235..9348
Strand+
Gene length (bp)1113
Transcript length (bp)741
Coding sequence length (bp)741
Protein length (aa) 247

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02104 SURF1 SURF1 family 5.0E-57 10 219

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y810|SHY1_SCHPO Cytochrome oxidase assembly protein shy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=shy1 PE=3 SV=1 7 231 8.0E-61
sp|P09925|SURF1_MOUSE Surfeit locus protein 1 OS=Mus musculus GN=Surf1 PE=1 SV=3 7 234 1.0E-47
sp|Q15526|SURF1_HUMAN Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1 7 236 8.0E-46
sp|Q9QXU2|SURF1_RAT Surfeit locus protein 1 OS=Rattus norvegicus GN=Surf1 PE=2 SV=1 7 236 1.0E-45
sp|A4IHH4|SURF1_XENTR Surfeit locus protein 1 OS=Xenopus tropicalis GN=surf1 PE=2 SV=1 7 231 1.0E-43
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y810|SHY1_SCHPO Cytochrome oxidase assembly protein shy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=shy1 PE=3 SV=1 7 231 8.0E-61
sp|P09925|SURF1_MOUSE Surfeit locus protein 1 OS=Mus musculus GN=Surf1 PE=1 SV=3 7 234 1.0E-47
sp|Q15526|SURF1_HUMAN Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1 7 236 8.0E-46
sp|Q9QXU2|SURF1_RAT Surfeit locus protein 1 OS=Rattus norvegicus GN=Surf1 PE=2 SV=1 7 236 1.0E-45
sp|A4IHH4|SURF1_XENTR Surfeit locus protein 1 OS=Xenopus tropicalis GN=surf1 PE=2 SV=1 7 231 1.0E-43
sp|Q800L1|SURF1_CHICK Surfeit locus protein 1 OS=Gallus gallus GN=SURF1 PE=3 SV=1 8 226 6.0E-43
sp|O57593|SURF1_TAKRU Surfeit locus protein 1 (Fragment) OS=Takifugu rubripes GN=surf1 PE=3 SV=1 7 226 2.0E-42
sp|Q9U4F3|SURF1_DROME SURF1-like protein OS=Drosophila melanogaster GN=Surf1 PE=2 SV=1 7 234 4.0E-42
sp|A8Y2C9|SURF1_CAEBR SURF1-like protein OS=Caenorhabditis briggsae GN=sft-1 PE=3 SV=1 6 224 3.0E-39
sp|A9UWF0|SURF1_MONBE SURF1-like protein OS=Monosiga brevicollis GN=18583 PE=3 SV=1 8 231 2.0E-38
sp|Q9N5N8|SURF1_CAEEL SURF1-like protein OS=Caenorhabditis elegans GN=sft-1 PE=3 SV=1 6 224 2.0E-37
sp|P53266|SHY1_YEAST Cytochrome oxidase assembly protein SHY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHY1 PE=1 SV=1 7 176 1.0E-33
sp|Q556J9|SURF1_DICDI SURF1-like protein OS=Dictyostelium discoideum GN=surf1-1 PE=3 SV=2 7 231 8.0E-33
sp|Q9SE51|SURF1_ARATH Surfeit locus protein 1 OS=Arabidopsis thaliana GN=SURF1 PE=2 SV=1 6 230 4.0E-18
