Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10938
Gene name
LocationContig_93:22030..24428
Strand-
Gene length (bp)2398
Transcript length (bp)2238
Coding sequence length (bp)2238
Protein length (aa) 746

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 6.4E-06 74 110

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P08638|LEUR_YEAST Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1 51 635 3.0E-38
sp|Q59UY7|SEF1_CANAL Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 75 630 2.0E-18
sp|P87164|SEF1_KLULA Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3 202 460 1.0E-13
sp|Q74Z37|SEF1_ASHGO Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 202 538 2.0E-11
sp|P34228|SEF1_YEAST Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 216 640 7.0E-10

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0005634 nucleus Yes
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:0010468 regulation of gene expression No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0005488 binding No
GO:0046872 metal ion binding No
GO:0043229 intracellular organelle No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0060255 regulation of macromolecule metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No
GO:2001141 regulation of RNA biosynthetic process No
GO:0043167 ion binding No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0050789 regulation of biological process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0044464 cell part No
GO:0031323 regulation of cellular metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0003700 DNA-binding transcription factor activity No
GO:0046914 transition metal ion binding No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10938
MDGPSIVARGAASMSPTSPSSSRYGNGGAKRKRSSGIAPVESSPGSFLDDDHVDNADAGDHGDHDKKRQPGVKRA
CNECRQQKLRCDVVQDPFQSCSRCNRLKLECKIESNFKRVGKRSKHAEMEKEIERLRRNVARARAQGYVPDDDDD
VDSPVAPTATTFTHTRNPSLMGSDEAVSSLLHLKRGGSYNLQQHYSHELEAVRLTDNNVENLFNEFFAFYHPFLP
FLSPQQPPDTYKQQHPLLFWSIIAVAARRFSPADCPNLLTNLSGPMTRYLWTTIGEVPSNYHVVKAMCLLCAWPL
PTSTTTSDPTHILCGVMMKTATGIGLHRPNHIRDFSRVSVELNTEQLHDRVTTWAVCNIVAQNVGTGYGQPASTL
YDWTLALRPGDDPALHLSRELEARLQIERFCDKVSKEMYSNASDPRGVAGDEHRAMLMRVYRRDYGELQASIRSQ
QLGPIVLLHLRAAALHMRLAGFFDSSKTPGYMDDLMGLWRAATSFLDGILDADKVMSPNENAGSAFLVYSTNYLQ
QMLVAAAFTLLKLMRSFFCKTIDFDRGRSLFHHSIKAIRATSVVNNDLQWRLAELMVQMWNGARLENSRNHALNS
DDDSAIQVDDSLQLKVRCRHSMSLVFDSVWRWREEYQSQGRGSLENMRHPTNPDSTNESSASSSQLESTLVPSHL
STASNNLLGANGALTPGATGISATASGPNSMIGGGMGYGDANNDFFDPQHWMLDGLVDFNYSFVPPLEGA*
Coding >Hirsu2|10938
ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC
AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT
GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC
TGCAACGAATGCCGCCAGCAAAAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGCTGCTCCCGGTGTAAC
CGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAGCACGCCGAAATGGAA
AAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCCGACGACGACGACGAT
GTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTCATGGGCTCCGACGAG
GCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTACTCTCACGAGCTCGAG
GCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTACCACCCCTTCCTCCCC
TTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGGTCCATCATCGCCGTC
GCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCCATGACGCGCTACCTG
TGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTCTGCGCCTGGCCCCTG
CCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACTGCCACCGGCATCGGC
CTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAACAGCTGCACGACCGT
GTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAGCCTGCCTCCACCCTC
TACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAACTCGAGGCTAGGCTG
CAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCCCGTGGCGTCGCCGGC
GACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCCTCTATCCGCTCCCAG
CAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCCGGCTTCTTCGACTCG
AGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTCCTCGACGGCATCCTC
GACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCGACCAACTATCTGCAG
CAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAGACCATCGACTTCGAC
CGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAACAATGACCTGCAGTGG
CGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAACCACGCGCTCAACAGC
GACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCACAGCATGAGCCTCGTC
TTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAAAACATGAGACACCCG
ACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCCGTCACACCTG
TCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTCCGCCACGGCG
TCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGATCCCCAGCAT
TGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG
