Protein ID | Hirsu2|10843 |
Gene name | |
Location | Contig_912:1585..2963 |
Strand | - |
Gene length (bp) | 1378 |
Transcript length (bp) | 1104 |
Coding sequence length (bp) | 1104 |
Protein length (aa) | 368 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1951 | 0.1205 | 0.6722 | 0.1831 | 0.1508 | 0.0302 | 0.6136 | 0.3592 | 0.6071 | 0.0107 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999453 |
Orthofinder run ID | 4 |
Orthogroup | 1388 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10843 MSCPQRTLCFLRDIICFLCLFVSIAQALSWGIANGPNRAAPTKPQPVHHDSSRPIGSKHRSSSIYELALSELQEL ESEPLCHRIAARLLVNNCQLLDGHDEASVLTDSGRATRDFVDFFAASLAICDLERASFLIPPPCSKFRESVLAKI PVPSKPHLHVSPSEIDSCLQGLARSDSAWNTWVSYRHKALRFCDAARVENEKDKNIHLFQRITKVLDRLTSQAES DLEARFEALNQVFRDTSANLEGIKPRLSDLKSGLVEVEQFLSHFIHRKMQQTATSVTDGLENARGLQLALEKLLL TVHESNEKVERSYELMVHSASTQISGGVGEAVANVEAAIAASASLRKELAEKESKRTCRGLQNFPTA* |
Coding | >Hirsu2|10843 ATGTCATGCCCTCAAAGGACGCTCTGCTTCCTTCGAGATATCATCTGTTTTCTCTGCCTGTTCGTCTCGATCGCT CAGGCGTTGTCGTGGGGCATCGCCAATGGCCCGAACCGGGCAGCCCCGACAAAGCCGCAGCCCGTCCACCATGAC TCGTCTCGGCCGATTGGATCCAAACATAGATCCTCGAGCATATACGAGCTTGCACTGAGCGAGTTGCAGGAACTC GAGTCTGAGCCCCTCTGTCACCGCATCGCGGCCCGTCTGCTCGTCAATAACTGTCAGCTACTGGACGGCCATGAT GAAGCGTCCGTCTTGACTGACAGCGGCAGAGCGACCAGGGATTTCGTTGACTTCTTCGCCGCCAGCCTGGCTATA TGCGACTTGGAGCGAGCGAGCTTCCTCATTCCTCCTCCTTGCTCCAAATTTCGAGAGTCCGTCCTCGCCAAGATA CCCGTGCCTTCGAAACCCCACCTCCACGTGTCGCCCTCCGAGATTGACAGCTGCCTCCAGGGCTTGGCTCGATCC GACTCGGCCTGGAATACATGGGTTAGCTATAGACACAAGGCGTTGAGGTTCTGCGACGCGGCTCGCGTCGAGAAC GAGAAAGACAAGAACATCCACCTGTTCCAAAGAATCACCAAAGTTCTCGACAGGCTGACCAGCCAGGCAGAATCG GATCTTGAGGCTCGATTTGAAGCCTTGAACCAGGTGTTTCGAGATACGAGTGCCAACTTGGAAGGTATCAAGCCG CGACTGAGTGATTTGAAGAGTGGGCTTGTTGAAGTCGAGCAATTCCTATCCCACTTCATTCATCGGAAGATGCAG CAGACAGCGACAAGCGTGACGGACGGGCTGGAAAACGCGCGAGGCCTGCAACTTGCGCTCGAAAAGCTGCTGTTG ACGGTGCATGAGAGCAACGAGAAAGTGGAGCGCTCCTACGAACTGATGGTGCATTCCGCCTCGACACAGATCAGT GGCGGCGTGGGAGAGGCCGTGGCAAACGTCGAAGCTGCAATTGCCGCTTCGGCTAGCCTGCGAAAGGAGCTCGCC GAAAAGGAATCGAAGCGGACATGCAGAGGCTTGCAGAACTTTCCGACAGCTTGA |