sp|Q1RJM4|SURF1_RICBR SURF1-like protein OS=Rickettsia bellii (strain RML369-C) GN=RBE_0359 PE=3 SV=1 7 235 9.0E-16
sp|Q4UN32|SURF1_RICFE SURF1-like protein OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0175 PE=3 SV=1 7 236 4.0E-15
sp|Q92GL0|SURF1_RICCN SURF1-like protein OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=RC1113 PE=3 SV=1 7 231 7.0E-13
sp|Q9ZCJ8|SURF1_RICPR SURF1-like protein OS=Rickettsia prowazekii (strain Madrid E) GN=RP733 PE=3 SV=1 2 224 3.0E-09
sp|P66884|Y2259_MYCBO Uncharacterized SURF1-like protein Mb2259 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2259 PE=3 SV=1 18 193 8.0E-06
sp|P9WGA7|Y2235_MYCTU Uncharacterized SURF1-like protein Rv2235 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2235 PE=1 SV=1 18 193 8.0E-06
sp|P9WGA6|Y2235_MYCTO Uncharacterized SURF1-like protein MT2294 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2294 PE=3 SV=1 18 193 8.0E-06
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1757 0.1551 0.1213 0.2396 0.2251 0.0451 0.6858 0.1978 0.3432 0.0808

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 24 19
2 210 229 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1440
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3995
Ophiocordyceps australis map64 (Brazil) OphauB2|7459
Ophiocordyceps camponoti-floridani Ophcf2|06243
Ophiocordyceps camponoti-rufipedis Ophun1|7464
Ophiocordyceps kimflemingae Ophio5|3271
Ophiocordyceps subramaniannii Hirsu2|10965 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10965
MIRRIILLVLIPVTAFALGTWQVQRLSWKTELLAKLEDRLVRDPLPLPPHIDPTVVHEFDYRRVLATGRFRHDQE
MLIGPRMRDGQDGYMVVTPLERDDASTILVNRGWISKKHRSQKTRPDSLPRGQVTVEGLLRKPWKKNMFTPHNRP
DKGEFYFPDVEQMAALTGSQPVWIEATMEPEYMRMVDYEARGIPFGRPAEVNVRNNHAQYIFTWYSLCVATSVML
YLVLKKPTPNIARRVQAGRDL*
Coding >Hirsu2|10965
ATGATCCGGAGAATCATCCTGCTAGTCCTCATCCCCGTAACGGCATTCGCGCTCGGCACTTGGCAGGTCCAGCGA
CTGAGCTGGAAGACGGAACTGCTCGCAAAGTTGGAGGACCGCCTCGTGCGCGACCCTCTGCCCCTGCCGCCGCAC
ATCGACCCGACCGTCGTCCATGAGTTCGACTACCGACGGGTTCTGGCCACGGGCCGCTTCCGCCACGACCAGGAG
ATGCTCATTGGACCGCGCATGCGCGACGGCCAGGACGGCTACATGGTGGTGACGCCGCTTGAGCGCGACGACGCG
TCCACCATCCTCGTCAACAGGGGCTGGATCAGCAAGAAGCACCGCAGCCAAAAGACGCGCCCGGACTCCCTGCCG
CGGGGCCAAGTCACGGTCGAGGGGCTGCTGCGCAAGCCTTGGAAGAAGAACATGTTCACGCCGCACAACAGGCCC
