Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1078
Gene name
LocationContig_1222:5042..6295
Strand-
Gene length (bp)1253
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Signal peptide 0.5064 0.5095 0.5294 0.0467 0.1588 0.0787 0.2922 0.1792 0.1619 0.0349

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8586
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1078 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1078
MHPTASYAPPPMTRPSRALLHPLSPLFYQAILCRHQRPHSPPLHPPPPPPPPRSSPPSQLSSSSTDAEPTGSTTT
TSSDAPLRLASVAQPSLIIFLGRASYFHSVACAYPLPRSLCLLFLGLLHLVSRLPSLRLHPPSPGPPLPVLLARS
PQSRLARGRLRRPPPKRRDKPIKDEPAAALVLCLTHTLSSSPLRNLPSATPAAGQQGLSLGLLTQSQPSSIRRSP
CPRGGVCALACVPASGLAVARRIALVHASREGLASLSVSIGYQHLAPPSDDAIVPISPLLCRFANGRGRRQSTIE
APFNEPWPTLLTHRRASPSRPDNYFWAPPPSEQATALYPEPAGPCSAPIAAAARHRAKPRALSNLFPLFFLRLPR
P*
Coding >Hirsu2|1078
ATGCACCCCACCGCATCCTATGCCCCTCCTCCCATGACACGCCCCTCCCGCGCACTCCTGCACCCTCTCTCCCCT
CTGTTCTATCAGGCAATCCTCTGTCGCCATCAGCGTCCTCACTCTCCTCCTCTTCATCCTCCTCCTCCTCCTCCC
CCTCCTCGCTCCTCGCCTCCTTCGCAGCTCTCCTCCTCCTCGACCGACGCAGAACCGACCGGCTCGACAACGACG
ACTAGTAGCGACGCCCCCCTCCGTCTCGCTTCCGTTGCCCAACCGTCTCTTATCATCTTCTTGGGTCGCGCTTCC
TATTTCCACTCAGTGGCCTGCGCCTATCCCCTCCCCCGCTCTCTGTGTCTTCTCTTCCTCGGTCTTCTCCATCTT
GTCTCTCGTCTTCCCTCTCTTCGCCTTCATCCTCCTTCTCCTGGTCCGCCTTTGCCCGTCCTCCTCGCTCGCTCG
CCACAGTCCCGACTTGCTCGAGGTCGACTACGACGTCCCCCCCCCAAACGACGAGACAAGCCGATAAAAGACGAG
CCGGCCGCGGCTCTTGTGCTCTGCCTCACTCACACACTCTCTTCCTCTCCTCTCCGTAACCTGCCGTCAGCTACT
CCAGCAGCCGGACAGCAGGGCCTCTCTCTCGGCCTGCTGACCCAATCACAGCCGTCCTCGATCCGTCGCTCGCCT
TGTCCTCGCGGGGGCGTGTGCGCGCTCGCGTGTGTGCCTGCGTCAGGCCTCGCTGTGGCCCGCCGCATTGCGCTT
GTCCACGCCAGCAGGGAGGGTCTCGCCAGCCTATCGGTCTCCATCGGGTATCAACACCTGGCCCCGCCAAGCGAC
GACGCAATTGTCCCCATCTCCCCCCTCCTTTGTCGATTTGCCAATGGGCGCGGCCGCCGCCAATCGACCATTGAG
GCGCCATTCAATGAACCTTGGCCGACTCTCTTGACTCATCGCCGCGCTTCACCAAGCCGCCCGGACAATTACTTC
TGGGCCCCACCGCCATCCGAACAAGCTACTGCCCTTTACCCAGAGCCAGCCGGTCCTTGTTCCGCCCCCATCGCG
GCGGCGGCCAGACATCGAGCGAAGCCGCGCGCCCTGTCCAACCTTTTCCCTCTTTTCTTTCTCCGCCTGCCCCGT
CCTTGA
Transcript >Hirsu2|1078
ATGCACCCCACCGCATCCTATGCCCCTCCTCCCATGACACGCCCCTCCCGCGCACTCCTGCACCCTCTCTCCCCT
CTGTTCTATCAGGCAATCCTCTGTCGCCATCAGCGTCCTCACTCTCCTCCTCTTCATCCTCCTCCTCCTCCTCCC
CCTCCTCGCTCCTCGCCTCCTTCGCAGCTCTCCTCCTCCTCGACCGACGCAGAACCGACCGGCTCGACAACGACG
