Protein ID | Hirsu2|10814 |
Gene name | |
Location | Contig_908:6298..7724 |
Strand | - |
Gene length (bp) | 1426 |
Transcript length (bp) | 1353 |
Coding sequence length (bp) | 1353 |
Protein length (aa) | 451 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1646 | 0.0898 | 0.9129 | 0.1437 | 0.1447 | 0.0323 | 0.2315 | 0.2387 | 0.341 | 0.0028 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999755 |
Orthofinder run ID | 4 |
Orthogroup | 49 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10814 MGSKLALLAVLAACLPQGLMALRNSTNMAPRNGTNMKLPFLPGERCTQMSERCAGSDFWCGQAFKSDEAATQEEC FQRRRRHPVHRIEWARPSVDSDCLPHIEGCSGTESMCGHITDLDRRLSCFKARKKAGWTMRDSPECPKPGTDEDE RCAGVKAWCRAEERLALYGNETSCLEFRRHPLKATVPWMEPQQACPTRFVEPCRGTEDFCGSIDKKPRRRMCFEH HELRPYDTVLNASRCALSWQGSMTELCQGSHWWCHQSKVAKRLYGSAEECLRYREKPPQTRRPFYPPVEGECQPG ADPEKECLGTEHICLKQMDEPNRPRCLEERTTAPWYDSLPQPSCNQTTERCQRSARWCLGEIADWYGSSESCYKI RGWATGSLGDVVRAKEEAWLERLQAELVRFMEPVILHGMLHMYLSAAEATAAAQEKTRRLIRDAREKTNSQVQGG * |
Coding | >Hirsu2|10814 ATGGGCTCCAAGCTGGCTCTGCTTGCCGTTCTGGCTGCATGCTTGCCTCAGGGTCTGATGGCCCTGCGAAACAGC ACCAACATGGCGCCGCGGAACGGCACCAACATGAAGCTCCCCTTTCTGCCGGGCGAGAGATGCACGCAGATGAGC GAGCGCTGCGCCGGCAGTGACTTCTGGTGCGGGCAGGCGTTCAAAAGCGACGAGGCCGCCACGCAGGAGGAGTGC TTCCAGAGGCGGAGGAGACACCCGGTCCATCGGATCGAATGGGCCCGGCCCAGTGTTGACTCCGACTGCTTGCCC CATATCGAGGGCTGCAGCGGCACGGAGAGCATGTGCGGCCACATCACCGATCTGGACCGCCGCCTGAGCTGCTTC AAGGCCCGCAAGAAGGCCGGCTGGACGATGCGCGACTCGCCCGAGTGTCCGAAGCCCGGCACCGACGAGGACGAG CGCTGCGCCGGCGTCAAGGCCTGGTGCCGGGCCGAGGAGCGCCTTGCTCTCTACGGCAACGAGACCAGCTGTCTC GAGTTCCGCAGGCACCCGTTAAAGGCCACGGTGCCGTGGATGGAGCCGCAGCAGGCCTGTCCCACGAGGTTCGTC GAGCCGTGCCGCGGCACGGAAGACTTCTGCGGCTCCATCGACAAGAAACCCCGGCGCAGGATGTGCTTCGAGCAC CACGAGCTCAGGCCCTACGACACCGTCCTGAACGCGTCCCGCTGCGCCCTTTCCTGGCAGGGCTCCATGACCGAG CTGTGCCAGGGCTCGCACTGGTGGTGCCACCAGTCCAAGGTCGCGAAACGGCTGTACGGCTCCGCCGAGGAGTGC CTCCGATACCGGGAGAAGCCGCCGCAGACGCGGCGTCCGTTCTATCCCCCGGTCGAGGGCGAGTGCCAGCCCGGC GCGGACCCGGAGAAGGAGTGCCTAGGCACCGAGCACATCTGCCTGAAGCAGATGGACGAGCCCAACCGGCCGAGG TGCCTGGAGGAGCGCACGACGGCGCCGTGGTACGATTCCTTGCCGCAGCCGAGCTGCAACCAGACGACGGAGCGG TGCCAGCGCTCGGCCCGGTGGTGCCTCGGGGAGATCGCCGACTGGTACGGCTCGTCCGAGTCGTGCTACAAGATC CGCGGCTGGGCGACCGGCTCGTTGGGCGACGTCGTCCGCGCCAAGGAGGAGGCCTGGCTGGAAAGGCTGCAGGCC GAGCTCGTTCGCTTCATGGAGCCCGTGATACTTCATGGGATGCTGCACATGTACCTGTCGGCGGCCGAGGCGACC GCCGCGGCTCAGGAGAAGACGCGTCGCTTGATCCGGGACGCGCGCGAGAAGACGAACAGCCAGGTTCAGGGAGGG TGA |
