Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Hirsu2|10938
Gene name
Location	Contig_93:22030..24428
Strand	-
Gene length (bp)	2398
Transcript length (bp)	2238
Coding sequence length (bp)	2238
Protein length (aa)	746

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00172	Zn_clus	Fungal Zn(2)-Cys(6) binuclear cluster domain	6.4E-06	74	110

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|P08638|LEUR_YEAST	Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1	51	635	3.0E-38
sp|Q59UY7|SEF1_CANAL	Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1	75	630	2.0E-18
sp|P87164|SEF1_KLULA	Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3	202	460	1.0E-13
sp|Q74Z37|SEF1_ASHGO	Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1	202	538	2.0E-11
sp|P34228|SEF1_YEAST	Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4	216	640	7.0E-10

GO

GO Term	Description	Terminal node
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Yes
GO:0008270	zinc ion binding	Yes
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0005634	nucleus	Yes
GO:0043169	cation binding	No
GO:0065007	biological regulation	No
GO:0010468	regulation of gene expression	No
GO:0019222	regulation of metabolic process	No
GO:0050794	regulation of cellular process	No
GO:0005488	binding	No
GO:0046872	metal ion binding	No
GO:0043229	intracellular organelle	No
GO:0008150	biological_process	No
GO:0051252	regulation of RNA metabolic process	No
GO:0009889	regulation of biosynthetic process	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0043226	organelle	No
GO:0003674	molecular_function	No
GO:0005575	cellular_component	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0043227	membrane-bounded organelle	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0043167	ion binding	No
GO:0044424	intracellular part	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0050789	regulation of biological process	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0044464	cell part	No
GO:0031323	regulation of cellular metabolic process	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0080090	regulation of primary metabolic process	No
GO:2000112	regulation of cellular macromolecule biosynthetic process	No
GO:0140110	transcription regulator activity	No
GO:0003700	DNA-binding transcription factor activity	No
GO:0046914	transition metal ion binding	No
GO:0031326	regulation of cellular biosynthetic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2|10938 MDGPSIVARGAASMSPTSPSSSRYGNGGAKRKRSSGIAPVESSPGSFLDDDHVDNADAGDHGDHDKKRQPGVKRA CNECRQQKLRCDVVQDPFQSCSRCNRLKLECKIESNFKRVGKRSKHAEMEKEIERLRRNVARARAQGYVPDDDDD VDSPVAPTATTFTHTRNPSLMGSDEAVSSLLHLKRGGSYNLQQHYSHELEAVRLTDNNVENLFNEFFAFYHPFLP FLSPQQPPDTYKQQHPLLFWSIIAVAARRFSPADCPNLLTNLSGPMTRYLWTTIGEVPSNYHVVKAMCLLCAWPL PTSTTTSDPTHILCGVMMKTATGIGLHRPNHIRDFSRVSVELNTEQLHDRVTTWAVCNIVAQNVGTGYGQPASTL YDWTLALRPGDDPALHLSRELEARLQIERFCDKVSKEMYSNASDPRGVAGDEHRAMLMRVYRRDYGELQASIRSQ QLGPIVLLHLRAAALHMRLAGFFDSSKTPGYMDDLMGLWRAATSFLDGILDADKVMSPNENAGSAFLVYSTNYLQ QMLVAAAFTLLKLMRSFFCKTIDFDRGRSLFHHSIKAIRATSVVNNDLQWRLAELMVQMWNGARLENSRNHALNS DDDSAIQVDDSLQLKVRCRHSMSLVFDSVWRWREEYQSQGRGSLENMRHPTNPDSTNESSASSSQLESTLVPSHL STASNNLLGANGALTPGATGISATASGPNSMIGGGMGYGDANNDFFDPQHWMLDGLVDFNYSFVPPLEGA*
Coding	>Hirsu2|10938 ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC TGCAACGAATGCCGCCAGCAAAAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGCTGCTCCCGGTGTAAC CGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAGCACGCCGAAATGGAA AAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCCGACGACGACGACGAT GTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTCATGGGCTCCGACGAG GCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTACTCTCACGAGCTCGAG GCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTACCACCCCTTCCTCCCC TTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGGTCCATCATCGCCGTC GCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCCATGACGCGCTACCTG TGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTCTGCGCCTGGCCCCTG CCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACTGCCACCGGCATCGGC CTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAACAGCTGCACGACCGT GTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAGCCTGCCTCCACCCTC TACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAACTCGAGGCTAGGCTG CAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCCCGTGGCGTCGCCGGC GACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCCTCTATCCGCTCCCAG CAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCCGGCTTCTTCGACTCG AGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTCCTCGACGGCATCCTC GACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCGACCAACTATCTGCAG CAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAGACCATCGACTTCGAC CGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAACAATGACCTGCAGTGG CGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAACCACGCGCTCAACAGC GACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCACAGCATGAGCCTCGTC TTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAAAACATGAGACACCCG ACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCCGTCACACCTG TCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTCCGCCACGGCG TCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGATCCCCAGCAT TGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG
