Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10950
Gene name
Location	Contig_931:9945..10548
Strand	+
Gene length (bp)	603
Transcript length (bp)	432
Coding sequence length (bp)	432
Protein length (aa)	144

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01755	Glyco_transf_25	Glycosyltransferase family 25 (LPS biosynthesis protein)	9.9E-08	74	142

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 28	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	10	27	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10950 MGRAISPRRSLWALGTVLVLFVLLVLRREQLMAAGGPRPQYFLKAKPARAAIARPSPPGASPDTIQNSTLGFERI FVVSLPTRTDRRDAFALQAAVTDIHFEFVDGVRGSDMAENAIPKTEAGQHIADAELGCWRSHMNVMQE*
Coding	>Hirsu2\|10950 ATGGGCCGCGCCATCTCGCCCAGGCGATCGCTATGGGCTCTCGGGACCGTCCTCGTTCTGTTCGTGCTGCTGGTC CTTCGCAGGGAGCAGCTGATGGCGGCCGGGGGACCTCGGCCGCAGTACTTCCTGAAAGCGAAGCCGGCTCGAGCG GCGATCGCGCGGCCGAGTCCTCCCGGCGCATCCCCGGACACCATCCAGAACAGCACGCTGGGCTTCGAGCGGATC TTCGTCGTCAGCCTGCCCACGCGGACGGACCGGCGCGATGCCTTTGCCCTCCAGGCGGCCGTGACCGACATACAC TTCGAGTTCGTTGACGGCGTGCGCGGCTCGGACATGGCGGAGAATGCCATCCCGAAAACCGAGGCCGGGCAGCAC ATCGCCGATGCCGAGCTGGGCTGCTGGCGAAGCCACATGAACGTGATGCAAGAGTGA
Transcript	>Hirsu2\|10950 ATGGGCCGCGCCATCTCGCCCAGGCGATCGCTATGGGCTCTCGGGACCGTCCTCGTTCTGTTCGTGCTGCTGGTC CTTCGCAGGGAGCAGCTGATGGCGGCCGGGGGACCTCGGCCGCAGTACTTCCTGAAAGCGAAGCCGGCTCGAGCG GCGATCGCGCGGCCGAGTCCTCCCGGCGCATCCCCGGACACCATCCAGAACAGCACGCTGGGCTTCGAGCGGATC TTCGTCGTCAGCCTGCCCACGCGGACGGACCGGCGCGATGCCTTTGCCCTCCAGGCGGCCGTGACCGACATACAC TTCGAGTTCGTTGACGGCGTGCGCGGCTCGGACATGGCGGAGAATGCCATCCCGAAAACCGAGGCCGGGCAGCAC ATCGCCGATGCCGAGCTGGGCTGCTGGCGAAGCCACATGAACGTGATGCAAGAGTGA
Gene	>Hirsu2\|10950 ATGGGCCGCGCCATCTCGCCCAGGCGATCGCTATGGGCTCTCGGGACCGTCCTCGTTCTGTTCGTGCTGCTGGTC CTTCGCAGGGAGCAGCTGATGGCGGCCGGGGGACCTCGGCCGCAGTACTTCCTGAAAGCGAAGCCGGCTCGAGCG GCGATCGCGCGGCCGAGTCCTCCCGGCGCATCCCCGGACACCATCCAGAACAGCACGCTGGGCGTGAGTTGGAAC CTGCTTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTGTGTCGTGTGTCGCTCGCTTCCCCCCCC TCCCCCCACCCAAGGTGCTGATGAAGACGTGTGCTGTTCGCGGAACAAACTCTGACGGGGCGCTCACGCCCTTGG CGCACGTAGTTCGAGCGGATCTTCGTCGTCAGCCTGCCCACGCGGACGGACCGGCGCGATGCCTTTGCCCTCCAG GCGGCCGTGACCGACATACACTTCGAGTTCGTTGACGGCGTGCGCGGCTCGGACATGGCGGAGAATGCCATCCCG AAAACCGAGGCCGGGCAGCACATCGCCGATGCCGAGCTGGGCTGCTGGCGAAGCCACATGAACGTGATGCAAGAG TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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