GACAAGGGAGAGTTCTACTTCCCCGACGTGGAGCAGATGGCGGCGCTGACCGGCAGTCAGCCGGTCTGGATTGAA
GCTACCATGGAGCCCGAGTACATGAGAATGGTCGACTACGAGGCCCGTGGCATCCCCTTCGGACGGCCCGCCGAA
GTCAACGTGAGGAACAACCACGCCCAGTACATCTTTACCTGGTACAGCTTGTGCGTCGCCACATCAGTCATGCTA
TACTTGGTCCTCAAGAAACCGACGCCCAACATCGCCCGTCGCGTGCAAGCGGGCCGGGACTTGTAA
Transcript >Hirsu2|10965
ATGATCCGGAGAATCATCCTGCTAGTCCTCATCCCCGTAACGGCATTCGCGCTCGGCACTTGGCAGGTCCAGCGA
CTGAGCTGGAAGACGGAACTGCTCGCAAAGTTGGAGGACCGCCTCGTGCGCGACCCTCTGCCCCTGCCGCCGCAC
ATCGACCCGACCGTCGTCCATGAGTTCGACTACCGACGGGTTCTGGCCACGGGCCGCTTCCGCCACGACCAGGAG
ATGCTCATTGGACCGCGCATGCGCGACGGCCAGGACGGCTACATGGTGGTGACGCCGCTTGAGCGCGACGACGCG
TCCACCATCCTCGTCAACAGGGGCTGGATCAGCAAGAAGCACCGCAGCCAAAAGACGCGCCCGGACTCCCTGCCG
CGGGGCCAAGTCACGGTCGAGGGGCTGCTGCGCAAGCCTTGGAAGAAGAACATGTTCACGCCGCACAACAGGCCC
GACAAGGGAGAGTTCTACTTCCCCGACGTGGAGCAGATGGCGGCGCTGACCGGCAGTCAGCCGGTCTGGATTGAA
GCTACCATGGAGCCCGAGTACATGAGAATGGTCGACTACGAGGCCCGTGGCATCCCCTTCGGACGGCCCGCCGAA
GTCAACGTGAGGAACAACCACGCCCAGTACATCTTTACCTGGTACAGCTTGTGCGTCGCCACATCAGTCATGCTA
TACTTGGTCCTCAAGAAACCGACGCCCAACATCGCCCGTCGCGTGCAAGCGGGCCGGGACTTGTAA
Gene >Hirsu2|10965
ATGATCCGGAGTTCGTTTCCATCCTTGATGCGCCTCCTCAAATTGTCCGTGCCGGTCGGAGACACGGTCCAGGAA
TCATCCTGCTAGGTTCGTCGCACATCACCCACATTTGCGTCTGCCTTCCATCCGCCAGCACAGCTTGACGTCCGC
CAGCCACGCGGCACTGTTCTCCATTCTTCTTGACGATGAAATGAAATGAAAAATTTCACCCCCGTCTCCTGACCT
GCCGTCTTTCCCGCAGTCCTCATCCCCGTAACGGCATTCGCGCTCGGCACTTGGCAGGTCCAGCGACTGAGCTGG
AAGACGGAACTGCTCGCAAAGTTGGAGGACCGCCTCGTGCGCGACCCTCTGCCCCTGCCGCCGCACATCGACCCG
ACCGTCGTCCATGAGTTCGACTACCGACGGGTTCTGGCCACGGGCCGCTTCCGCCACGACCAGGAGATGCTCATT
GGACCGCGCATGCGCGACGGCCAGGACGGCTACATGGTGGTGACGCCGCTTGAGCGCGACGACGCGTCCACCATC
CTCGTCAACAGGGGCTGGATCAGCAAGAAGCACCGCAGCCAAAAGACGCGCCCGGACTCCCTGCCGCGGGGCCAA
GTCACGGTCGAGGGGCTGCTGCGCAAGCCTTGGAAGAAGAACATGTTCACGCCGCACAACAGGCCCGACAAGGGA
GAGTTCTACTTCCCCGACGTGGAGCAGATGGCGGCGCTGACCGGCAGTCAGCCGGTCTGGATTGAAGCTACCATG
GGTATGTGCCCCCGTCAGACCCACGGCTTGCTCGTCCCGTGAGCTAAGTCGACAGCAGAGCCCGAGTACATGAGA
ATGGTCGACTACGAGGCCCGTGGCATCCCCTTCGGACGGCCCGCCGAAGTCAACGTGAGGAACAACCACGCCCAG
TACATCTTTACCTGGTGTGTTCCCGTGCCGCCCCCGTCGTCCTCCCCCCCTCCTCCCCAAACGTCTCCCTCTCAT
ATGTCCACCTGCGGCATCTGGCTTACGCTGCCCTCAAGGTACAGCTTGTGCGTCGCCACATCAGTCATGCTATAC
TTGGTCCTCAAGAAACCGACGCCCAACATCGCCCGTCGCGTGCAAGCGGGCCGGGACTTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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