Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10885
Gene name
LocationContig_92:35754..36654
Strand+
Gene length (bp)900
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18142 SLATT_fungal SMODS and SLOG-associating 2TM effector domain 4.1E-27 112 222

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 119 141 22
2 151 173 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10885
MNKYSKPLDLPILPPVPVTRNSGDDARKGKRVEQGSKQPSDTLDQHFQAHGHHRVARHRFLTPAEWSKIANGVGG
VRDAESHKPARPSSWWWPPRGMPEGLYRDVVTCRIKFYCVFHAISILRWVLMISQLLVGAAVTSLGSMSMRVGTP
ITILGAINTVIAGILALMHNSGLPDRYRYDMGQFEEIEDHIKELLDSAIAPADLTTDQILAECFDLFREAKATVA
ANMPVNYNSRQVLQGRNTQNVVMLPSAPPPPPLSPPPPGPATATVVTSKANAALSEVNQQQPAPEGSGGTSDKL*
Coding >Hirsu2|10885
ATGAACAAATACTCCAAGCCGCTCGACCTCCCCATCCTGCCTCCTGTCCCCGTGACTCGCAATTCCGGGGACGAC
GCGAGGAAAGGAAAACGGGTTGAACAGGGGTCCAAGCAGCCGAGTGACACCTTAGACCAGCATTTCCAGGCACAC
GGGCATCACCGAGTGGCTCGCCACAGATTCCTGACGCCCGCAGAGTGGTCCAAGATTGCCAACGGGGTCGGCGGC
GTTCGCGATGCCGAGAGTCACAAGCCGGCCCGTCCCTCGAGCTGGTGGTGGCCGCCTCGGGGCATGCCGGAGGGC
CTCTACCGCGACGTTGTGACGTGCAGGATCAAGTTCTACTGCGTCTTTCACGCCATAAGCATCCTTCGCTGGGTG
CTCATGATCTCCCAGCTGCTGGTCGGTGCGGCCGTCACGTCGCTCGGGTCTATGTCGATGCGAGTCGGGACGCCC
ATCACGATCCTGGGGGCCATCAACACGGTAATAGCTGGCATCCTGGCCCTTATGCACAACAGTGGATTGCCTGAT
CGCTATCGGTATGACATGGGCCAGTTCGAGGAAATCGAGGACCACATCAAGGAGCTTCTCGACTCTGCCATTGCC
CCGGCCGACCTGACAACCGACCAGATCCTCGCCGAGTGCTTCGATTTGTTCCGCGAGGCCAAGGCCACCGTCGCC
GCCAACATGCCGGTCAACTACAATTCTCGACAGGTTCTGCAAGGTAGAAACACGCAGAACGTAGTCATGTTGCCC
TCTGCGCCACCACCGCCGCCGCTGTCGCCGCCGCCGCCAGGCCCGGCCACGGCAACAGTGGTGACGTCCAAGGCG
AATGCTGCCCTGAGCGAGGTCAATCAGCAACAGCCAGCTCCTGAAGGTAGCGGTGGCACGAGTGATAAATTATGA
Transcript >Hirsu2|10885
ATGAACAAATACTCCAAGCCGCTCGACCTCCCCATCCTGCCTCCTGTCCCCGTGACTCGCAATTCCGGGGACGAC
GCGAGGAAAGGAAAACGGGTTGAACAGGGGTCCAAGCAGCCGAGTGACACCTTAGACCAGCATTTCCAGGCACAC
GGGCATCACCGAGTGGCTCGCCACAGATTCCTGACGCCCGCAGAGTGGTCCAAGATTGCCAACGGGGTCGGCGGC
GTTCGCGATGCCGAGAGTCACAAGCCGGCCCGTCCCTCGAGCTGGTGGTGGCCGCCTCGGGGCATGCCGGAGGGC
CTCTACCGCGACGTTGTGACGTGCAGGATCAAGTTCTACTGCGTCTTTCACGCCATAAGCATCCTTCGCTGGGTG
CTCATGATCTCCCAGCTGCTGGTCGGTGCGGCCGTCACGTCGCTCGGGTCTATGTCGATGCGAGTCGGGACGCCC
ATCACGATCCTGGGGGCCATCAACACGGTAATAGCTGGCATCCTGGCCCTTATGCACAACAGTGGATTGCCTGAT
CGCTATCGGTATGACATGGGCCAGTTCGAGGAAATCGAGGACCACATCAAGGAGCTTCTCGACTCTGCCATTGCC
CCGGCCGACCTGACAACCGACCAGATCCTCGCCGAGTGCTTCGATTTGTTCCGCGAGGCCAAGGCCACCGTCGCC
GCCAACATGCCGGTCAACTACAATTCTCGACAGGTTCTGCAAGGTAGAAACACGCAGAACGTAGTCATGTTGCCC
TCTGCGCCACCACCGCCGCCGCTGTCGCCGCCGCCGCCAGGCCCGGCCACGGCAACAGTGGTGACGTCCAAGGCG
AATGCTGCCCTGAGCGAGGTCAATCAGCAACAGCCAGCTCCTGAAGGTAGCGGTGGCACGAGTGATAAATTATGA
Gene >Hirsu2|10885
ATGAACAAATACTCCAAGCCGCTCGACCTCCCCATCCTGCCTCCTGTCCCCGTGACTCGCAATTCCGGGGACGAC
GCGAGGAAAGGAAAACGGGTTGAACAGGGGTCCAAGCAGCCGAGTGACACCTTAGACCAGCATTTCCAGGCACAC
GGGCATCACCGAGTGGCTCGCCACAGATTCCTGACGCCCGCAGAGTGGTCCAAGATTGCCAACGGGGTCGGCGGC
GTTCGCGATGCCGAGAGTCACAAGCCGGCCCGTCCCTCGAGCTGGTGGTGGCCGCCTCGGGGCATGCCGGAGGGC
CTCTACCGCGACGTTGTGACGTGCAGGATCAAGTTCTACTGCGTCTTTCACGCCATAAGCATCCTTCGCTGGGTG
CTCATGATCTCCCAGCTGCTGGTCGGTGCGGCCGTCACGTCGCTCGGGTCTATGTCGATGCGAGTCGGGACGCCC
ATCACGATCCTGGGGGCCATCAACACGGTAATAGCTGGCATCCTGGCCCTTATGCACAACAGTGGATTGCCTGAT
CGCTATCGGTATGACATGGGCCAGTTCGAGGAAATCGAGGACCACATCAAGGAGCTTCTCGACTCTGCCATTGCC
CCGGCCGACCTGACAACCGACCAGATCCTCGCCGAGTGCTTCGATTTGTTCCGCGAGGCCAAGGCCACCGTCGCC
GCCAACATGCCGGTCAACTACAATTCTCGACAGGTTCTGCAAGGTAGAAACACGCAGAACGTAGTCATGTTGCCC
TCTGCGCCACCACCGCCGCCGCTGTCGCCGCCGCCGCCAGGCCCGGCCACGGCAACAGTGGTGACGTCCAAGGCG
AATGCTGCCCTGAGCGAGGTCAATCAGCAACAGCCAGCTCCTGAAGGTAGCGGTGGCACGAGTGATAAATTATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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