Transcript >Hirsu2|10938
ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC
AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT
GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC
TGCAACGAATGCCGCCAGCAAAAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGCTGCTCCCGGTGTAAC
CGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAGCACGCCGAAATGGAA
AAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCCGACGACGACGACGAT
GTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTCATGGGCTCCGACGAG
GCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTACTCTCACGAGCTCGAG
GCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTACCACCCCTTCCTCCCC
TTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGGTCCATCATCGCCGTC
GCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCCATGACGCGCTACCTG
TGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTCTGCGCCTGGCCCCTG
CCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACTGCCACCGGCATCGGC
CTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAACAGCTGCACGACCGT
GTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAGCCTGCCTCCACCCTC
TACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAACTCGAGGCTAGGCTG
CAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCCCGTGGCGTCGCCGGC
GACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCCTCTATCCGCTCCCAG
CAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCCGGCTTCTTCGACTCG
AGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTCCTCGACGGCATCCTC
GACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCGACCAACTATCTGCAG
CAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAGACCATCGACTTCGAC
CGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAACAATGACCTGCAGTGG
CGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAACCACGCGCTCAACAGC
GACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCACAGCATGAGCCTCGTC
TTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAAAACATGAGACACCCG
ACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCCGTCACACCTG
TCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTCCGCCACGGCG
TCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGATCCCCAGCAT
TGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG
Gene >Hirsu2|10938
ATGGACGGCCCGTCCATCGTCGCCCGCGGGGCCGCTTCCATGAGCCCTACTAGCCCCTCCAGCTCTCGCTATGGC
AATGGCGGCGCTAAGCGCAAGAGGAGCAGTGGCATCGCCCCTGTCGAGAGCAGCCCCGGAAGCTTCCTCGACGAT
GACCATGTAGACAATGCCGACGCCGGCGACCACGGCGACCACGACAAGAAGCGCCAGCCCGGCGTCAAGCGCGCC
TGCAACGAATGCCGCCAGCAAAAGGTGAGTGAGTCACGGCCACTGCCTGGCCGCCACAGCTCCTTCTCGTCGCCC
AACTGCCCGTCATCCCAAGCTGACCGCCTGGCACGGTAGCTTCGTTGCGATGTCGTCCAAGATCCTTTCCAGAGC
TGCTCCCGGTGTAACCGTCTCAAGCTCGAGTGCAAGATCGAGTCAAACTTCAAGCGCGTCGGGAAACGGTCCAAG
CACGCCGAAATGGAAAAGGAGATAGAGCGCCTACGCCGCAACGTCGCGCGCGCCCGAGCCCAGGGATATGTCCCC
GACGACGACGACGATGTCGATTCCCCCGTCGCCCCGACCGCCACCACCTTCACCCACACCCGCAACCCCTCCCTC
ATGGGCTCCGACGAGGCCGTCTCGTCTCTCCTCCACCTTAAGAGGGGCGGCTCCTACAACCTGCAGCAACACTAC
TCTCACGAGCTCGAGGCCGTGCGCCTGACGGACAACAACGTCGAAAACCTGTTCAACGAGTTCTTCGCCTTCTAC
CACCCCTTCCTCCCCTTCCTCAGCCCCCAGCAGCCCCCCGATACGTACAAGCAACAGCATCCCCTGCTGTTTTGG
TCCATCATCGCCGTCGCCGCTCGCCGCTTCAGCCCTGCCGACTGCCCGAACCTGCTCACCAACCTGTCGGGGCCC
ATGACGCGCTACCTGTGGACCACCATCGGCGAGGTCCCCAGCAACTACCACGTCGTCAAGGCCATGTGCCTCCTC
TGCGCCTGGCCCCTGCCCACGAGCACCACCACCTCGGACCCCACCCATATCCTTTGCGGCGTCATGATGAAGACT
GCCACCGGCATCGGCCTGCATCGCCCCAACCACATCCGAGACTTCTCCAGGGTCTCGGTCGAGCTGAATACCGAA
CAGCTGCACGACCGTGTCACCACGTGGGCAGTCTGCAACATCGTCGCCCAAAACGTCGGCACCGGCTACGGCCAG
CCTGCCTCCACCCTCTACGACTGGACCCTTGCCCTCCGCCCGGGCGACGACCCGGCCCTCCACTTGTCTCGGGAA
CTCGAGGCTAGGCTGCAGATTGAGCGATTTTGCGACAAGGTCTCAAAAGAAATGTACAGCAACGCTAGCGACCCC
CGTGGCGTCGCCGGCGACGAGCACCGCGCCATGCTCATGAGGGTGTACCGCAGGGACTATGGAGAGCTGCAGGCC
TCTATCCGCTCCCAGCAGCTCGGGCCCATCGTCCTCCTCCACCTGCGGGCCGCCGCCTTGCACATGCGCCTGGCC
GGCTTCTTCGACTCGAGCAAGACGCCTGGATACATGGACGACCTCATGGGGCTCTGGCGGGCCGCCACCAGCTTC
CTCGACGGCATCCTCGACGCCGACAAGGTCATGTCTCCCAACGAAAACGCCGGCAGCGCCTTTCTCGTCTACTCG
ACCAACTATCTGCAGCAGATGCTTGTGGCTGCCGCCTTTACCCTGCTCAAGCTTATGCGCTCCTTCTTCTGCAAG
ACCATCGACTTCGACCGCGGCCGAAGTCTCTTCCACCACTCCATCAAGGCCATACGCGCCACGAGCGTCGTCAAC
AATGACCTGCAGTGGCGGCTCGCCGAGCTCATGGTGCAGATGTGGAACGGCGCCCGCCTCGAGAACAGCCGGAAC
CACGCGCTCAACAGCGACGACGATTCGGCCATCCAGGTCGACGACAGCCTGCAGCTCAAGGTCCGCTGCCGCCAC
AGCATGAGCCTCGTCTTCGACTCCGTCTGGCGCTGGAGAGAGGAGTACCAGTCGCAGGGGAGGGGCTCTTTAGAA
AGTGAGTGTCGGCCCCCTTTCCATCTCCCACTCGGCAATGAGGCAACTCATGACCGCCATTGTCCCATCAGACAT
GAGACACCCGACCAACCCGGATTCGACCAACGAGTCCTCAGCGTCGTCCTCTCAGCTTGAAAGCACCCTGGTGCC
GTCACACCTGTCCACTGCCTCCAACAACCTGCTCGGCGCGAACGGCGCTCTGACGCCCGGCGCCACGGGCATCTC
CGCCACGGCGTCGGGACCCAACAGCATGATCGGAGGGGGCATGGGCTACGGCGACGCAAACAACGATTTCTTTGA
TCCCCAGCATTGGATGCTGGACGGCCTGGTCGATTTCAACTATTCGTTTGTTCCCCCTCTCGAGGGGGCCTAG

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