© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10854 |
| Gene name | |
| Location | Contig_914:6732..8808 |
| Strand | - |
| Gene length (bp) | 2076 |
| Transcript length (bp) | 1752 |
| Coding sequence length (bp) | 1752 |
| Protein length (aa) | 584 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3896 | 0.7232 | 0.4393 | 0.0827 | 0.161 | 0.099 | 0.0669 | 0.052 | 0.064 | 0.0097 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 46 | 0.651698 |
| Orthofinder run ID | 4 |
| Orthogroup | 8609 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10854 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10854 MRNALRIAWWVAHSCGPPHGTAFRLHSLALLVATPLLCAPAADVRACRFPGQVKVLTIQKSPRIAAFHRWQHSHR HTAAKRRNVEDQMDDDDEEYVPAHKRHKAAAPTRRQRDPAVNCWQPPRTRPRRARRQKSSSNIVSSTISYATRLA SYEEWPLSDAVLKCARDNGTATFQLQFTWAASCMAHATQHEPRKIPKVDGRALTIQGKRSGVFMEGSSEDPSRQV TDVYQMDCLLARWRHIFFLRWSDGTTGWEPKRNILDRQMLEEFEAGYQGFDEGVDVLRSRSKAGKTIYPPSLIAC FLGIRGLGWGAPRISGSVRGGQWHLRVSIPPTGGARRGYPPDITYRSPISLQRPVPRVLAAAWAAPIRALAAARR RAPTWTGWSFVGHSALPRHEPRQAMARTPNRRKAKAKAAPKAKRAGAAAEAAAGSGPGPGSGLSSSLRAAQRIRQ SATNDAELRANAQTILSVIHESRPKTTTSAYAPKQEEFEQFCWRKQYCDGATVTEEKLLLFLVKEVAGRPLKVRS RKAASDTRQDETRLAWRSVRTYVTAITDLYRTQRALGMNTHPSPREDNVREYLKSSLR* |
| Coding | >Hirsu2|10854 ATGCGTAACGCACTACGCATCGCGTGGTGGGTTGCGCACTCGTGCGGACCACCACACGGCACCGCATTTCGGCTT CATAGCCTGGCACTGCTTGTGGCCACGCCCTTGCTGTGCGCACCTGCCGCAGACGTTCGTGCATGCCGATTCCCC GGCCAGGTCAAAGTATTGACCATCCAGAAGTCTCCTCGCATTGCTGCCTTTCACCGCTGGCAACACAGTCATCGT CATACCGCAGCGAAAAGAAGGAACGTGGAAGACCAGATGGATGACGATGACGAGGAGTACGTCCCAGCACACAAG CGTCACAAGGCTGCGGCTCCGACTCGTAGGCAGCGCGATCCGGCTGTGAACTGCTGGCAGCCCCCAAGAACCCGA CCACGCCGTGCCCGGAGGCAGAAGAGCAGCAGCAACATCGTCTCGTCTACAATTAGTTACGCAACCAGACTAGCA AGCTACGAAGAATGGCCCCTTTCCGATGCGGTGCTTAAGTGCGCCCGAGACAACGGCACGGCAACGTTTCAGCTA CAGTTCACGTGGGCCGCCTCGTGTATGGCACACGCTACCCAACACGAACCCAGAAAAATCCCGAAGGTCGATGGT CGCGCACTTACGATCCAAGGTAAGAGATCTGGTGTGTTCATGGAAGGCAGCTCGGAAGATCCGAGTCGGCAAGTT ACCGACGTCTACCAGATGGATTGCTTACTGGCTCGGTGGAGGCACATATTCTTCCTCAGATGGTCTGATGGTACC ACAGGATGGGAGCCAAAGAGGAATATTCTAGACAGGCAGATGCTTGAGGAATTTGAGGCAGGGTATCAGGGTTTC GATGAGGGAGTTGACGTTCTTCGTTCGCGAAGCAAAGCCGGAAAAACAATTTATCCACCATCCCTTATCGCCTGC TTCCTTGGTATCCGAGGGCTCGGGTGGGGCGCGCCGAGAATCAGCGGCAGCGTCCGGGGTGGCCAATGGCATCTG CGGGTATCCATCCCCCCCACCGGAGGGGCGCGCCGTGGATATCCACCAGATATCACTTACCGCTCGCCGATTTCG