© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10959 |
| Gene name | |
| Location | Contig_934:3657..4511 |
| Strand | - |
| Gene length (bp) | 854 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03188 | Cytochrom_B561 | Eukaryotic cytochrome b561 | 6.9E-17 | 77 | 205 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q925G2|CYBR1_MOUSE | Cytochrome b reductase 1 OS=Mus musculus GN=Cybrd1 PE=1 SV=2 | 74 | 201 | 7.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 71 | 93 | 22 |
| 3 | 114 | 131 | 17 |
| 4 | 146 | 168 | 22 |
| 5 | 188 | 207 | 19 |
| 6 | 212 | 234 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10959 MASTAATVPADEVARPEATDTEPLLGRPGDVSQRRDGSFARNLVMGTGAVAQLGAVLLLVLIWASVLTHPLILFS AHPLLQSLAVFVLIQSVLSLQPTHTSEQKRLGQRVHASLNLVAFLLLVAGVSIIEYNKLASRGPHFHSVHGYLGV ISGIVLLLQYLVGFTMWATPALYGGEDRARAVWKYHRYSGYLVLVLLLATVCSATDTSYNDMVLHIKLWATVLAS VLVVVGVFPRIQKHKLGLATYSAAAQEAPRPRYSDQ* |
| Coding | >Hirsu2|10959 ATGGCCAGCACGGCGGCGACGGTGCCGGCGGACGAGGTGGCGCGGCCGGAAGCCACGGACACGGAGCCGCTGCTG GGGCGGCCCGGCGACGTCAGCCAGCGCCGAGATGGCTCCTTTGCCCGGAACCTCGTCATGGGCACGGGCGCCGTG GCCCAGCTCGGGGCCGTCCTCCTCCTCGTCCTCATCTGGGCCTCGGTCCTCACCCACCCGCTGATACTGTTCTCG GCTCACCCGCTGCTGCAGTCGCTGGCCGTCTTCGTCCTGATCCAGTCGGTGCTGTCGCTGCAGCCGACGCACACG AGTGAGCAGAAGCGGCTGGGCCAGCGCGTGCACGCCTCGCTCAACCTCGTCGCCTTCCTGCTGCTCGTGGCCGGC GTGAGCATCATCGAGTACAACAAGCTGGCCAGCCGCGGCCCGCACTTCCACTCCGTCCACGGCTACCTGGGCGTC ATCAGCGGCATCGTCCTGCTGCTGCAGTACCTCGTCGGCTTCACCATGTGGGCCACGCCCGCCCTCTACGGCGGC GAGGACCGGGCCCGCGCCGTCTGGAAGTACCACCGCTACTCGGGCTACCTCGTCCTCGTCCTCCTGCTCGCCACC GTCTGCAGCGCGACCGACACCTCGTACAACGACATGGTGTTGCACATCAAGCTCTGGGCCACCGTCCTCGCCTCC GTCCTCGTCGTCGTCGGCGTCTTCCCCCGCATCCAGAAGCACAAGCTCGGCCTGGCCACCTACTCCGCCGCCGCG CAGGAAGCCCCGAGACCGCGCTACTCCGACCAATAA |
| Transcript | >Hirsu2|10959 ATGGCCAGCACGGCGGCGACGGTGCCGGCGGACGAGGTGGCGCGGCCGGAAGCCACGGACACGGAGCCGCTGCTG GGGCGGCCCGGCGACGTCAGCCAGCGCCGAGATGGCTCCTTTGCCCGGAACCTCGTCATGGGCACGGGCGCCGTG GCCCAGCTCGGGGCCGTCCTCCTCCTCGTCCTCATCTGGGCCTCGGTCCTCACCCACCCGCTGATACTGTTCTCG GCTCACCCGCTGCTGCAGTCGCTGGCCGTCTTCGTCCTGATCCAGTCGGTGCTGTCGCTGCAGCCGACGCACACG AGTGAGCAGAAGCGGCTGGGCCAGCGCGTGCACGCCTCGCTCAACCTCGTCGCCTTCCTGCTGCTCGTGGCCGGC GTGAGCATCATCGAGTACAACAAGCTGGCCAGCCGCGGCCCGCACTTCCACTCCGTCCACGGCTACCTGGGCGTC ATCAGCGGCATCGTCCTGCTGCTGCAGTACCTCGTCGGCTTCACCATGTGGGCCACGCCCGCCCTCTACGGCGGC GAGGACCGGGCCCGCGCCGTCTGGAAGTACCACCGCTACTCGGGCTACCTCGTCCTCGTCCTCCTGCTCGCCACC GTCTGCAGCGCGACCGACACCTCGTACAACGACATGGTGTTGCACATCAAGCTCTGGGCCACCGTCCTCGCCTCC GTCCTCGTCGTCGTCGGCGTCTTCCCCCGCATCCAGAAGCACAAGCTCGGCCTGGCCACCTACTCCGCCGCCGCG CAGGAAGCCCCGAGACCGCGCTACTCCGACCAATAA |
| Gene | >Hirsu2|10959 ATGGCCAGCACGGCGGCGACGGTGCCGGCGGACGAGGTGGCGCGGCCGGAAGCCACGGACACGGAGCCGCTGCTG GGGCGGCCCGGCGACGTCAGCCAGCGCCGAGATGGCTCCTTTGCCCGGAACCTCGTCATGGGTGAGTCGGGGCGG GAATGGCTGGTCGACTGACGTCGGACGACGACGGCTGACGCTTCTCTCTCCCAGGCACGGGCGCCGTGGCCCAGC TCGGGGCCGTCCTCCTCCTCGTCCTCATCTGGGCCTCGGTCCTCACCCACCCGCTGATACTGTTCTCGGCTCACC CGCTGCTGCAGTCGCTGGCCGTCTTCGTCCTGATCCAGTCGGTGCTGTCGCTGCAGCCGACGCACACGAGTGAGC AGAAGCGGCTGGGCCAGCGCGTGCACGCCTCGCTCAACCTCGTCGCCTTCCTGCTGCTCGTGGCCGGCGTGAGCA TCATCGAGTACAACAAGCTGGCCAGCCGCGGCCCGCACTTCCACTCCGTCCACGGCTACCTGGGCGTCATCAGCG GCATCGTCCTGCTGCTGCAGTACCTCGTCGGCTTCACCATGTGGGCCACGCCCGCCCTCTACGGCGGCGAGGACC GGGCCCGCGCCGTCTGGAAGTACCACCGCTACTCGGGCTACCTCGTCCTCGTCCTCCTGCTCGCCACCGTCTGCA GCGCGACCGACACCTCGTACAACGACATGGTGTTGCACATCAAGCTCTGGGCCACCGTCCTCGCCTCCGTCCTCG TCGTCGTCGGCGTCTTCCCCCGCATCCAGAAGCACAAGCTCGGCCTGGCCACCTACTCCGCCGCCGCGCAGGAAG CCCCGAGACCGCGCTACTCCGACCAATAA |