Protein ID | Hirsu2|10815 |
Gene name | |
Location | Contig_908:9458..9791 |
Strand | + |
Gene length (bp) | 333 |
Transcript length (bp) | 252 |
Coding sequence length (bp) | 252 |
Protein length (aa) | 84 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0962 | 0.0787 | 0.9363 | 0.0671 | 0.1021 | 0.0155 | 0.0661 | 0.1074 | 0.035 | 0.0043 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.998779 |
Orthofinder run ID | 4 |
Orthogroup | 663 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10815 MKHVLVLLSAAACVSARRGPEATAHHKRGPERMVIGYRSVSAEQAEIYNNARTLVYTKNVGVQQLGPGVYTTPDS GWWKQSGP* |
Coding | >Hirsu2|10815 ATGAAGCACGTCTTGGTCCTTTTGTCGGCTGCGGCCTGCGTCTCGGCCCGGCGCGGTCCGGAGGCCACGGCGCAC CACAAGCGAGGGCCGGAGAGGATGGTTATCGGGTACCGGAGCGTCAGCGCGGAGCAAGCCGAAATCTACAACAAT GCACGCACGCTGGTATACACCAAAAACGTGGGCGTGCAGCAGCTGGGCCCGGGCGTCTACACGACTCCGGACAGC GGATGGTGGAAGCAGAGCGGCCCCTAG |
Transcript | >Hirsu2|10815 ATGAAGCACGTCTTGGTCCTTTTGTCGGCTGCGGCCTGCGTCTCGGCCCGGCGCGGTCCGGAGGCCACGGCGCAC CACAAGCGAGGGCCGGAGAGGATGGTTATCGGGTACCGGAGCGTCAGCGCGGAGCAAGCCGAAATCTACAACAAT GCACGCACGCTGGTATACACCAAAAACGTGGGCGTGCAGCAGCTGGGCCCGGGCGTCTACACGACTCCGGACAGC GGATGGTGGAAGCAGAGCGGCCCCTAG |
Gene | >Hirsu2|10815 ATGAAGCACGTCTTGGTCCTTTTGTCGGCTGCGGCCTGCGTCTCGGCCCGGCGCGGTCCGGAGGCCACGGCGCAC CACAAGCGAGGGCCGGAGAGGATGGTTATCGGGTACCGGAGCGTCAGCGCGGTAGGTTCTCCCGCGTCCTGCAGT TGCTGTGACGATCGATGCCCGTTTCGAGGCGACGCAACTGACGTGGCCCGGACACAGGAGCAAGCCGAAATCTAC AACAATGCACGCACGCTGGTATACACCAAAAACGTGGGCGTGCAGCAGCTGGGCCCGGGCGTCTACACGACTCCG GACAGCGGATGGTGGAAGCAGAGCGGCCCCTAG |