CTACAGCGCCCTGTCCCGCGCGTTTTAGCGGCAGCCTGGGCGGCGCCCATCCGCGCTCTCGCCGCCGCACGCCGC CGCGCTCCGACCTGGACGGGGTGGTCGTTCGTAGGGCATTCGGCTCTCCCCCGCCACGAACCACGACAGGCCATG GCCCGGACGCCAAATCGACGGAAGGCGAAGGCTAAAGCGGCGCCGAAGGCGAAGCGCGCAGGGGCAGCAGCAGAG GCAGCAGCAGGGTCAGGGCCAGGGCCAGGATCAGGGCTGTCGTCGAGCCTACGAGCAGCCCAACGTATCCGGCAG AGCGCGACGAACGACGCGGAGCTACGCGCCAATGCACAGACGATCCTCTCAGTGATCCACGAGTCTCGACCGAAG ACTACGACCTCGGCGTACGCGCCGAAGCAAGAGGAATTCGAGCAGTTCTGCTGGCGCAAACAGTACTGCGACGGC GCTACGGTTACGGAGGAGAAGCTCCTCCTCTTCCTCGTCAAGGAGGTAGCAGGCCGGCCCTTGAAGGTCAGAAGC CGCAAGGCCGCCTCCGATACTCGGCAGGACGAGACTCGGCTGGCCTGGCGGTCGGTCCGAACTTATGTCACCGCA ATCACGGACCTTTACCGGACGCAGAGGGCCCTCGGAATGAACACGCACCCGTCGCCTCGCGAGGACAACGTACGA GAGTACCTCAAGTCCTCTCTTCGCTGA |
| Transcript | >Hirsu2|10854 ATGCGTAACGCACTACGCATCGCGTGGTGGGTTGCGCACTCGTGCGGACCACCACACGGCACCGCATTTCGGCTT CATAGCCTGGCACTGCTTGTGGCCACGCCCTTGCTGTGCGCACCTGCCGCAGACGTTCGTGCATGCCGATTCCCC GGCCAGGTCAAAGTATTGACCATCCAGAAGTCTCCTCGCATTGCTGCCTTTCACCGCTGGCAACACAGTCATCGT CATACCGCAGCGAAAAGAAGGAACGTGGAAGACCAGATGGATGACGATGACGAGGAGTACGTCCCAGCACACAAG CGTCACAAGGCTGCGGCTCCGACTCGTAGGCAGCGCGATCCGGCTGTGAACTGCTGGCAGCCCCCAAGAACCCGA CCACGCCGTGCCCGGAGGCAGAAGAGCAGCAGCAACATCGTCTCGTCTACAATTAGTTACGCAACCAGACTAGCA AGCTACGAAGAATGGCCCCTTTCCGATGCGGTGCTTAAGTGCGCCCGAGACAACGGCACGGCAACGTTTCAGCTA CAGTTCACGTGGGCCGCCTCGTGTATGGCACACGCTACCCAACACGAACCCAGAAAAATCCCGAAGGTCGATGGT CGCGCACTTACGATCCAAGGTAAGAGATCTGGTGTGTTCATGGAAGGCAGCTCGGAAGATCCGAGTCGGCAAGTT ACCGACGTCTACCAGATGGATTGCTTACTGGCTCGGTGGAGGCACATATTCTTCCTCAGATGGTCTGATGGTACC ACAGGATGGGAGCCAAAGAGGAATATTCTAGACAGGCAGATGCTTGAGGAATTTGAGGCAGGGTATCAGGGTTTC GATGAGGGAGTTGACGTTCTTCGTTCGCGAAGCAAAGCCGGAAAAACAATTTATCCACCATCCCTTATCGCCTGC TTCCTTGGTATCCGAGGGCTCGGGTGGGGCGCGCCGAGAATCAGCGGCAGCGTCCGGGGTGGCCAATGGCATCTG CGGGTATCCATCCCCCCCACCGGAGGGGCGCGCCGTGGATATCCACCAGATATCACTTACCGCTCGCCGATTTCG CTACAGCGCCCTGTCCCGCGCGTTTTAGCGGCAGCCTGGGCGGCGCCCATCCGCGCTCTCGCCGCCGCACGCCGC CGCGCTCCGACCTGGACGGGGTGGTCGTTCGTAGGGCATTCGGCTCTCCCCCGCCACGAACCACGACAGGCCATG GCCCGGACGCCAAATCGACGGAAGGCGAAGGCTAAAGCGGCGCCGAAGGCGAAGCGCGCAGGGGCAGCAGCAGAG GCAGCAGCAGGGTCAGGGCCAGGGCCAGGATCAGGGCTGTCGTCGAGCCTACGAGCAGCCCAACGTATCCGGCAG AGCGCGACGAACGACGCGGAGCTACGCGCCAATGCACAGACGATCCTCTCAGTGATCCACGAGTCTCGACCGAAG ACTACGACCTCGGCGTACGCGCCGAAGCAAGAGGAATTCGAGCAGTTCTGCTGGCGCAAACAGTACTGCGACGGC GCTACGGTTACGGAGGAGAAGCTCCTCCTCTTCCTCGTCAAGGAGGTAGCAGGCCGGCCCTTGAAGGTCAGAAGC CGCAAGGCCGCCTCCGATACTCGGCAGGACGAGACTCGGCTGGCCTGGCGGTCGGTCCGAACTTATGTCACCGCA ATCACGGACCTTTACCGGACGCAGAGGGCCCTCGGAATGAACACGCACCCGTCGCCTCGCGAGGACAACGTACGA GAGTACCTCAAGTCCTCTCTTCGCTGA |
