© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10771 |
| Gene name | |
| Location | Contig_90:8419..9437 |
| Strand | + |
| Gene length (bp) | 1018 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01027 | Bax1-I | Inhibitor of apoptosis-promoting Bax1 | 2.7E-53 | 68 | 269 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74888|BXI1_SCHPO | Bax inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bxi1 PE=3 SV=1 | 5 | 275 | 5.0E-54 |
| sp|Q49P94|GAAP_VACCL | Golgi anti-apoptotic protein OS=Vaccinia virus (strain Lister) GN=L6 PE=1 SV=1 | 41 | 260 | 2.0E-48 |
| sp|Q9DA39|LFG4_MOUSE | Protein lifeguard 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1 | 40 | 275 | 5.0E-48 |
| sp|Q9HC24|LFG4_HUMAN | Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=3 | 42 | 275 | 1.0E-45 |
| sp|P48558|BXI1_YEAST | Bax inhibitor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BXI1 PE=1 SV=1 | 24 | 275 | 3.0E-38 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74888|BXI1_SCHPO | Bax inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bxi1 PE=3 SV=1 | 5 | 275 | 5.0E-54 |
| sp|Q49P94|GAAP_VACCL | Golgi anti-apoptotic protein OS=Vaccinia virus (strain Lister) GN=L6 PE=1 SV=1 | 41 | 260 | 2.0E-48 |
| sp|Q9DA39|LFG4_MOUSE | Protein lifeguard 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1 | 40 | 275 | 5.0E-48 |
| sp|Q9HC24|LFG4_HUMAN | Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=3 | 42 | 275 | 1.0E-45 |
| sp|P48558|BXI1_YEAST | Bax inhibitor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BXI1 PE=1 SV=1 | 24 | 275 | 3.0E-38 |
| sp|Q1LZ71|LFG2_BOVIN | Protein lifeguard 2 OS=Bos taurus GN=FAIM2 PE=2 SV=1 | 9 | 270 | 7.0E-32 |
| sp|Q94A20|BI1L_ARATH | BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1 | 24 | 274 | 8.0E-32 |
| sp|Q6P6R0|LFG1_RAT | Protein lifeguard 1 OS=Rattus norvegicus GN=Grina PE=2 SV=1 | 65 | 270 | 9.0E-31 |
| sp|Q7Z429|LFG1_HUMAN | Protein lifeguard 1 OS=Homo sapiens GN=GRINA PE=2 SV=1 | 65 | 270 | 1.0E-30 |
| sp|Q9ESF4|LFG1_MOUSE | Protein lifeguard 1 OS=Mus musculus GN=Grina PE=2 SV=1 | 65 | 270 | 3.0E-30 |
| sp|Q9BWQ8|LFG2_HUMAN | Protein lifeguard 2 OS=Homo sapiens GN=FAIM2 PE=1 SV=1 | 9 | 270 | 4.0E-30 |
| sp|Q8K097|LFG2_MOUSE | Protein lifeguard 2 OS=Mus musculus GN=Faim2 PE=2 SV=1 | 65 | 270 | 2.0E-29 |
| sp|Q5R4I4|LFG2_PONAB | Protein lifeguard 2 OS=Pongo abelii GN=FAIM2 PE=2 SV=1 | 9 | 270 | 4.0E-29 |
| sp|O88407|LFG2_RAT | Protein lifeguard 2 OS=Rattus norvegicus GN=Faim2 PE=2 SV=1 | 65 | 270 | 2.0E-28 |
| sp|Q32L53|LFG1_BOVIN | Protein lifeguard 1 OS=Bos taurus GN=GRINA PE=2 SV=1 | 65 | 270 | 3.0E-28 |
| sp|Q969X1|LFG3_HUMAN | Protein lifeguard 3 OS=Homo sapiens GN=TMBIM1 PE=1 SV=2 | 65 | 273 | 1.0E-23 |
