Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10761
Gene name
LocationContig_9:61937..63980
Strand+
Gene length (bp)2043
Transcript length (bp)1989
Coding sequence length (bp)1989
Protein length (aa) 663

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03343 SART-1 SART-1 family 1.8E-177 4 626

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94538|SNU66_SCHPO U4/U6.U5 tri-snRNP-associated protein snu66 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=snu66 PE=1 SV=1 311 635 1.0E-42
sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 3 290 9.0E-15
sp|Q5XIW8|SNUT1_RAT U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus GN=Sart1 PE=1 SV=1 5 290 2.0E-14
sp|Q9Z315|SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus GN=Sart1 PE=1 SV=1 5 290 1.0E-13
sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 577 641 1.0E-12
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O94538|SNU66_SCHPO U4/U6.U5 tri-snRNP-associated protein snu66 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=snu66 PE=1 SV=1 311 635 1.0E-42
sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 3 290 9.0E-15
sp|Q5XIW8|SNUT1_RAT U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus GN=Sart1 PE=1 SV=1 5 290 2.0E-14
sp|Q9Z315|SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus GN=Sart1 PE=1 SV=1 5 290 1.0E-13
sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 577 641 1.0E-12
sp|Q5XIW8|SNUT1_RAT U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus GN=Sart1 PE=1 SV=1 577 641 1.0E-12
sp|Q9Z315|SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus GN=Sart1 PE=1 SV=1 577 641 2.0E-12
sp|Q9LFE0|DOT2_ARATH SART-1 family protein DOT2 OS=Arabidopsis thaliana GN=DOT2 PE=1 SV=1 580 626 3.0E-07
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GO

GO Term Description Terminal node
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0044237 cellular metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0046483 heterocycle metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0016070 RNA metabolic process No
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0006397 mRNA processing No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0008380 RNA splicing No
GO:0006396 RNA processing No
GO:0016071 mRNA metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
SART1