ACTAGTAGCGACGCCCCCCTCCGTCTCGCTTCCGTTGCCCAACCGTCTCTTATCATCTTCTTGGGTCGCGCTTCC
TATTTCCACTCAGTGGCCTGCGCCTATCCCCTCCCCCGCTCTCTGTGTCTTCTCTTCCTCGGTCTTCTCCATCTT
GTCTCTCGTCTTCCCTCTCTTCGCCTTCATCCTCCTTCTCCTGGTCCGCCTTTGCCCGTCCTCCTCGCTCGCTCG
CCACAGTCCCGACTTGCTCGAGGTCGACTACGACGTCCCCCCCCCAAACGACGAGACAAGCCGATAAAAGACGAG
CCGGCCGCGGCTCTTGTGCTCTGCCTCACTCACACACTCTCTTCCTCTCCTCTCCGTAACCTGCCGTCAGCTACT
CCAGCAGCCGGACAGCAGGGCCTCTCTCTCGGCCTGCTGACCCAATCACAGCCGTCCTCGATCCGTCGCTCGCCT
TGTCCTCGCGGGGGCGTGTGCGCGCTCGCGTGTGTGCCTGCGTCAGGCCTCGCTGTGGCCCGCCGCATTGCGCTT
GTCCACGCCAGCAGGGAGGGTCTCGCCAGCCTATCGGTCTCCATCGGGTATCAACACCTGGCCCCGCCAAGCGAC
GACGCAATTGTCCCCATCTCCCCCCTCCTTTGTCGATTTGCCAATGGGCGCGGCCGCCGCCAATCGACCATTGAG
GCGCCATTCAATGAACCTTGGCCGACTCTCTTGACTCATCGCCGCGCTTCACCAAGCCGCCCGGACAATTACTTC
TGGGCCCCACCGCCATCCGAACAAGCTACTGCCCTTTACCCAGAGCCAGCCGGTCCTTGTTCCGCCCCCATCGCG
GCGGCGGCCAGACATCGAGCGAAGCCGCGCGCCCTGTCCAACCTTTTCCCTCTTTTCTTTCTCCGCCTGCCCCGT
CCTTGA
Gene >Hirsu2|1078
ATGCACCCCACCGCATCCTATGCCCCTCCTCCCATGACACGCCCCTCCCGCGCACTCCTGCACCCTCTCTCCCCT
CTGTTCTATCAGGCAATCCTCTGTCGCCATCAGCGTCCTCACTCTCCTCCTCTTCATCCTCCTCCTCCTCCTCCC
CCTCCTCGCTCCTCGCCTCCTTCGCAGCTCTCCTCCTCCTCGACCGACGCAGAACCGACCGGCTCGACAACGACG
ACTAGTAGCGACGCCCCCCTCCGTCTCGCTTCCGTTGCCCAACCGTCTCTTATCATCTTCTTGGGTCGCGCTTCC
TATTTCCACTCAGTGGCCTGCGCCTATCCCCTCCCCCGCTCTCTGTGTCTTCTCTTCCTCGGTCTTCTCCATCTT
GTCTCTCGTCTTCCCTCTCTTCGCCTTCATCCTCCTTCTCCTGGTCCGCCTTTGCCCGTCCTCCTCGCTCGCTCG
CCACAGTGTGCGTGCGCGCTGCCATCGACCAATTCGCCGACCAATTGCCATCGACTCGTCCGTCTCGGAAGCCCG
ACTTGCTCGAGGTCGACTACGACGTCCCCCCCCCAAACGACGAGACAAGCCGATAAAAGACGAGCCGGCCGCGGC
TCTTGTGCTCTGCCTCACTCACACACTCTCTTCCTCTCCTCTCCGTAACCTGCCGTCAGCTACTCCAGCAGCCGG
ACAGCAGGGCCTCTCTCTCGGCCTGCTGACCCAATCACAGCCGTCCTCGATCCGTCGCTCGCCTTGTCCTCGCGG
GGGCGTGTGCGCGCTCGCGTGTGTGCCTGCGTCAGGCCTCGCTGTGGCCCGCCGCATTGCGCTTGTCCACGCCAG
CAGGGAGGGTCTCGCCAGCCTATCGGTCTCCATCGGGTATCAACACCTGGCGTACGTGCGTGTCAGATCACAGTC
ATCAGCCATTCGATTTGTACAAAAGGCAAAATAGCCCGCCAAGCGACGACGCAATTGTCCCCATCTCCCCCCTCC
TTTGTCGATTTGCCAATGGGCGCGGCCGCCGCCAATCGACCATTGAGGCGCCATTCAATGAACCTTGGCCGACTC
TCTTGACTCATCGCCGCGCTTCACCAAGCCGCCCGGACAATTACTTCTGGGCCCCACCGCCATCCGAACAAGCTA
CTGCCCTTTACCCAGAGCCAGCCGGTCCTTGTTCCGCCCCCATCGCGGCGGCGGCCAGACATCGAGCGAAGCCGC
GCGCCCTGTCCAACCTTTTCCCTCTTTTCTTTCTCCGCCTGCCCCGTCCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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