Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1081
Gene name
LocationContig_1224:5288..5775
Strand+
Gene length (bp)487
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20222 DUF6581 Family of unknown function (DUF6581) 1.5E-37 4 137

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5025 0.4191 0.2597 0.0883 0.2462 0.013 0.198 0.2366 0.2176 0.0745

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup378
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7576
Ophiocordyceps australis map64 (Brazil) OphauB2|3739
Ophiocordyceps camponoti-floridani Ophcf2|04740
Ophiocordyceps camponoti-floridani Ophcf2|04741
Ophiocordyceps camponoti-rufipedis Ophun1|1
Ophiocordyceps camponoti-rufipedis Ophun1|2
Ophiocordyceps kimflemingae Ophio5|4150
Ophiocordyceps kimflemingae Ophio5|4151
Ophiocordyceps subramaniannii Hirsu2|1081 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1081
MSHSPKYDEAAAFKGHLDSTFRRHETMTVPYTLNDGAMMALTNMSAAGRIRLMPIDLPNIPLGFEPGNYESRKYP
KSYYYFALEVVPTETYEYNEDIEVLHAVTRESPPTESLRGELPQWVSLLGQSNTQRWSEMLALSTLS*
Coding >Hirsu2|1081
ATGTCCCATAGCCCCAAGTACGATGAAGCGGCGGCGTTCAAGGGGCACCTCGACTCCACATTTCGCCGGCATGAA
ACCATGACGGTACCGTACACGCTCAACGACGGCGCCATGATGGCCTTGACCAATATGAGCGCGGCAGGGAGGATT
CGGTTGATGCCCATAGACCTGCCCAATATCCCTCTTGGCTTTGAGCCGGGCAACTACGAGAGCCGGAAATACCCT
AAGTCGTACTACTATTTCGCTCTCGAGGTGGTACCGACAGAAACGTACGAGTACAATGAGGATATCGAGGTCCTG
CATGCCGTCACCAGGGAAAGCCCGCCTACGGAAAGCCTGCGAGGCGAACTGCCGCAGTGGGTCAGTCTTCTGGGG
CAGAGCAACACGCAGCGATGGTCCGAGATGTTGGCACTCTCCACCCTCTCCTAG
Transcript >Hirsu2|1081
ATGTCCCATAGCCCCAAGTACGATGAAGCGGCGGCGTTCAAGGGGCACCTCGACTCCACATTTCGCCGGCATGAA
ACCATGACGGTACCGTACACGCTCAACGACGGCGCCATGATGGCCTTGACCAATATGAGCGCGGCAGGGAGGATT
CGGTTGATGCCCATAGACCTGCCCAATATCCCTCTTGGCTTTGAGCCGGGCAACTACGAGAGCCGGAAATACCCT
AAGTCGTACTACTATTTCGCTCTCGAGGTGGTACCGACAGAAACGTACGAGTACAATGAGGATATCGAGGTCCTG
CATGCCGTCACCAGGGAAAGCCCGCCTACGGAAAGCCTGCGAGGCGAACTGCCGCAGTGGGTCAGTCTTCTGGGG
CAGAGCAACACGCAGCGATGGTCCGAGATGTTGGCACTCTCCACCCTCTCCTAG
Gene >Hirsu2|1081
ATGTCCCATAGCCCCAAGTACGATGAAGCGGCGGCGTTCAAGGGGCACCTCGACTCCACATTTCGCCGGCATGAA
ACCATGACGGTACCGTACACGCTCAACGACGGCGCCATGATGGCCTTGACCAATATGAGCGCGGCAGGGAGGATT
CGGTTGATGCCCATAGACCTGCCCAATATCCCTCTTGGCTTTGAGCCGGGCAACTACGAGAGCCGGAAATACCCT
AAGTCGTACTACTATTTCGCTCTCGAGGTGGTACCGACAGAAACGTACGAGTACAATGAGGATATCGAGGTCCTG
CATGCCGTCACCAGGGAAAGCCCGCCTACGGAAAGCCTGCGAGGCGAACTGCCGCAGTGGGTCAGTCTTCTGGGG
CAGAGCAACACGCAGCGATGGTCCGAGATGTTGGGTGCGTTCTGCTTTTCCTTCGCCACGCGAGGATCAATGACC
ATCGAGGGCATCTGCAGCACTCTCCACCCTCTCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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