© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10944 |
| Gene name | |
| Location | Contig_93:38525..39965 |
| Strand | - |
| Gene length (bp) | 1440 |
| Transcript length (bp) | 1224 |
| Coding sequence length (bp) | 1224 |
| Protein length (aa) | 408 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13938|YEP4_SCHPO | UPF0658 Golgi apparatus membrane protein C23H3.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.04 PE=3 SV=3 | 66 | 377 | 5.0E-50 |
| sp|Q9UUJ8|YLOA_SCHPO | UPF0658 Golgi apparatus membrane protein C1952.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.10c PE=3 SV=1 | 68 | 407 | 3.0E-35 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 55 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 72 | 94 | 22 |
| 2 | 114 | 136 | 22 |
| 3 | 143 | 165 | 22 |
| 4 | 198 | 220 | 22 |
| 5 | 246 | 268 | 22 |
| 6 | 278 | 297 | 19 |
| 7 | 304 | 322 | 18 |
| 8 | 342 | 364 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10944 LATSHYDHGRDPSREYGQAYPQAAYHQPAYAENANLNHSFDQGYAHRQGMAPSTPARSVYHDRVGFLKTKWPAAF MAVTSLQAVVCLGFESYVFAKFQTSLGLWVDKPEVQSQYKTIPTFLTLFIFGFLYELVVVWDALRMKNTIQVIGV CIANLALLVYTAIQVDQIQTALEVLGRESALKLGITPAQLWADVRPFLIAIPAIIALATVVMMFIAWKLYQEFAW DILKNIGADYRMKKRFLHYQIYIALLKFDFFFFLGFIIQFVVVVAQKSDPEFALTIATIPITIGILLAAAYFTRR ENKAGMMVIIILYLGGLTYFIFKLCRIYQPEYQESYKAVRKSLTAFAVITILLILLTIINAIICMRNFDKGLKAH LLSSRRVEEKPDAHSISLHDVKPQLPSRMTID* |
| Coding | >Hirsu2|10944 CTGGCTACCAGTCACTACGACCACGGCCGCGACCCCTCGAGAGAATACGGCCAGGCTTATCCCCAAGCCGCCTAT CACCAGCCCGCCTACGCTGAGAATGCCAACCTGAACCACAGCTTCGACCAAGGCTACGCTCACCGACAAGGCATG GCGCCCTCTACTCCAGCCCGAAGCGTCTACCACGACAGGGTCGGCTTCCTCAAGACCAAGTGGCCCGCCGCCTTC ATGGCCGTCACCAGCCTGCAGGCCGTCGTCTGCCTTGGCTTCGAGTCATACGTCTTCGCCAAGTTCCAGACCAGT CTCGGCCTGTGGGTGGACAAGCCCGAGGTCCAGTCTCAGTACAAGACGATCCCTACCTTCTTGACCCTCTTCATC TTCGGCTTCCTCTACGAGCTGGTCGTTGTCTGGGACGCCCTGCGCATGAAGAACACCATCCAGGTCATTGGCGTC TGCATCGCCAACCTGGCCCTGCTCGTCTACACCGCCATCCAGGTCGACCAGATCCAGACGGCCCTCGAGGTCTTG GGGCGCGAGTCGGCCCTCAAGCTCGGCATCACCCCCGCCCAGCTCTGGGCCGACGTCAGGCCCTTTCTCATTGCC ATCCCCGCCATCATCGCCCTCGCCACCGTCGTCATGATGTTTATTGCCTGGAAGCTCTACCAGGAGTTTGCCTGG GACATCCTCAAGAACATCGGCGCCGACTACCGCATGAAGAAGCGCTTCCTGCACTACCAGATCTACATTGCCCTG CTCAAGTTCGATTTCTTCTTCTTCCTCGGCTTCATCATCCAGTTCGTCGTCGTCGTCGCCCAGAAGTCGGACCCC GAGTTCGCCCTGACCATTGCCACCATCCCCATCACCATCGGCATCCTGCTCGCCGCCGCCTACTTCACCCGCCGG GAGAACAAGGCCGGCATGATGGTCATCATCATCCTCTACCTCGGCGGCCTCACCTACTTCATCTTCAAGCTGTGC CGCATCTACCAGCCCGAGTACCAGGAATCCTACAAGGCCGTGCGCAAGTCCCTCACCGCCTTCGCCGTCATCACC ATCCTCCTCATCCTCCTCACCATCATCAACGCCATCATCTGCATGCGCAACTTCGACAAGGGGCTCAAGGCACAC CTGCTGTCCTCGCGGCGAGTGGAAGAGAAGCCCGACGCCCACTCCATCAGTCTGCACGACGTCAAGCCCCAGCTG CCCAGCCGCATGACCATCGACTGA |
