Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1077
Gene name
LocationContig_1222:3549..4662
Strand-
Gene length (bp)1113
Transcript length (bp)1113
Coding sequence length (bp)1113
Protein length (aa) 371

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04433 SWIRM SWIRM domain 4.7E-13 290 362

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28003|FUN19_YEAST SWIRM domain-containing protein FUN19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUN19 PE=1 SV=3 253 370 4.0E-32
sp|Q99326|YO338_YEAST SWIRM domain-containing protein YOR338W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR338W PE=1 SV=1 253 361 7.0E-32
sp|O13719|LAF1_SCHPO SWIRM domain-containing protein laf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=laf1 PE=1 SV=1 145 362 3.0E-31
sp|O74443|LAF2_SCHPO SWIRM domain-containing protein laf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=laf2 PE=1 SV=1 253 362 5.0E-30
sp|Q59WH0|ADA2_CANAL Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADA2 PE=3 SV=1 281 360 2.0E-06

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3505 0.8894 0.0136 0.0453 0.1074 0.0081 0.0204 0.0301 0.0211 0.0061

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1357
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6425
Ophiocordyceps australis map64 (Brazil) OphauB2|2058
Ophiocordyceps camponoti-floridani Ophcf2|02950
Ophiocordyceps camponoti-rufipedis Ophun1|7476
Ophiocordyceps kimflemingae Ophio5|494
Ophiocordyceps subramaniannii Hirsu2|1077 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1077
MEAKKLDINSLMSPPDALIDSFAHHHHHHAMSSGKGTGTGKAGDADFCPASSAQHPLPMSPPVSPYSKPATTSTS
PPSSQQTAVVVKDPVLYPVDDHSPSSPMQQPLFAPAELEHRRIVDEHVRARPQSIFAGLAPPRREDYELVLTFRS
QVMRHFTADRKAWLRKERALLEADRRAGAQRYHAIMPAKPVVAKSARSSRAERVTKGQGAPRQIRNHAAATGPAR
PARPAGRVSATPEPSRRIVAPNREDKDFEALPNYCPPTASLPNRPNSLKVDWKGQPIDLSNDANAHLLHPDEVTL
AGNLRLDCATYLTSKRRIFDRRLQCLRMGKEFRKTDAQQACKIDVNKASKLWTAFEKVGWLDASWMRDFV*
Coding >Hirsu2|1077
ATGGAAGCCAAGAAGCTCGACATCAACAGCCTCATGTCCCCCCCCGACGCACTCATCGACAGCTTCGCCCACCAC
CACCACCACCACGCCATGAGCAGCGGCAAGGGCACGGGCACGGGCAAGGCGGGCGACGCCGACTTCTGCCCGGCG
TCGTCGGCCCAGCACCCGCTGCCCATGTCGCCGCCCGTCTCGCCCTACAGCAAGCCGGCAACGACGTCGACGTCG
CCGCCGTCGAGCCAGCAGACGGCCGTCGTCGTCAAGGACCCGGTCCTGTACCCCGTCGACGACCACTCGCCGTCG
AGCCCGATGCAGCAGCCGCTCTTCGCCCCGGCCGAGCTCGAGCACCGGCGCATCGTCGACGAGCACGTGCGGGCG
CGGCCGCAGAGCATCTTCGCCGGCCTCGCACCCCCCCGACGCGAGGACTACGAGCTCGTCCTCACCTTCCGGTCG
CAGGTGATGAGGCACTTCACCGCCGACCGCAAGGCCTGGCTGCGCAAGGAGCGGGCTCTCCTCGAGGCAGACAGG
CGGGCCGGCGCCCAGCGATACCATGCCATCATGCCGGCCAAGCCCGTTGTGGCCAAGTCCGCCCGGTCGTCGCGT
GCCGAGCGAGTGACCAAGGGCCAGGGTGCCCCACGGCAGATCCGCAACCATGCCGCAGCCACGGGGCCTGCGAGA
CCAGCGAGACCCGCCGGCCGTGTTAGCGCCACGCCCGAGCCGTCGCGGCGGATCGTCGCGCCCAATCGCGAGGAC