Transcript | >Hirsu2|10843 ATGTCATGCCCTCAAAGGACGCTCTGCTTCCTTCGAGATATCATCTGTTTTCTCTGCCTGTTCGTCTCGATCGCT CAGGCGTTGTCGTGGGGCATCGCCAATGGCCCGAACCGGGCAGCCCCGACAAAGCCGCAGCCCGTCCACCATGAC TCGTCTCGGCCGATTGGATCCAAACATAGATCCTCGAGCATATACGAGCTTGCACTGAGCGAGTTGCAGGAACTC GAGTCTGAGCCCCTCTGTCACCGCATCGCGGCCCGTCTGCTCGTCAATAACTGTCAGCTACTGGACGGCCATGAT GAAGCGTCCGTCTTGACTGACAGCGGCAGAGCGACCAGGGATTTCGTTGACTTCTTCGCCGCCAGCCTGGCTATA TGCGACTTGGAGCGAGCGAGCTTCCTCATTCCTCCTCCTTGCTCCAAATTTCGAGAGTCCGTCCTCGCCAAGATA CCCGTGCCTTCGAAACCCCACCTCCACGTGTCGCCCTCCGAGATTGACAGCTGCCTCCAGGGCTTGGCTCGATCC GACTCGGCCTGGAATACATGGGTTAGCTATAGACACAAGGCGTTGAGGTTCTGCGACGCGGCTCGCGTCGAGAAC GAGAAAGACAAGAACATCCACCTGTTCCAAAGAATCACCAAAGTTCTCGACAGGCTGACCAGCCAGGCAGAATCG GATCTTGAGGCTCGATTTGAAGCCTTGAACCAGGTGTTTCGAGATACGAGTGCCAACTTGGAAGGTATCAAGCCG CGACTGAGTGATTTGAAGAGTGGGCTTGTTGAAGTCGAGCAATTCCTATCCCACTTCATTCATCGGAAGATGCAG CAGACAGCGACAAGCGTGACGGACGGGCTGGAAAACGCGCGAGGCCTGCAACTTGCGCTCGAAAAGCTGCTGTTG ACGGTGCATGAGAGCAACGAGAAAGTGGAGCGCTCCTACGAACTGATGGTGCATTCCGCCTCGACACAGATCAGT GGCGGCGTGGGAGAGGCCGTGGCAAACGTCGAAGCTGCAATTGCCGCTTCGGCTAGCCTGCGAAAGGAGCTCGCC GAAAAGGAATCGAAGCGGACATGCAGAGGCTTGCAGAACTTTCCGACAGCTTGA |
Gene | >Hirsu2|10843 ATGTCATGCCCTCAAAGGACGCTCTGCTTCCTTCGAGATATCATCTGTTTTCTCTGCCTGTTCGTCTCGATCGCT CAGGCGTTGTCGTGGGGCATCGCCAATGGCCCGAACCGGGCAGCCCCGACAAAGCCGCAGCCCGTCCACCATGAC TCGTCTCGGCCGATTGGATCCAAACATAGATCCTCGAGCATATACGAGCTTGCACTGAGCGAGTTGCAGGAACTC GAGTCTGAGCCCCTCTGTCACCGCATCGCGGCCCGTCTGCTCGTCAATAACTGTCAGCTACTGGACGGCCATGAT GAAGCGTCCGTCTTGACTGACAGCGGCAGAGCGACCAGGGATTTCGTTGACTTCTTCGCCGCCAGCCTGGCTATA TGCGACTTGGAGCGAGCGAGCTTCCTCATTCCTCCTCCTTGCTCCAAATTTCGAGAGTCCGTCCTCGCCAAGATA CCCGTGCCTTCGAAACCCCACCTCCACGTGTCGCCCTCCGAGATTGACAGCTGCCTCCAGGGCTTGGCTCGATCC GACTCGGCCTGGAATACATGGGTTAGCTATAGACACAAGGCGTTGAGGTTCTGCGACGCGGCTCGCGTCGAGAAC GAGAAAGGTCTGCTGACCCGACCCTTCCAACTATCTTGCGAACCAGGCTGTTGACCATGACTATTCGCAGACAAG AACATCCACCTGTTCCAAAGAATCACCAAAGTTCTCGACAGGCTGACCAGCCAGGCAGAATCGGATCTTGAGGCT CGATTTGAAGCCTTGAACCAGGTGTTTCGAGATACGAGTGCCAACTTGGAAGGTATCAAGCCGCGACTGAGTGAT TTGAAGAGTGGGCTTGTTGAAGTCGAGCAATTCCTATCCCACTTCATTCATCGGAAGATGCAGGTATTCTGTCCT CTTTTCCTCTCGGACGAGGACTCACAGAGCTGACTTGCCTATAGCAGACAGCGACAAGCGTGACGGACGGGCTGG AAAACGCGCGAGGCCTGCAACTTGCGCTCGAAAAGCTGCTGTTGACGGTGCATGAGAGCAACGAGAAAGTGGAGC GCTCCTACGAACTGATGGTGCATTCCGCCTCGACACAGATCAGTGGCGGCGTGGGAGAGGCCGTGGCAAACGTCG AAGCTGCAATTGCCGCTTCGGCTAGCCTGCGAAAGGAGCTCGTATGTTCATTTGCCGCCTTCATCAGATCTCCTG AGTACAGTCTGACGTTGCCAGGCCGAGTCGAAGTTGCAAGCTGCGACAATTGCCCAAAAACAGAAAGGAATCGAA GCGGTCAGTTTTCAACGTCTTGAACTTCAAACGTGTTGTGCTGACTGACATGGGCGGCCGCAACAGGACATGCAG AGGCTTGCAGAACTTTCCGACAGCTTGA |