Transcript | >Hirsu2|10814 ATGGGCTCCAAGCTGGCTCTGCTTGCCGTTCTGGCTGCATGCTTGCCTCAGGGTCTGATGGCCCTGCGAAACAGC ACCAACATGGCGCCGCGGAACGGCACCAACATGAAGCTCCCCTTTCTGCCGGGCGAGAGATGCACGCAGATGAGC GAGCGCTGCGCCGGCAGTGACTTCTGGTGCGGGCAGGCGTTCAAAAGCGACGAGGCCGCCACGCAGGAGGAGTGC TTCCAGAGGCGGAGGAGACACCCGGTCCATCGGATCGAATGGGCCCGGCCCAGTGTTGACTCCGACTGCTTGCCC CATATCGAGGGCTGCAGCGGCACGGAGAGCATGTGCGGCCACATCACCGATCTGGACCGCCGCCTGAGCTGCTTC AAGGCCCGCAAGAAGGCCGGCTGGACGATGCGCGACTCGCCCGAGTGTCCGAAGCCCGGCACCGACGAGGACGAG CGCTGCGCCGGCGTCAAGGCCTGGTGCCGGGCCGAGGAGCGCCTTGCTCTCTACGGCAACGAGACCAGCTGTCTC GAGTTCCGCAGGCACCCGTTAAAGGCCACGGTGCCGTGGATGGAGCCGCAGCAGGCCTGTCCCACGAGGTTCGTC GAGCCGTGCCGCGGCACGGAAGACTTCTGCGGCTCCATCGACAAGAAACCCCGGCGCAGGATGTGCTTCGAGCAC CACGAGCTCAGGCCCTACGACACCGTCCTGAACGCGTCCCGCTGCGCCCTTTCCTGGCAGGGCTCCATGACCGAG CTGTGCCAGGGCTCGCACTGGTGGTGCCACCAGTCCAAGGTCGCGAAACGGCTGTACGGCTCCGCCGAGGAGTGC CTCCGATACCGGGAGAAGCCGCCGCAGACGCGGCGTCCGTTCTATCCCCCGGTCGAGGGCGAGTGCCAGCCCGGC GCGGACCCGGAGAAGGAGTGCCTAGGCACCGAGCACATCTGCCTGAAGCAGATGGACGAGCCCAACCGGCCGAGG TGCCTGGAGGAGCGCACGACGGCGCCGTGGTACGATTCCTTGCCGCAGCCGAGCTGCAACCAGACGACGGAGCGG TGCCAGCGCTCGGCCCGGTGGTGCCTCGGGGAGATCGCCGACTGGTACGGCTCGTCCGAGTCGTGCTACAAGATC CGCGGCTGGGCGACCGGCTCGTTGGGCGACGTCGTCCGCGCCAAGGAGGAGGCCTGGCTGGAAAGGCTGCAGGCC GAGCTCGTTCGCTTCATGGAGCCCGTGATACTTCATGGGATGCTGCACATGTACCTGTCGGCGGCCGAGGCGACC GCCGCGGCTCAGGAGAAGACGCGTCGCTTGATCCGGGACGCGCGCGAGAAGACGAACAGCCAGGTTCAGGGAGGG TGA |
Gene | >Hirsu2|10814 ATGGGCTCCAAGCTGGCTCTGCTTGCCGTTCTGGCTGCATGCTTGCCTCAGGTGCGTAGGGAAGCCGTACGGATG CCACGAAGATGATATGGACGAGGGTGGCTGACAACCTCGCGCTCCTCAGGGTCTGATGGCCCTGCGAAACAGCAC CAACATGGCGCCGCGGAACGGCACCAACATGAAGCTCCCCTTTCTGCCGGGCGAGAGATGCACGCAGATGAGCGA GCGCTGCGCCGGCAGTGACTTCTGGTGCGGGCAGGCGTTCAAAAGCGACGAGGCCGCCACGCAGGAGGAGTGCTT CCAGAGGCGGAGGAGACACCCGGTCCATCGGATCGAATGGGCCCGGCCCAGTGTTGACTCCGACTGCTTGCCCCA TATCGAGGGCTGCAGCGGCACGGAGAGCATGTGCGGCCACATCACCGATCTGGACCGCCGCCTGAGCTGCTTCAA GGCCCGCAAGAAGGCCGGCTGGACGATGCGCGACTCGCCCGAGTGTCCGAAGCCCGGCACCGACGAGGACGAGCG CTGCGCCGGCGTCAAGGCCTGGTGCCGGGCCGAGGAGCGCCTTGCTCTCTACGGCAACGAGACCAGCTGTCTCGA GTTCCGCAGGCACCCGTTAAAGGCCACGGTGCCGTGGATGGAGCCGCAGCAGGCCTGTCCCACGAGGTTCGTCGA GCCGTGCCGCGGCACGGAAGACTTCTGCGGCTCCATCGACAAGAAACCCCGGCGCAGGATGTGCTTCGAGCACCA CGAGCTCAGGCCCTACGACACCGTCCTGAACGCGTCCCGCTGCGCCCTTTCCTGGCAGGGCTCCATGACCGAGCT GTGCCAGGGCTCGCACTGGTGGTGCCACCAGTCCAAGGTCGCGAAACGGCTGTACGGCTCCGCCGAGGAGTGCCT CCGATACCGGGAGAAGCCGCCGCAGACGCGGCGTCCGTTCTATCCCCCGGTCGAGGGCGAGTGCCAGCCCGGCGC GGACCCGGAGAAGGAGTGCCTAGGCACCGAGCACATCTGCCTGAAGCAGATGGACGAGCCCAACCGGCCGAGGTG CCTGGAGGAGCGCACGACGGCGCCGTGGTACGATTCCTTGCCGCAGCCGAGCTGCAACCAGACGACGGAGCGGTG CCAGCGCTCGGCCCGGTGGTGCCTCGGGGAGATCGCCGACTGGTACGGCTCGTCCGAGTCGTGCTACAAGATCCG CGGCTGGGCGACCGGCTCGTTGGGCGACGTCGTCCGCGCCAAGGAGGAGGCCTGGCTGGAAAGGCTGCAGGCCGA GCTCGTTCGCTTCATGGAGCCCGTGATACTTCATGGGATGCTGCACATGTACCTGTCGGCGGCCGAGGCGACCGC CGCGGCTCAGGAGAAGACGCGTCGCTTGATCCGGGACGCGCGCGAGAAGACGAACAGCCAGGTTCAGGGAGGGTG A |