© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1090 |
| Gene name | |
| Location | Contig_1229:5600..6485 |
| Strand | - |
| Gene length (bp) | 885 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.4898 | 0.74 | 0.0528 | 0.0449 | 0.2975 | 0.0069 | 0.0602 | 0.0683 | 0.0487 | 0.0354 |
| Orthofinder run ID | 4 |
| Orthogroup | 4847 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1090 MMHRQHHQQQQQQQQQQQQQQQQQQQPPSQQQPSPQPSQQPQQPHQLQQQEQEQQLPQPHHHHHHHHHHQQQHHH FQHQHQHQHHHPQQAPQQPPHQLHHQAAEQQTQPLHHLQHLHSHHHCHNHHHQQQQQQQQTPHHRQHPPCRQPTT PGPVNLHQLALRNPPLAHKLHQMALPLSPLVQLTTGAVHPHFPRTVLHFWLLTDAQLESLASFYHQRTPSPWSAQ YPCPVAWRSDLPLEEKRRRMGRFIGLRGCDSPPDVAAVVGALRSEDDIADEARLAAADDEMWRRKLNPW* |
| Coding | >Hirsu2|1090 ATGATGCACCGCCAACACCACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCCGCCGTCACAGCAGCAGCCGTCGCCGCAGCCGTCACAGCAGCCGCAACAGCCGCATCAGCTCCAGCAACAG GAGCAGGAACAACAACTGCCGCAGCCGCACCACCACCACCACCACCACCACCACCACCAGCAACAGCACCACCAC TTCCAGCACCAGCACCAGCACCAGCACCACCACCCTCAACAGGCACCGCAACAACCGCCGCACCAATTGCACCAC CAAGCTGCTGAGCAACAAACACAGCCGTTGCACCACCTCCAGCACCTCCACTCCCACCACCACTGCCACAACCAC CACCACCAACAGCAGCAGCAACAACAACAAACCCCCCATCACCGGCAGCACCCGCCATGCCGCCAGCCGACGACC CCTGGCCCCGTCAACCTCCACCAGCTCGCCCTCCGCAACCCGCCGCTGGCCCATAAGCTGCACCAGATGGCCCTC CCGCTCTCCCCCCTCGTCCAGCTCACCACCGGCGCCGTCCACCCGCACTTCCCCCGCACCGTCCTCCACTTCTGG CTCCTGACCGACGCCCAGCTCGAGAGCCTCGCCTCCTTCTACCACCAGCGCACCCCCAGCCCCTGGTCCGCCCAG TACCCCTGCCCCGTCGCCTGGCGCTCCGACCTGCCGCTCGAGGAGAAGCGCCGCCGCATGGGCAGGTTCATCGGC CTCCGCGGCTGCGACTCGCCCCCGGACGTGGCCGCCGTCGTCGGTGCCCTCCGCTCCGAGGACGACATCGCCGAC GAGGCCAGGCTGGCCGCCGCCGACGACGAGATGTGGCGGAGGAAGCTGAATCCCTGGTGA |
| Transcript | >Hirsu2|1090 ATGATGCACCGCCAACACCACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCCGCCGTCACAGCAGCAGCCGTCGCCGCAGCCGTCACAGCAGCCGCAACAGCCGCATCAGCTCCAGCAACAG GAGCAGGAACAACAACTGCCGCAGCCGCACCACCACCACCACCACCACCACCACCACCAGCAACAGCACCACCAC TTCCAGCACCAGCACCAGCACCAGCACCACCACCCTCAACAGGCACCGCAACAACCGCCGCACCAATTGCACCAC CAAGCTGCTGAGCAACAAACACAGCCGTTGCACCACCTCCAGCACCTCCACTCCCACCACCACTGCCACAACCAC CACCACCAACAGCAGCAGCAACAACAACAAACCCCCCATCACCGGCAGCACCCGCCATGCCGCCAGCCGACGACC CCTGGCCCCGTCAACCTCCACCAGCTCGCCCTCCGCAACCCGCCGCTGGCCCATAAGCTGCACCAGATGGCCCTC CCGCTCTCCCCCCTCGTCCAGCTCACCACCGGCGCCGTCCACCCGCACTTCCCCCGCACCGTCCTCCACTTCTGG CTCCTGACCGACGCCCAGCTCGAGAGCCTCGCCTCCTTCTACCACCAGCGCACCCCCAGCCCCTGGTCCGCCCAG TACCCCTGCCCCGTCGCCTGGCGCTCCGACCTGCCGCTCGAGGAGAAGCGCCGCCGCATGGGCAGGTTCATCGGC CTCCGCGGCTGCGACTCGCCCCCGGACGTGGCCGCCGTCGTCGGTGCCCTCCGCTCCGAGGACGACATCGCCGAC GAGGCCAGGCTGGCCGCCGCCGACGACGAGATGTGGCGGAGGAAGCTGAATCCCTGGTGA |
| Gene | >Hirsu2|1090 ATGATGCACCGCCAACACCACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCCGCCGTCACAGCAGCAGCCGTCGCCGCAGCCGTCACAGCAGCCGCAACAGCCGCATCAGCTCCAGCAACAG GAGCAGGAACAACAACTGCCGCAGCCGCACCACCACCACCACCACCACCACCACCACCAGCAACAGCACCACCAC TTCCAGCACCAGCACCAGCACCAGCACCACCACCCTCAACAGGCACCGCAACAACCGCCGCACCAATTGCACCAC CAAGCTGCTGAGCAACAAACACAGCCGTTGCACCACCTCCAGCACCTCCACTCCCACCACCACTGCCACAACCAC CACCACCAACAGCAGCAGCAACAACAACAAACCCCCCATCACCGGCAGCACCCGCCATGCCGCCAGCCGACGACC CCTGGCCCCGTCAACCTCCACCAGCTCGCCCTCCGCAACCCGCCGCTGGCCCATAAGCTGCACCAGATGGCCCTC CCGCTCTCCCCCCTCGTCCAGCTCACCACCGGCGCCGTCCACCCGCACTTCCCCCGCACCGTCCTCCACTTCTGG CTCCTGACCGACGCCCAGCTCGAGAGCCTCGCCTCCTTCTACCACCAGCGCACCCCCAGCCCCTGGTCCGCCCAG TACCCCTGCCCCGTCGCCTGGCGCTCCGACCTGCCGCTCGAGGAGAAGCGCCGCCGCATGGGCAGGTTCATCGGC CTCCGCGGCTGCGACTCGCCCCCGGACGTGGCCGCCGTCGTCGGTGCCCTCCGCTCCGAGGACGACATCGCCGAC GAGGCCAGGCTGGCCGCCGCCGACGACGAGATGTGGCGGAGGAAGCTGAATCCCTGGTGA |