| sp|Q11080|TMBI4_CAEEL | Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=3 SV=2 | 57 | 269 | 3.0E-23 |
| sp|Q8BJZ3|LFG3_MOUSE | Protein lifeguard 3 OS=Mus musculus GN=Tmbim1 PE=1 SV=1 | 65 | 272 | 8.0E-21 |
| sp|Q9PIQ8|Y236_CAMJE | Uncharacterized protein Cj0236c OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=Cj0236c PE=3 SV=1 | 70 | 269 | 2.0E-16 |
| sp|Q9A1B9|Y358_STRP1 | Uncharacterized membrane protein SPy_0358/M5005_Spy0301 OS=Streptococcus pyogenes serotype M1 GN=SPy_0358 PE=3 SV=1 | 68 | 268 | 1.0E-12 |
| sp|Q8P2D4|Y408_STRP8 | Uncharacterized membrane protein spyM18_0408 OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=spyM18_0408 PE=3 SV=1 | 68 | 268 | 2.0E-12 |
| sp|Q5XDQ1|Y327_STRP6 | Uncharacterized membrane protein M6_Spy0327 OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=M6_Spy0327 PE=3 SV=1 | 68 | 268 | 2.0E-12 |
| sp|P0DA11|Y260_STRPQ | Uncharacterized membrane protein SPs1599 OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=SPs1599 PE=3 SV=1 | 68 | 268 | 3.0E-12 |
| sp|P0DA10|Y260_STRP3 | Uncharacterized membrane protein SpyM3_0260 OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=SpyM3_0260 PE=3 SV=1 | 68 | 268 | 3.0E-12 |
| sp|O51489|Y539_BORBU | Uncharacterized protein BB_0539 OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=BB_0539 PE=3 SV=1 | 66 | 275 | 5.0E-12 |
| sp|Q9KSA1|Y1358_VIBCH | Uncharacterized membrane protein VC_1358 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1358 PE=3 SV=1 | 159 | 275 | 2.0E-11 |
| sp|Q9ZKT1|Y920_HELPJ | Uncharacterized protein jhp_0854 OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=jhp_0854 PE=3 SV=1 | 103 | 270 | 3.0E-10 |
| sp|O25578|Y920_HELPY | Uncharacterized protein HP_0920 OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=HP_0920 PE=3 SV=1 | 103 | 270 | 1.0E-09 |
| sp|O31539|YETJ_BACSU | Uncharacterized protein YetJ OS=Bacillus subtilis (strain 168) GN=yetJ PE=1 SV=1 | 122 | 275 | 4.0E-09 |
| sp|P09723|US21_HCMVA | Uncharacterized protein HWLF2 OS=Human cytomegalovirus (strain AD169) GN=US21 PE=3 SV=1 | 67 | 275 | 1.0E-07 |
| sp|F5HHT6|US21_HCMVM | Membrane protein US21 OS=Human cytomegalovirus (strain Merlin) GN=US21 PE=3 SV=1 | 67 | 275 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 108 | 125 | 17 |
| 2 | 130 | 152 | 22 |
| 3 | 159 | 178 | 19 |
| 4 | 188 | 210 | 22 |
| 5 | 217 | 239 | 22 |
| 6 | 249 | 271 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10771 MASNARYQPAPQQEPADDDYTRAPPAYAAAARDETQGLFGPPRSSEDNLPDDFKFGGSVAEATVDIRNQFIRKVY TILTVQLLATAGVSAATFFSDSYRGWIQAHPALVWVSLIGSLVFMGLTYWKRKSYPTNLLFLSLFTLAEAYTISV IVSFYRTSVVLNAVVLTAGIFVFLTAFACQSRYDFTSWMPYLFGALWGLVLFGLIAAFLPRNSTVDLIYGGIAAL IFSAYILVDTQLVIRKHHVEEEIAAAISLYLDIINLFLAILRILNGQSNN* |