| Gene | >Hirsu2|10854 ATGCGTAACGCACTACGCATCGCGTGGTGGGTTGCGCACTCGTGCGGACCACCACACGGCACCGCATTTCGGCTT CATAGCCTGGCACTGCTTGTGGCCACGCCCTTGCTGTGCGCACCTGCCGCAGGTTTGTGGCTTCTTGCACGAGAA GGCCTTGTGGCCCATCCCTTGAAAGTTGAAGCACTGTACTGATCCCTTGCGTGGCTCGAAGACGTTCGTGCATGC CGATTCCCCGGCCAGGTCAAAGTATTGACCATCCAGAAGTCTCCTCGCATTGCTGCCTTTCGTGACATAGACCAC CATCGACCCGTGCGCCTTATCTAGGTGGAGGCGATTGCATATGTCCCAGACCGCTGGCAACACAGTCATCGTCAT ACCGCAGCGAAAAGAAGGAACGTGGAAGACCAGATGGATGACGATGACGAGGAGTACGTCCCAGCACACAAGCGT CACAAGGCTGCGGCTCCGACTCGTAGGCAGCGCGATCCGGCTGTGAACTGCTGGCAGCCCCCAAGAACCCGACCA CGCCGTGCCCGGAGGCAGAAGAGCAGCAGCAACATCGTCTCGTCTACAATTAGTTACGCAACCAGACTAGCAAGC TACGAAGAATGGCCCCTTTCCGATGCGGTGCTTAAGTGCGCCCGAGACAACGGCACGGCAACGTTTCAGCTACAG TTCACGTGGGCCGCCTCGTGTATGGCACACGCTACCCAACACGAACCCAGAAAAATCCCGAAGGTCGATGGTCGC GCACTTACGATCCAAGGTAAGAGATCTGGTGTGTTCATGGAAGGCAGCTCGGAAGATCCGAGTCGGCAAGTTACC GACGTCTACCAGATGGATTGCTTACTGGCTCGGTGGAGGCACATATTCTTCCTCAGATGGTCTGATGGTACCACA GGATGGGAGCCAAAGAGGAATATTCTAGACAGGCAGATGCTTGAGGAATTTGAGGCAGGGTATCAGGGTTTCGAT GAGGGAGTTGACGTTCTTCGTTCGCGAAGCAAAGCCGGAAAAAGTCAATATCCCCTGCATTGGCATGGTCGTCCG TCGTGTGAGGACTCATGGGCGGACGAGAAACTGATGAGCTCGAAGCGAATGGAGAGGATCAGGGCATGCGCGTTG GGCGGTGTTACCTGAAAGTTAGGGTTGCCATGCAGCGGCACTAAGGGCTAGCCAATATTGAGGGCGACAGCAATT TATCCACCATCCCTTATCGCCTGCTTCCTTGGTATCCGAGGGCTCGGGTGGGGCGCGCCGAGAATCAGCGGCAGC GTCCGGGGTGGCCAATGGCATCTGCGGGTATCCATCCCCCCCACCGGAGGGGCGCGCCGTGGATATCCACCAGAT ATCACTTACCGCTCGCCGATTTCGCTACAGCGCCCTGTCCCGCGCGTTTTAGCGGCAGCCTGGGCGGCGCCCATC CGCGCTCTCGCCGCCGCACGCCGCCGCGCTCCGACCTGGACGGGGTGGTCGTTCGTAGGGCATTCGGCTCTCCCC CGCCACGAACCACGACAGGCCATGGCCCGGACGCCAAATCGACGGAAGGCGAAGGCTAAAGCGGCGCCGAAGGCG AAGCGCGCAGGGGCAGCAGCAGAGGCAGCAGCAGGGTCAGGGCCAGGGCCAGGATCAGGGCTGTCGTCGAGCCTA CGAGCAGCCCAACGTATCCGGCAGAGCGCGACGAACGACGCGGAGCTACGCGCCAATGCACAGACGATCCTCTCA GTGATCCACGAGTCTCGACCGAAGACTACGACCTCGGCGTACGCGCCGAAGCAAGAGGAATTCGAGCAGTTCTGC TGGCGCAAACAGTACTGCGACGGCGCTACGGTTACGGAGGAGAAGCTCCTCCTCTTCCTCGTCAAGGAGGTAGCA GGCCGGCCCTTGAAGGTCAGAAGCCGCAAGGCCGCCTCCGATACTCGGCAGGACGAGACTCGGCTGGCCTGGCGG TCGGTCCGAACTTATGTCACCGCAATCACGGACCTTTACCGGACGCAGAGGGCCCTCGGAATGAACACGCACCCG TCGCCTCGCGAGGACAACGTACGAGAGTACCTCAAGTCCTCTCTTCGCTGA |