AAGGACTTCGAGGCGCTGCCCAACTACTGCCCGCCCACGGCCTCGCTCCCCAACCGCCCCAACAGCCTCAAGGTG
GACTGGAAGGGCCAGCCGATCGACCTGAGCAACGACGCCAACGCCCACCTGCTGCACCCGGACGAGGTGACGCTG
GCCGGCAACCTCCGCCTCGACTGCGCCACGTACCTGACGAGCAAGCGGCGCATCTTCGACCGCCGCCTTCAGTGC
CTCCGCATGGGCAAGGAGTTCCGCAAGACGGACGCACAGCAGGCGTGCAAGATTGACGTCAACAAGGCCTCGAAG
CTGTGGACAGCCTTTGAGAAGGTGGGCTGGCTCGACGCCAGCTGGATGCGCGACTTTGTCTGA
Transcript >Hirsu2|1077
ATGGAAGCCAAGAAGCTCGACATCAACAGCCTCATGTCCCCCCCCGACGCACTCATCGACAGCTTCGCCCACCAC
CACCACCACCACGCCATGAGCAGCGGCAAGGGCACGGGCACGGGCAAGGCGGGCGACGCCGACTTCTGCCCGGCG
TCGTCGGCCCAGCACCCGCTGCCCATGTCGCCGCCCGTCTCGCCCTACAGCAAGCCGGCAACGACGTCGACGTCG
CCGCCGTCGAGCCAGCAGACGGCCGTCGTCGTCAAGGACCCGGTCCTGTACCCCGTCGACGACCACTCGCCGTCG
AGCCCGATGCAGCAGCCGCTCTTCGCCCCGGCCGAGCTCGAGCACCGGCGCATCGTCGACGAGCACGTGCGGGCG
CGGCCGCAGAGCATCTTCGCCGGCCTCGCACCCCCCCGACGCGAGGACTACGAGCTCGTCCTCACCTTCCGGTCG
CAGGTGATGAGGCACTTCACCGCCGACCGCAAGGCCTGGCTGCGCAAGGAGCGGGCTCTCCTCGAGGCAGACAGG
CGGGCCGGCGCCCAGCGATACCATGCCATCATGCCGGCCAAGCCCGTTGTGGCCAAGTCCGCCCGGTCGTCGCGT
GCCGAGCGAGTGACCAAGGGCCAGGGTGCCCCACGGCAGATCCGCAACCATGCCGCAGCCACGGGGCCTGCGAGA
CCAGCGAGACCCGCCGGCCGTGTTAGCGCCACGCCCGAGCCGTCGCGGCGGATCGTCGCGCCCAATCGCGAGGAC
AAGGACTTCGAGGCGCTGCCCAACTACTGCCCGCCCACGGCCTCGCTCCCCAACCGCCCCAACAGCCTCAAGGTG
GACTGGAAGGGCCAGCCGATCGACCTGAGCAACGACGCCAACGCCCACCTGCTGCACCCGGACGAGGTGACGCTG
GCCGGCAACCTCCGCCTCGACTGCGCCACGTACCTGACGAGCAAGCGGCGCATCTTCGACCGCCGCCTTCAGTGC
CTCCGCATGGGCAAGGAGTTCCGCAAGACGGACGCACAGCAGGCGTGCAAGATTGACGTCAACAAGGCCTCGAAG
CTGTGGACAGCCTTTGAGAAGGTGGGCTGGCTCGACGCCAGCTGGATGCGCGACTTTGTCTGA
Gene >Hirsu2|1077
ATGGAAGCCAAGAAGCTCGACATCAACAGCCTCATGTCCCCCCCCGACGCACTCATCGACAGCTTCGCCCACCAC
CACCACCACCACGCCATGAGCAGCGGCAAGGGCACGGGCACGGGCAAGGCGGGCGACGCCGACTTCTGCCCGGCG
TCGTCGGCCCAGCACCCGCTGCCCATGTCGCCGCCCGTCTCGCCCTACAGCAAGCCGGCAACGACGTCGACGTCG
CCGCCGTCGAGCCAGCAGACGGCCGTCGTCGTCAAGGACCCGGTCCTGTACCCCGTCGACGACCACTCGCCGTCG
AGCCCGATGCAGCAGCCGCTCTTCGCCCCGGCCGAGCTCGAGCACCGGCGCATCGTCGACGAGCACGTGCGGGCG
CGGCCGCAGAGCATCTTCGCCGGCCTCGCACCCCCCCGACGCGAGGACTACGAGCTCGTCCTCACCTTCCGGTCG
CAGGTGATGAGGCACTTCACCGCCGACCGCAAGGCCTGGCTGCGCAAGGAGCGGGCTCTCCTCGAGGCAGACAGG
CGGGCCGGCGCCCAGCGATACCATGCCATCATGCCGGCCAAGCCCGTTGTGGCCAAGTCCGCCCGGTCGTCGCGT
GCCGAGCGAGTGACCAAGGGCCAGGGTGCCCCACGGCAGATCCGCAACCATGCCGCAGCCACGGGGCCTGCGAGA
CCAGCGAGACCCGCCGGCCGTGTTAGCGCCACGCCCGAGCCGTCGCGGCGGATCGTCGCGCCCAATCGCGAGGAC
AAGGACTTCGAGGCGCTGCCCAACTACTGCCCGCCCACGGCCTCGCTCCCCAACCGCCCCAACAGCCTCAAGGTG
GACTGGAAGGGCCAGCCGATCGACCTGAGCAACGACGCCAACGCCCACCTGCTGCACCCGGACGAGGTGACGCTG
GCCGGCAACCTCCGCCTCGACTGCGCCACGTACCTGACGAGCAAGCGGCGCATCTTCGACCGCCGCCTTCAGTGC
CTCCGCATGGGCAAGGAGTTCCGCAAGACGGACGCACAGCAGGCGTGCAAGATTGACGTCAACAAGGCCTCGAAG
CTGTGGACAGCCTTTGAGAAGGTGGGCTGGCTCGACGCCAGCTGGATGCGCGACTTTGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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