Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10816
Gene name
LocationContig_908:9862..10545
Strand-
Gene length (bp)683
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6627 0.4479 0.4726 0.155 0.2661 0.032 0.1582 0.1914 0.1759 0.5948

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8601
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10816 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10816
MRAARERICAVLAAIRLLAERTRAKTACCSADLAALKAFSRSVVDGLPGEGLDLGHARPVPDLFQQPLGLVQGLL
DPNGALLDLLLLPCERGADDVGPRAVVDVAPADLGVVRVALDLDAERTARLLGRLGRLDQLGRDQHLRLAREGLE
AGQAQRRGRVAVRDDVGEVLCDGPWAVPVVARNPHLEQLVEGLTVCRDDAVTAQRIRQYP*
Coding >Hirsu2|10816
ATGCGGGCGGCGAGGGAGCGGATCTGCGCCGTCCTGGCCGCGATCCGGCTGTTGGCGGAGCGGACGCGGGCGAAG
ACGGCCTGCTGCTCCGCCGACTTGGCCGCCTTGAAGGCCTTCTCCAGGTCGGTCGTCGATGGCCTGCCTGGCGAG
GGCCTCGATCTCGGCCACGCCCGTCCCGTCCCCGACCTTTTCCAGCAGCCTCTTGGCCTCGTCCAGGGCCTTCTC
GATCCGAACGGTGCGCTCCTGGATCTCCTTCTCCTCCCTTGTGAGCGGGGAGCCGATGACGTTGGGCCACGAGCT
GTAGTCGACGTCGCCCCGGCGGATCTTGGCGTTGTCCGTGTCGCACTCGACCTGGATGCCGAGCGGACCGCCCGG
CTGCTCGGCCGCCTGGGTCGTCTCGACCAGCTGGGGCGGGATCAGCATCTGCGTCTTGCCCGGGAGGGCCTCGAA
GCCGGCCAGGCGCAGCGTCGTGGCCGGGTCGCAGTGCGGGACGACGTTGGTGAGGTACTCTGCGATGGCCCCTGG
GCTGTTCCAGTGGTAGCGAGGAATCCACACCTTGAGCAGCTGGTCGAAGGCCTCACGGTCTGCCGTGATGACGCA
GTCACTGCGCAGCGAATCCGTCAGTACCCGTAG
Transcript >Hirsu2|10816
ATGCGGGCGGCGAGGGAGCGGATCTGCGCCGTCCTGGCCGCGATCCGGCTGTTGGCGGAGCGGACGCGGGCGAAG
ACGGCCTGCTGCTCCGCCGACTTGGCCGCCTTGAAGGCCTTCTCCAGGTCGGTCGTCGATGGCCTGCCTGGCGAG
GGCCTCGATCTCGGCCACGCCCGTCCCGTCCCCGACCTTTTCCAGCAGCCTCTTGGCCTCGTCCAGGGCCTTCTC
GATCCGAACGGTGCGCTCCTGGATCTCCTTCTCCTCCCTTGTGAGCGGGGAGCCGATGACGTTGGGCCACGAGCT
GTAGTCGACGTCGCCCCGGCGGATCTTGGCGTTGTCCGTGTCGCACTCGACCTGGATGCCGAGCGGACCGCCCGG
CTGCTCGGCCGCCTGGGTCGTCTCGACCAGCTGGGGCGGGATCAGCATCTGCGTCTTGCCCGGGAGGGCCTCGAA
GCCGGCCAGGCGCAGCGTCGTGGCCGGGTCGCAGTGCGGGACGACGTTGGTGAGGTACTCTGCGATGGCCCCTGG
GCTGTTCCAGTGGTAGCGAGGAATCCACACCTTGAGCAGCTGGTCGAAGGCCTCACGGTCTGCCGTGATGACGCA
GTCACTGCGCAGCGAATCCGTCAGTACCCGTAG
Gene >Hirsu2|10816
ATGCGGGCGGCGAGGGAGCGGATCTGCGCCGTCCTGGCCGCGATCCGGCTGTTGGCGGAGCGGACGCGGGCGAAG
ACGGCCTGCTGCTCCGCCGACTTGGCCGCCTTGAAGGCCTTCTCCAGGTCGGTCAGGTCCAGCCATTCGACCTTG
TTGATGACCTGGGCCACGGCCGCCAGGTCGTCGATGGCCTGCCTGGCGAGGGCCTCGATCTCGGCCACGCCCGTC
CCGTCCCCGACCTTTTCCAGCAGCCTCTTGGCCTCGTCCAGGGCCTTCTCGATCCGAACGGTGCGCTCCTGGATC
TCCTTCTCCTCCCTTGTGAGCGGGGAGCCGATGACGTTGGGCCACGAGCTGTAGTCGACGTCGCCCCGGCGGATC
TTGGCGTTGTCCGTGTCGCACTCGACCTGGATGCCGAGCGGACCGCCCGGCTGCTCGGCCGCCTGGGTCGTCTCG
ACCAGCTGGGGCGGGATCAGCATCTGCGTCTTGCCCGGGAGGGCCTCGAAGCCGGCCAGGCGCAGCGTCGTGGCC
GGGTCGCAGTGCGGGACGACGTTGGTGAGGTACTCTGCGATGGCCCCTGGGCTGTTCCAGTGGTAGCGAGGAATC
CACACCTTGAGCAGCTGGTCGAAGGCCTCACGGTCTGCCGTGATGACGCAGTCACTGCGCAGCGAATCCGTCAGT
ACCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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