Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1086
Gene name
Location	Contig_1228:3241..4476
Strand	-
Gene length (bp)	1235
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11754	Velvet	Velvet factor	4.3E-09	64	126
PF11754	Velvet	Velvet factor	5.4E-34	126	242

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1086 MASNAGSYLDLPFLQPGRHSSSLQYLGGGGGGGGGGGGGGGELSLASDDTASQQAESYGDPQRQLTLRQAPMHAR VAIGKEKDRKPIDPPPIVQLLDKRHNGKSGLYDSPYLFMTSSLVPENYGESSPSSSSGSSKEQELPSNYLVGSLV SSIHRLRDTDNVEGGFFVFGDLSVKREGRFRLRFTLYERDQHSSAPSFYFVSELVTNVFTVFSTKLFPGMADSTQ LTRTFSNQGVKVRLRKDSSGMAARKRNRGVTDVADDFLDRQTKRASYDRELPLNNYGVSELMDPLHGVVSSAPPN SFLVAADAMSSSSSTSSRNAGLGIPLSTSGYYFTGAHYY*
Coding	>Hirsu2\|1086 ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA GTGGCCATAGGAAAGGAGAAGGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACAC AATGGGAAGAGCGGCCTCTACGACAGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAG TCGTCGCCGTCCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTC TCGTCGATCCACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAG CGCGAGGGCCGGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTC GTCTCGGAGCTGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAG TTGACGCGCACCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAG CGCAACCGGGGCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAA CTCCCGCTCAACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAAC AGCTTCCTCGTGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCG CTGTCGACGAGCGGATACTACTTCACCGGCGCGCACTATTACTAG
Transcript	>Hirsu2\|1086 ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA GTGGCCATAGGAAAGGAGAAGGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACAC AATGGGAAGAGCGGCCTCTACGACAGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAG TCGTCGCCGTCCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTC TCGTCGATCCACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAG CGCGAGGGCCGGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTC GTCTCGGAGCTGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAG TTGACGCGCACCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAG CGCAACCGGGGCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAA CTCCCGCTCAACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAAC AGCTTCCTCGTGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCG CTGTCGACGAGCGGATACTACTTCACCGGCGCGCACTATTACTAG
Gene	>Hirsu2\|1086 ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA GTGGCCATAGGAAAGGAGAAGGGTGCGTGCCCCGACTTTTGAGGGGGGGGGGGCAGTTTTCGTGGTTCGGAGAGG CTAACGCGGCGCATCTAGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACACAATG GGAAGAGCGGCCTCTACGACAGTCAGTATCCCCTGCTCTCCCTCCCTCCCCTCCCTCACCCCCTCTCCCATCCAC GCATCACCCCGTCTCTCTCTTGCCGCTCTGCTCTCTCCCCTCTCGCGACGCGGTGCCGAATGCGATTCTCACCCG CCCGTTCTCGCGCAGGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAGTCGTCGCCGT CCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTCTCGTCGATCC ACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAGCGCGAGGGCC GGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTCGTCTCGGAGC TGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAGTTGACGCGCA CCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAGCGCAACCGGG GCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAACTCCCGCTCA ACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAACAGCTTCCTCG TGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCGCTGTCGACGA GCGGATACTACTTCACCGGCGCGCACTATTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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