Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1086
Gene name
LocationContig_1228:3241..4476
Strand-
Gene length (bp)1235
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11754 Velvet Velvet factor 4.3E-09 64 126
PF11754 Velvet Velvet factor 5.4E-34 126 242

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2635 0.9387 0.0224 0.0269 0.0605 0.001 0.0731 0.1422 0.0119 0.0016

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1392
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1905
Ophiocordyceps australis map64 (Brazil) OphauB2|2644
Ophiocordyceps camponoti-floridani Ophcf2|01364
Ophiocordyceps camponoti-rufipedis Ophun1|2578
Ophiocordyceps kimflemingae Ophio5|5613
Ophiocordyceps subramaniannii Hirsu2|1086 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1086
MASNAGSYLDLPFLQPGRHSSSLQYLGGGGGGGGGGGGGGGELSLASDDTASQQAESYGDPQRQLTLRQAPMHAR
VAIGKEKDRKPIDPPPIVQLLDKRHNGKSGLYDSPYLFMTSSLVPENYGESSPSSSSGSSKEQELPSNYLVGSLV
SSIHRLRDTDNVEGGFFVFGDLSVKREGRFRLRFTLYERDQHSSAPSFYFVSELVTNVFTVFSTKLFPGMADSTQ
LTRTFSNQGVKVRLRKDSSGMAARKRNRGVTDVADDFLDRQTKRASYDRELPLNNYGVSELMDPLHGVVSSAPPN
SFLVAADAMSSSSSTSSRNAGLGIPLSTSGYYFTGAHYY*
Coding >Hirsu2|1086
ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC
CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC
GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA
GTGGCCATAGGAAAGGAGAAGGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACAC
AATGGGAAGAGCGGCCTCTACGACAGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAG
TCGTCGCCGTCCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTC
TCGTCGATCCACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAG
CGCGAGGGCCGGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTC
GTCTCGGAGCTGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAG
TTGACGCGCACCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAG
CGCAACCGGGGCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAA
CTCCCGCTCAACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAAC
AGCTTCCTCGTGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCG
CTGTCGACGAGCGGATACTACTTCACCGGCGCGCACTATTACTAG
Transcript >Hirsu2|1086
ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC
CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC
GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA
GTGGCCATAGGAAAGGAGAAGGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACAC
AATGGGAAGAGCGGCCTCTACGACAGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAG
TCGTCGCCGTCCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTC
TCGTCGATCCACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAG
CGCGAGGGCCGGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTC
GTCTCGGAGCTGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAG
TTGACGCGCACCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAG
CGCAACCGGGGCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAA
CTCCCGCTCAACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAAC
AGCTTCCTCGTGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCG
CTGTCGACGAGCGGATACTACTTCACCGGCGCGCACTATTACTAG
Gene >Hirsu2|1086
ATGGCCAGCAACGCCGGCAGCTACCTAGACCTGCCCTTCCTGCAGCCCGGCCGCCACTCGTCCAGCCTGCAGTAC
CTGGGCGGTGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGTCTCTGGCGAGCGACGACACC
GCCTCGCAGCAGGCCGAGTCGTACGGCGATCCCCAGCGGCAGCTGACGCTCAGGCAAGCGCCAATGCACGCACGA
GTGGCCATAGGAAAGGAGAAGGGTGCGTGCCCCGACTTTTGAGGGGGGGGGGGCAGTTTTCGTGGTTCGGAGAGG
CTAACGCGGCGCATCTAGACCGCAAACCGATCGATCCTCCGCCCATCGTCCAGCTGCTCGACAAGCGACACAATG
GGAAGAGCGGCCTCTACGACAGTCAGTATCCCCTGCTCTCCCTCCCTCCCCTCCCTCACCCCCTCTCCCATCCAC
GCATCACCCCGTCTCTCTCTTGCCGCTCTGCTCTCTCCCCTCTCGCGACGCGGTGCCGAATGCGATTCTCACCCG
CCCGTTCTCGCGCAGGCCCCTATCTGTTCATGACGTCGTCGCTGGTACCGGAAAACTACGGCGAGTCGTCGCCGT
CCAGCAGCAGCGGCAGCAGCAAAGAGCAGGAGCTCCCGTCCAACTACCTCGTCGGCTCGCTCGTCTCGTCGATCC
ACCGGCTGAGGGACACGGACAACGTCGAGGGCGGCTTCTTCGTCTTCGGCGACCTGTCGGTGAAGCGCGAGGGCC
GGTTCCGGCTCCGGTTCACGCTGTACGAGCGCGACCAGCACAGCTCGGCGCCCAGCTTCTACTTCGTCTCGGAGC
TGGTGACCAACGTCTTCACCGTCTTCTCCACCAAGCTCTTCCCCGGCATGGCCGACTCGACGCAGTTGACGCGCA
CCTTCAGCAACCAGGGCGTCAAGGTCCGGCTCCGCAAGGACTCGAGCGGCATGGCGGCCAGGAAGCGCAACCGGG
GCGTCACCGACGTGGCCGACGACTTCCTCGACCGACAGACGAAGCGGGCCTCGTACGACCGGGAACTCCCGCTCA
ACAACTACGGCGTCTCCGAACTGATGGACCCCCTTCACGGCGTCGTCAGCTCGGCCCCGCCCAACAGCTTCCTCG
TGGCCGCCGACGCCATGTCATCGTCCTCGTCGACGTCATCGAGGAACGCCGGCCTCGGGATACCGCTGTCGACGA
GCGGATACTACTTCACCGGCGCGCACTATTACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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