Transcript	>Hirsu2|10938 ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC TGCAACGAATGCCGCCAGCAAAAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGCTGCTCCCGGTGTAAC CGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAGCACGCCGAAATGGAA AAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCCGACGACGACGACGAT GTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTCATGGGCTCCGACGAG GCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTACTCTCACGAGCTCGAG GCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTACCACCCCTTCCTCCCC TTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGGTCCATCATCGCCGTC GCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCCATGACGCGCTACCTG TGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTCTGCGCCTGGCCCCTG CCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACTGCCACCGGCATCGGC CTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAACAGCTGCACGACCGT GTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAGCCTGCCTCCACCCTC TACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAACTCGAGGCTAGGCTG CAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCCCGTGGCGTCGCCGGC GACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCCTCTATCCGCTCCCAG CAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCCGGCTTCTTCGACTCG AGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTCCTCGACGGCATCCTC GACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCGACCAACTATCTGCAG CAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAGACCATCGACTTCGAC CGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAACAATGACCTGCAGTGG CGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAACCACGCGCTCAACAGC GACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCACAGCATGAGCCTCGTC TTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAAAACATGAGACACCCG ACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCCGTCACACCTG TCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTCCGCCACGGCG TCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGATCCCCAGCAT TGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG
Gene	>Hirsu2|10938 ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC TGCAACGAATGCCGCCAGCAAAAGGTGAGTGAGTCACGGCCACTGCCTGGCCGCCACAGCTCCTTCTCGTCGCCC AACTGCCCGTCATCCCAAGCTGACCGCCTGGCACGGTAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGC TGCTCCCGGTGTAACCGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAG CACGCCGAAATGGAAAAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCC GACGACGACGACGATGTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTC ATGGGCTCCGACGAGGCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTAC TCTCACGAGCTCGAGGCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTAC CACCCCTTCCTCCCCTTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGG TCCATCATCGCCGTCGCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCC ATGACGCGCTACCTGTGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTC TGCGCCTGGCCCCTGCCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACT GCCACCGGCATCGGCCTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAA CAGCTGCACGACCGTGTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAG CCTGCCTCCACCCTCTACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAA CTCGAGGCTAGGCTGCAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCC CGTGGCGTCGCCGGCGACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCC TCTATCCGCTCCCAGCAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCC GGCTTCTTCGACTCGAGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTC CTCGACGGCATCCTCGACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCG ACCAACTATCTGCAGCAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAG ACCATCGACTTCGACCGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAAC AATGACCTGCAGTGGCGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAAC CACGCGCTCAACAGCGACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCAC AGCATGAGCCTCGTCTTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAA AGTGAGTGTCGGCCCCCTTTCCATCTCCCACTCGGCAATGAGGCAACTCATGACCGCCATTGTCCCATCAGACAT GAGACACCCGACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCC GTCACACCTGTCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTC CGCCACGGCGTCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGA TCCCCAGCATTGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG