Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10780
Gene name
Location	Contig_90:38651..40093
Strand	+
Gene length (bp)	1442
Transcript length (bp)	1209
Coding sequence length (bp)	1209
Protein length (aa)	403

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18388	Atg29_N	Atg29 N-terminal domain	1.1E-25	2	54

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|A7KAN7\|ATG29_PENRW	Autophagy-related protein 29 OS=Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) GN=atg29 PE=3 SV=1	2	396	1.0E-48
sp\|Q6FK11\|ATG29_CANGA	Autophagy-related protein 29 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG29 PE=3 SV=1	4	93	6.0E-08
sp\|Q75F26\|ATG29_ASHGO	Autophagy-related protein 29 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG29 PE=3 SV=1	3	86	1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10780 MYTIFVRVPIPRGSFVDPPPVHWDSSKDDALWKILSGAAQTDIDWHQVADRFDVPVDFLLQQVAYLTERHASQVR AQVRKATAAARGSAAPSPVPGAEHPRATSALSVRRDSPMTRHDSGSTVTSPLAGSGRPATSRNTSANTAVQRDAS GSSGRLPVATRAIDTSGRRRLSSLPISPAARSPETTPGAEQARAASPGPAESNSTTSSDDEGSSPAQSRIIRRPP RFQQQEPTQSYPGGDDDDGEESEPAFRLYQATADQASAQDLASTLRGDGRVVQERGYKSPTKDVALQSLTSDSSA SSAAILHRPSKSRDQKAVGPLSPRRTAELAGRSPGGKGRALSREGSEGTPSMGSSFSDLDDASVTQSALEEALAS HMGRGAISSRFSISQAFRSRYNPGPNQ*
Coding	>Hirsu2\|10780 ATGTATACCATCTTCGTGCGCGTGCCGATTCCGCGCGGAAGCTTTGTCGATCCCCCGCCGGTGCACTGGGACTCG AGCAAAGACGACGCTCTCTGGAAGATTCTCTCGGGTGCCGCACAGACCGATATAGACTGGCATCAGGTAGCCGAC CGCTTCGATGTGCCCGTCGACTTTCTGCTTCAGCAGGTGGCCTACCTGACAGAGCGGCATGCATCGCAGGTCCGT GCCCAGGTTCGCAAGGCCACGGCGGCTGCCAGAGGCTCCGCCGCCCCGTCACCCGTCCCAGGCGCCGAGCACCCG CGAGCCACATCGGCCTTGTCCGTCCGGCGCGACTCGCCCATGACACGTCACGACAGCGGCAGCACCGTCACCTCG CCTCTCGCTGGATCGGGACGGCCGGCCACGTCGCGCAACACGTCGGCCAACACGGCGGTTCAGAGAGACGCTAGC GGGTCATCCGGGAGACTGCCCGTCGCGACCCGTGCCATCGATACAAGCGGCCGGAGACGCCTGTCGTCGCTGCCA ATCTCACCGGCCGCCAGGTCTCCCGAAACGACACCCGGGGCCGAGCAGGCGAGAGCGGCGTCGCCGGGTCCGGCC GAGTCCAACTCGACGACGTCGTCGGATGATGAGGGGTCGAGTCCCGCCCAGTCCCGCATCATCCGTCGACCGCCA CGGTTCCAGCAGCAGGAACCTACTCAGTCGTATCCGGGCGGGGACGACGACGACGGGGAAGAATCGGAGCCAGCC TTCCGTCTGTACCAAGCCACAGCAGACCAGGCATCGGCCCAAGACCTGGCCTCGACGCTCAGGGGCGATGGCCGA GTTGTCCAAGAGCGCGGCTACAAGAGCCCGACCAAGGATGTGGCCCTGCAATCTCTGACTTCCGACTCCTCGGCA AGCTCGGCCGCCATTCTCCACCGTCCCAGCAAATCCCGCGACCAGAAAGCAGTCGGCCCGCTGTCGCCGCGCCGG ACCGCCGAGTTGGCCGGGCGCAGCCCAGGCGGCAAGGGCAGGGCCTTGTCGCGGGAGGGCAGCGAGGGCACGCCG AGCATGGGGAGCAGCTTCAGCGACCTCGACGATGCATCCGTGACCCAGTCGGCGCTGGAAGAGGCCTTGGCCAGC CACATGGGCCGCGGGGCCATCAGCAGCCGCTTCAGCATCAGCCAGGCCTTTCGTAGTCGTTACAACCCGGGCCCA AACCAGTGA