| Transcript | >Hirsu2|10944 CTGGCTACCAGTCACTACGACCACGGCCGCGACCCCTCGAGAGAATACGGCCAGGCTTATCCCCAAGCCGCCTAT CACCAGCCCGCCTACGCTGAGAATGCCAACCTGAACCACAGCTTCGACCAAGGCTACGCTCACCGACAAGGCATG GCGCCCTCTACTCCAGCCCGAAGCGTCTACCACGACAGGGTCGGCTTCCTCAAGACCAAGTGGCCCGCCGCCTTC ATGGCCGTCACCAGCCTGCAGGCCGTCGTCTGCCTTGGCTTCGAGTCATACGTCTTCGCCAAGTTCCAGACCAGT CTCGGCCTGTGGGTGGACAAGCCCGAGGTCCAGTCTCAGTACAAGACGATCCCTACCTTCTTGACCCTCTTCATC TTCGGCTTCCTCTACGAGCTGGTCGTTGTCTGGGACGCCCTGCGCATGAAGAACACCATCCAGGTCATTGGCGTC TGCATCGCCAACCTGGCCCTGCTCGTCTACACCGCCATCCAGGTCGACCAGATCCAGACGGCCCTCGAGGTCTTG GGGCGCGAGTCGGCCCTCAAGCTCGGCATCACCCCCGCCCAGCTCTGGGCCGACGTCAGGCCCTTTCTCATTGCC ATCCCCGCCATCATCGCCCTCGCCACCGTCGTCATGATGTTTATTGCCTGGAAGCTCTACCAGGAGTTTGCCTGG GACATCCTCAAGAACATCGGCGCCGACTACCGCATGAAGAAGCGCTTCCTGCACTACCAGATCTACATTGCCCTG CTCAAGTTCGATTTCTTCTTCTTCCTCGGCTTCATCATCCAGTTCGTCGTCGTCGTCGCCCAGAAGTCGGACCCC GAGTTCGCCCTGACCATTGCCACCATCCCCATCACCATCGGCATCCTGCTCGCCGCCGCCTACTTCACCCGCCGG GAGAACAAGGCCGGCATGATGGTCATCATCATCCTCTACCTCGGCGGCCTCACCTACTTCATCTTCAAGCTGTGC CGCATCTACCAGCCCGAGTACCAGGAATCCTACAAGGCCGTGCGCAAGTCCCTCACCGCCTTCGCCGTCATCACC ATCCTCCTCATCCTCCTCACCATCATCAACGCCATCATCTGCATGCGCAACTTCGACAAGGGGCTCAAGGCACAC CTGCTGTCCTCGCGGCGAGTGGAAGAGAAGCCCGACGCCCACTCCATCAGTCTGCACGACGTCAAGCCCCAGCTG CCCAGCCGCATGACCATCGACTGA |
| Gene | >Hirsu2|10944 CTGGCTACCAGGTTAGATTCTCGCAAGTCCCTGCTGGGCCCAGATCCGGACTTCTCACAGCTCAGCCCGCAACAC AGTCACTACGACCACGGCCGCGACCCCTCGAGAGAATACGGCCAGGCTTATCCCCAAGCCGCCTATCACCAGCCC GCCTACGCTGAGAATGCCAACCTGAACCACAGCTTCGACCAAGGCTACGCTCACCGACAAGGCATGGCGCCCTCT ACTCCAGCCCGAAGCGTCTACCACGACAGGGTCGGCTTCCTCAAGACCAAGTGGCCCGCCGCCTTCATGGCCGTC ACCAGCCTGCAGGCCGTCGTCTGCCTTGGCTTCGAGTCGTACGTTCGCCCCTCCGCCGCCCTCTGCCCCGTCTCG CCCTCGACGCCCCCTCATACACCTTTGACTGACGCTCCCTCTTCCCCTCAGATACGTCTTCGCCAAGTTCCAGAC CAGTCTCGGCCTGTGGGTGGACAAGCCCGAGGTCCAGTCTCAGTACAAGACGATCCCTACCTTCTTGACCCTCTT CATCTTCGGCTTCCTCTACGAGCTGGTCGTTGTCTGGGACGCCCTGCGCATGAAGAACACCATCCAGGTCATTGG CGTCTGCATCGCCAACCTGGCCCTGCTCGTCTACACCGCCATCCAGGTCGACCAGATCCAGACGGCCCTCGAGGT CTTGGGGCGCGAGTCGGCCCTCAAGCTCGGCATCACCCCCGCCCAGCTCTGGGCCGACGTCAGGCCCTTTCTCAT TGCCATCCCCGCCATCATCGCCCTCGCCACCGTCGTCATGATGTTTATTGCCTGGAAGCTCTACCAGGAGTTTGC CTGGGACATCCTCAAGAACATCGGCGCCGACTACCGCATGAAGAAGCGCTTCCTGCACTACCAGGTCAATTGCTG CCCGCTCCCCGCCGAGGACCCTCGTCGGGCCGCGTGCTGACTGCCCGCCAGATCTACATTGCCCTGCTCAAGTTC GATTTCTTCTTCTTCCTCGGCTTCATCATCCAGTTCGTCGTCGTCGTCGCCCAGAAGTCGGACCCCGAGTTCGCC CTGACCATTGCCACCATCCCCATCACCATCGGCATCCTGCTCGCCGCCGCCTACTTCACCCGCCGGGAGAACAAG GCCGGCATGATGGTCATCATCATCCTCTACCTCGGCGGCCTCACCTACTTCATCTTCAAGCTGTGCCGCATCTAC CAGCCCGAGTACCAGGAATCCTACAAGGCCGTGCGCAAGTCCCTCACCGCCTTCGCCGTCATCACCATCCTCCTC ATCCTCCTCACCATCATCAACGCCATCATCTGCATGCGCAACTTCGACAAGGGGCTCAAGGCACACCTGCTGTCC TCGCGGCGAGTGGAAGAGAAGCCCGACGCCCACTCCATCAGTCTGCACGACGTCAAGCCCCAGCTGCCCAGCCGC ATGACCATCGACTGA |