© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10956 |
| Gene name | |
| Location | Contig_933:6574..7111 |
| Strand | + |
| Gene length (bp) | 537 |
| Transcript length (bp) | 537 |
| Coding sequence length (bp) | 537 |
| Protein length (aa) | 179 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0617 | 0.0715 | 0.98 | 0.061 | 0.0636 | 0.0096 | 0.0477 | 0.0423 | 0.0486 | 0.0047 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999471 |
| Orthofinder run ID | 4 |
| Orthogroup | 6010 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10956 MKPGSITAAVLALAGNAIAAPSTMSESSLENMGLMKRDVSAAQCLKFLCCRNKRDLSATESLQHQSAEAQATCLV CWKFGICGQAVRERPTKDGSDRAGRVRVEINQNIINNHQNFQNGGFWIQRGGREYWVDNNGQYWEWMGNDGDWDG GRREQFRMGGHGHVEKGRGGKWHYVFLD* |
| Coding | >Hirsu2|10956 ATGAAGCCCGGGTCCATCACCGCCGCCGTCCTGGCCCTGGCCGGAAACGCCATCGCCGCCCCCTCGACCATGAGC GAGAGCTCGCTGGAGAACATGGGCCTGATGAAGCGTGACGTCTCGGCCGCGCAGTGCCTCAAGTTCCTCTGCTGC CGCAACAAGCGCGACCTGTCCGCCACCGAGAGCCTGCAGCACCAGTCGGCCGAGGCCCAGGCCACCTGCCTGGTC TGCTGGAAGTTCGGCATCTGCGGCCAGGCCGTCCGGGAACGCCCGACCAAGGACGGCTCCGACCGCGCCGGCCGC GTCCGCGTCGAGATCAACCAGAACATCATCAACAACCACCAGAACTTCCAGAACGGTGGCTTCTGGATCCAGCGC GGCGGCCGCGAGTACTGGGTCGACAACAACGGCCAGTACTGGGAGTGGATGGGCAACGACGGCGACTGGGACGGT GGCCGCCGCGAGCAGTTCCGCATGGGCGGCCACGGCCACGTCGAGAAGGGCCGCGGTGGCAAGTGGCACTACGTC TTCCTCGACTAA |
| Transcript | >Hirsu2|10956 ATGAAGCCCGGGTCCATCACCGCCGCCGTCCTGGCCCTGGCCGGAAACGCCATCGCCGCCCCCTCGACCATGAGC GAGAGCTCGCTGGAGAACATGGGCCTGATGAAGCGTGACGTCTCGGCCGCGCAGTGCCTCAAGTTCCTCTGCTGC CGCAACAAGCGCGACCTGTCCGCCACCGAGAGCCTGCAGCACCAGTCGGCCGAGGCCCAGGCCACCTGCCTGGTC TGCTGGAAGTTCGGCATCTGCGGCCAGGCCGTCCGGGAACGCCCGACCAAGGACGGCTCCGACCGCGCCGGCCGC GTCCGCGTCGAGATCAACCAGAACATCATCAACAACCACCAGAACTTCCAGAACGGTGGCTTCTGGATCCAGCGC GGCGGCCGCGAGTACTGGGTCGACAACAACGGCCAGTACTGGGAGTGGATGGGCAACGACGGCGACTGGGACGGT GGCCGCCGCGAGCAGTTCCGCATGGGCGGCCACGGCCACGTCGAGAAGGGCCGCGGTGGCAAGTGGCACTACGTC TTCCTCGACTAA |
| Gene | >Hirsu2|10956 ATGAAGCCCGGGTCCATCACCGCCGCCGTCCTGGCCCTGGCCGGAAACGCCATCGCCGCCCCCTCGACCATGAGC GAGAGCTCGCTGGAGAACATGGGCCTGATGAAGCGTGACGTCTCGGCCGCGCAGTGCCTCAAGTTCCTCTGCTGC CGCAACAAGCGCGACCTGTCCGCCACCGAGAGCCTGCAGCACCAGTCGGCCGAGGCCCAGGCCACCTGCCTGGTC TGCTGGAAGTTCGGCATCTGCGGCCAGGCCGTCCGGGAACGCCCGACCAAGGACGGCTCCGACCGCGCCGGCCGC GTCCGCGTCGAGATCAACCAGAACATCATCAACAACCACCAGAACTTCCAGAACGGTGGCTTCTGGATCCAGCGC GGCGGCCGCGAGTACTGGGTCGACAACAACGGCCAGTACTGGGAGTGGATGGGCAACGACGGCGACTGGGACGGT GGCCGCCGCGAGCAGTTCCGCATGGGCGGCCACGGCCACGTCGAGAAGGGCCGCGGTGGCAAGTGGCACTACGTC TTCCTCGACTAA |