Transcript	>Hirsu2\|10780 ATGTATACCATCTTCGTGCGCGTGCCGATTCCGCGCGGAAGCTTTGTCGATCCCCCGCCGGTGCACTGGGACTCG AGCAAAGACGACGCTCTCTGGAAGATTCTCTCGGGTGCCGCACAGACCGATATAGACTGGCATCAGGTAGCCGAC CGCTTCGATGTGCCCGTCGACTTTCTGCTTCAGCAGGTGGCCTACCTGACAGAGCGGCATGCATCGCAGGTCCGT GCCCAGGTTCGCAAGGCCACGGCGGCTGCCAGAGGCTCCGCCGCCCCGTCACCCGTCCCAGGCGCCGAGCACCCG CGAGCCACATCGGCCTTGTCCGTCCGGCGCGACTCGCCCATGACACGTCACGACAGCGGCAGCACCGTCACCTCG CCTCTCGCTGGATCGGGACGGCCGGCCACGTCGCGCAACACGTCGGCCAACACGGCGGTTCAGAGAGACGCTAGC GGGTCATCCGGGAGACTGCCCGTCGCGACCCGTGCCATCGATACAAGCGGCCGGAGACGCCTGTCGTCGCTGCCA ATCTCACCGGCCGCCAGGTCTCCCGAAACGACACCCGGGGCCGAGCAGGCGAGAGCGGCGTCGCCGGGTCCGGCC GAGTCCAACTCGACGACGTCGTCGGATGATGAGGGGTCGAGTCCCGCCCAGTCCCGCATCATCCGTCGACCGCCA CGGTTCCAGCAGCAGGAACCTACTCAGTCGTATCCGGGCGGGGACGACGACGACGGGGAAGAATCGGAGCCAGCC TTCCGTCTGTACCAAGCCACAGCAGACCAGGCATCGGCCCAAGACCTGGCCTCGACGCTCAGGGGCGATGGCCGA GTTGTCCAAGAGCGCGGCTACAAGAGCCCGACCAAGGATGTGGCCCTGCAATCTCTGACTTCCGACTCCTCGGCA AGCTCGGCCGCCATTCTCCACCGTCCCAGCAAATCCCGCGACCAGAAAGCAGTCGGCCCGCTGTCGCCGCGCCGG ACCGCCGAGTTGGCCGGGCGCAGCCCAGGCGGCAAGGGCAGGGCCTTGTCGCGGGAGGGCAGCGAGGGCACGCCG AGCATGGGGAGCAGCTTCAGCGACCTCGACGATGCATCCGTGACCCAGTCGGCGCTGGAAGAGGCCTTGGCCAGC CACATGGGCCGCGGGGCCATCAGCAGCCGCTTCAGCATCAGCCAGGCCTTTCGTAGTCGTTACAACCCGGGCCCA AACCAGTGA
Gene	>Hirsu2\|10780 ATGTATACCATCTTCGTGCGCGTGCCGATTCCGCGCGGAAGCTTTGTCGATCCCCCGCCGGTACGTGAATCCAGC TGCGCTACCGGGCCGCCGACCGTCGCTCACCAACTAGGTGCACTGGGACTCGAGCAAAGACGACGCTCTCTGGAA GATTCTCTCGGGTGCCGCACAGACCGATATAGACTGTGAGTCTCTGCCGCCTCACCATCTCTCGTCATTTCCACG TCCCGCTGACAATCAGGGCAGGGCATCAGGTGTAGGTGTCCCGCCCGGGCCGACACCTGTACCCCGACGAGCGGG CTGACTTTACGCAGAGCCGACCGCTTCGATGTGCCCGTCGACTTTCTGCTTCAGCAGGTGGCCTACCTGACAGAG CGGCATGCATCGCAGGTCCGTGCCCAGGTTCGCAAGGCCACGGCGGCTGCCAGAGGCTCCGCCGCCCCGTCACCC GTCCCAGGCGCCGAGCACCCGCGAGCCACATCGGCCTTGTCCGTCCGGCGCGACTCGCCCATGACACGTCACGAC AGCGGCAGCACCGTCACCTCGCCTCTCGCTGGATCGGGACGGCCGGCCACGTCGCGCAACACGTCGGCCAACACG GCGGTTCAGAGAGACGCTAGCGGGTCATCCGGGAGACTGCCCGTCGCGACCCGTGCCATCGATACAAGCGGCCGG AGACGCCTGTCGTCGCTGCCAATCTCACCGGCCGCCAGGTCTCCCGAAACGACACCCGGGGCCGAGCAGGCGAGA GCGGCGTCGCCGGGTCCGGCCGAGTCCAACTCGACGACGTCGTCGGATGATGAGGGGTCGAGTCCCGCCCAGTCC CGCATCATCCGTCGACCGCCACGGTTCCAGCAGCAGGAACCTACTCAGTCGTATCCGGGCGGGGACGACGACGAC GGGGAAGAATCGGAGCCAGCCTTCCGTCTGTACCAAGCCACAGCAGACCAGGCATCGGCCCAAGACCTGGCCTCG ACGCTCAGGGGCGATGGCCGAGTTGTCCAAGAGCGCGGCTACAAGAGCCCGACCAAGGATGTGGCCCTGCAATCT CTGACTTCCGACTCCTCGGCAAGCTCGGCCGCCATTCTCCACCGTCCCAGCAAATCCCGCGACCAGAAAGCAGTC GGCCCGCTGTCGCCGCGCCGGACCGCCGAGTTGGCCGGGCGCAGCCCAGGCGGCAAGGGCAGGGCCTTGTCGCGG GAGGGCAGCGAGGGCACGCCGAGCATGGGGAGCAGCTTCAGCGACCTCGACGGTAATGCGCAGAACCCCTCGTAC GGACCCAAAGCCCGTCCCCTTGACTGACGGGTTCAACAGATGCATCCGTGACCCAGTCGGCGCTGGAAGAGGCCT TGGCCAGCCACATGGGCCGCGGGGCCATCAGCAGCCGCTTCAGCATCAGCCAGGCCTTTCGTAGTCGTTACAACC CGGGCCCAAACCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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