| Coding | >Hirsu2|10771 ATGGCGTCCAACGCAAGGTACCAGCCCGCGCCGCAGCAGGAGCCGGCCGACGACGACTACACGCGCGCGCCGCCC GCCTACGCCGCCGCCGCCCGCGACGAGACGCAGGGCCTGTTCGGCCCGCCGCGCAGCAGCGAGGACAACCTGCCG GACGACTTCAAGTTCGGCGGCTCGGTGGCAGAGGCGACGGTCGACATCCGCAACCAGTTCATCCGCAAGGTCTAC ACCATCCTAACGGTGCAGCTTCTGGCCACGGCCGGCGTCAGCGCGGCCACCTTCTTCAGCGACTCGTACCGCGGC TGGATCCAGGCCCATCCGGCCCTCGTCTGGGTCTCGCTCATCGGCTCCCTCGTCTTCATGGGCCTGACGTACTGG AAGCGCAAGTCGTACCCGACCAACCTGCTCTTCCTCTCGCTCTTCACCCTGGCCGAGGCCTACACCATCTCCGTC ATCGTCTCCTTCTACCGCACCTCGGTCGTCCTCAACGCCGTCGTCCTGACGGCCGGCATCTTCGTCTTCCTCACC GCCTTCGCCTGCCAGTCCCGCTACGACTTCACCTCGTGGATGCCCTACCTCTTCGGCGCCCTCTGGGGCCTCGTC CTTTTCGGCCTCATCGCCGCCTTCCTGCCCCGCAACTCCACTGTCGACCTCATCTACGGCGGCATCGCCGCCCTC ATCTTCAGCGCCTACATCCTCGTCGACACCCAGCTCGTCATCCGCAAGCACCACGTCGAGGAGGAGATCGCCGCC GCCATCAGCCTCTACCTCGACATCATCAACCTCTTCCTCGCCATCCTGCGCATTCTCAACGGCCAGTCCAACAAC TAG |
| Transcript | >Hirsu2|10771 ATGGCGTCCAACGCAAGGTACCAGCCCGCGCCGCAGCAGGAGCCGGCCGACGACGACTACACGCGCGCGCCGCCC GCCTACGCCGCCGCCGCCCGCGACGAGACGCAGGGCCTGTTCGGCCCGCCGCGCAGCAGCGAGGACAACCTGCCG GACGACTTCAAGTTCGGCGGCTCGGTGGCAGAGGCGACGGTCGACATCCGCAACCAGTTCATCCGCAAGGTCTAC ACCATCCTAACGGTGCAGCTTCTGGCCACGGCCGGCGTCAGCGCGGCCACCTTCTTCAGCGACTCGTACCGCGGC TGGATCCAGGCCCATCCGGCCCTCGTCTGGGTCTCGCTCATCGGCTCCCTCGTCTTCATGGGCCTGACGTACTGG AAGCGCAAGTCGTACCCGACCAACCTGCTCTTCCTCTCGCTCTTCACCCTGGCCGAGGCCTACACCATCTCCGTC ATCGTCTCCTTCTACCGCACCTCGGTCGTCCTCAACGCCGTCGTCCTGACGGCCGGCATCTTCGTCTTCCTCACC GCCTTCGCCTGCCAGTCCCGCTACGACTTCACCTCGTGGATGCCCTACCTCTTCGGCGCCCTCTGGGGCCTCGTC CTTTTCGGCCTCATCGCCGCCTTCCTGCCCCGCAACTCCACTGTCGACCTCATCTACGGCGGCATCGCCGCCCTC ATCTTCAGCGCCTACATCCTCGTCGACACCCAGCTCGTCATCCGCAAGCACCACGTCGAGGAGGAGATCGCCGCC GCCATCAGCCTCTACCTCGACATCATCAACCTCTTCCTCGCCATCCTGCGCATTCTCAACGGCCAGTCCAACAAC TAG |
| Gene | >Hirsu2|10771 ATGGCGTCCAACGCAAGGTACCAGCCCGCGCCGCAGCAGGAGCCGGCCGACGACGACTACACGCGCGCGCCGCCC GCCTACGCCGCCGCCGCCCGCGACGAGACGCAGGGCCTGTTCGGCCCGCCGCGCAGCAGCGAGGACAACCTGCCG GACGACTTCAAGGTGAGAGGGAAGATGCCCGGATAAGCTGAGGGGGGAAATATGGGCGTGTTGCGTTGGGGGGAG CGCAACTTGTGTGAGTGTGTTGCGCGCAAAGATAGCTGCTGACGCGGGCGACAGTTCGGCGGCTCGGTGGCAGAG GCGACGGTCGACATCCGCAACCAGTTCATCCGCAAGGTCTACACCATCCTAACGGTGCAGCTTCTGGCCACGGCC GGCGTCAGCGCGGCCACCTTCTTCAGCGACTCGTACCGCGGCTGGATCCAGGCCCATCCGGCCCTCGTCTGGGTC TCGGTGAGGCCAAGCTGCCCCTCCCCCTTTCGGTGTGACGAGGCGGATCGTATGTCGTGCTGACGGGGCGCTCTA GCTCATCGGCTCCCTCGTCTTCATGGGCCTGACGTACTGGAAGCGCAAGTCGTACCCGACCAACCTGCTCTTCCT CTCGCTCTTCACCCTGGCCGAGGCCTACACCATCTCCGTCATCGTCTCCTTCTACCGCACCTCGGTCGTCCTCAA CGCCGTCGTCCTGACGGCCGGCATCTTCGTCTTCCTCACCGCCTTCGCCTGCCAGTCCCGCTACGACTTCACCTC GTGGATGCCCTACCTCTTCGGCGCCCTCTGGGGCCTCGTCCTTTTCGGCCTCATCGCCGCCTTCCTGCCCCGCAA CTCCACTGTCGACCTCATCTACGGCGGCATCGCCGCCCTCATCTTCAGCGCCTACATCCTCGTCGACACCCAGCT CGTCATCCGCAAGCACCACGTCGAGGAGGAGATCGCCGCCGCCATCAGCCTCTACCTCGACATCATCAACCTCTT CCTCGCCATCCTGCGCATTCTCAACGGCCAGTCCAACAACTAG |