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10761
MDAATIQETNRIRLSLGMKPLPVPGAQPSQQTNRRDASDSDDDTEAASTLETRQAQAYDNYKSHLEAEAAKKRRE
AKSAAIRKAREAAQRFAVLEGKGLGEPEESGEVDAKSWLTGQKKRQKKIEKTRKLEEELAAAEAAAAEAVQYTSK
DLAGIKVSHDTTAFAEGDEQILTLKDATIEEYEEAGDELENINIREGEKLTDRLELKKKRPGYNPQDDEIGGRSI
LSQYDDEIFGKKSKKFTLDADGAIAELSDILDQPVQKTNKLQNISLDDIVGDTPTSSDYLAASEIKVKKPKKKKG
KGTRQKPHDEDDIIPTEAGSSAMEVDTSGQVANRKRKAVTEAFVDDDDLQSSLAIQRKDALKKRKRIRPEDFAKQ
LKEQAEGKGDEESEDESQQGLVIGEISEFVATLSKHDDDEQSRLKRQQRAATRQAAEPDTHDPDQQDQPMDDAPI
LESGATSHVDEDAATGGAEDNNLDEEKTVGESMGATLALLRERGLIEKSRGDLSHQSNRERQEFLKRKLQLEEEL
DEKARQARERDRASGKLERMSRADREEYARQQNAWRDHQHARKMAELISSTYKPNVELKYTDEHGRRLDRKEAFK
HLSHQFHGKGSGKGKTEKKLKQIEEEKRREAQSLFDASQGSGMNAATTQQTKKRNEAGVRLG*
Coding >Hirsu2|10761
ATGGATGCCGCAACTATTCAAGAGACCAACCGCATCCGGTTGTCTCTGGGCATGAAGCCGCTGCCCGTCCCTGGA
GCCCAACCCTCACAGCAGACAAACCGACGAGATGCCTCTGACAGCGATGACGATACCGAAGCTGCAAGCACATTG
GAAACACGACAGGCTCAGGCCTACGATAACTATAAAAGTCACCTGGAAGCCGAGGCCGCGAAAAAGAGACGAGAA
GCAAAGTCCGCTGCCATTCGAAAGGCCCGCGAGGCCGCCCAGCGCTTCGCCGTTCTCGAAGGCAAGGGACTAGGC
GAGCCTGAAGAGAGTGGCGAGGTTGATGCAAAGTCGTGGTTAACAGGGCAGAAGAAGCGTCAGAAGAAGATTGAA
AAGACCAGAAAGCTGGAGGAAGAGCTGGCGGCGGCAGAAGCGGCGGCGGCAGAAGCTGTCCAGTATACCTCCAAG
GATCTTGCGGGCATCAAAGTTTCGCACGACACCACCGCATTTGCAGAAGGAGATGAGCAGATTCTCACCCTCAAG
GACGCCACCATCGAAGAGTACGAGGAAGCGGGCGATGAGCTGGAAAATATCAACATCCGAGAGGGCGAGAAACTC
ACGGACAGACTAGAGCTGAAGAAGAAGCGGCCGGGCTATAATCCCCAAGACGATGAGATTGGAGGGCGCAGTATT
TTATCTCAGTACGATGATGAAATCTTCGGCAAGAAGTCGAAGAAGTTCACACTGGATGCGGATGGGGCCATCGCG
GAATTATCCGATATACTGGATCAACCAGTTCAAAAGACGAACAAACTACAGAACATCAGTTTGGACGATATCGTC
GGCGATACCCCTACTTCTTCCGACTACCTAGCGGCTTCTGAAATCAAAGTCAAGAAGCCGAAGAAGAAGAAGGGA
AAGGGCACGAGGCAGAAACCGCATGACGAAGACGATATCATCCCCACCGAAGCGGGTAGCAGTGCAATGGAGGTA
GACACAAGCGGCCAGGTCGCCAACAGAAAGCGGAAAGCAGTTACGGAGGCATTCGTCGACGACGACGACCTACAG
TCATCGCTCGCGATTCAGCGGAAAGACGCTCTCAAGAAGCGCAAAAGGATCCGTCCAGAAGACTTCGCAAAACAA
CTCAAAGAGCAAGCTGAGGGGAAAGGAGACGAGGAAAGCGAAGACGAGAGCCAACAGGGCCTTGTCATCGGAGAG
ATATCGGAATTTGTAGCTACCCTCAGCAAACATGACGACGACGAACAGTCGAGGCTCAAACGACAACAAAGGGCG
GCAACAAGGCAAGCTGCGGAACCGGACACGCATGACCCAGACCAGCAAGACCAGCCAATGGACGATGCCCCCATC
CTCGAAAGCGGTGCCACGTCGCACGTCGACGAAGATGCGGCGACTGGCGGCGCCGAGGACAACAATCTCGACGAG
GAAAAAACAGTCGGTGAGAGCATGGGTGCAACCCTCGCCTTGCTTCGGGAGCGAGGTTTGATAGAGAAGTCGCGT
GGCGATCTCTCCCACCAAAGCAACCGAGAGCGACAAGAGTTCCTCAAGCGAAAGCTACAGCTTGAGGAAGAACTA
GACGAGAAGGCACGGCAGGCGCGAGAGCGGGACCGGGCGAGCGGCAAGTTGGAGCGCATGTCAAGGGCCGACAGG
GAAGAATACGCCAGGCAGCAGAACGCGTGGCGCGACCACCAGCACGCGCGCAAGATGGCCGAGCTCATCTCGTCC
ACCTACAAGCCCAACGTCGAACTGAAGTACACGGACGAGCACGGCCGGCGGCTCGACCGGAAGGAAGCCTTTAAG
CACCTGAGCCACCAATTCCACGGAAAGGGCAGCGGAAAGGGGAAGACGGAAAAGAAACTCAAGCAGATTGAAGAG
GAGAAGCGGCGCGAGGCTCAGAGTCTCTTCGACGCCAGCCAGGGCAGCGGCATGAACGCAGCCACGACGCAGCAG
ACCAAGAAGCGCAATGAGGCGGGCGTCCGTCTCGGATGA
Transcript >Hirsu2|10761
ATGGATGCCGCAACTATTCAAGAGACCAACCGCATCCGGTTGTCTCTGGGCATGAAGCCGCTGCCCGTCCCTGGA
GCCCAACCCTCACAGCAGACAAACCGACGAGATGCCTCTGACAGCGATGACGATACCGAAGCTGCAAGCACATTG
GAAACACGACAGGCTCAGGCCTACGATAACTATAAAAGTCACCTGGAAGCCGAGGCCGCGAAAAAGAGACGAGAA
GCAAAGTCCGCTGCCATTCGAAAGGCCCGCGAGGCCGCCCAGCGCTTCGCCGTTCTCGAAGGCAAGGGACTAGGC
GAGCCTGAAGAGAGTGGCGAGGTTGATGCAAAGTCGTGGTTAACAGGGCAGAAGAAGCGTCAGAAGAAGATTGAA
AAGACCAGAAAGCTGGAGGAAGAGCTGGCGGCGGCAGAAGCGGCGGCGGCAGAAGCTGTCCAGTATACCTCCAAG
GATCTTGCGGGCATCAAAGTTTCGCACGACACCACCGCATTTGCAGAAGGAGATGAGCAGATTCTCACCCTCAAG
GACGCCACCATCGAAGAGTACGAGGAAGCGGGCGATGAGCTGGAAAATATCAACATCCGAGAGGGCGAGAAACTC
ACGGACAGACTAGAGCTGAAGAAGAAGCGGCCGGGCTATAATCCCCAAGACGATGAGATTGGAGGGCGCAGTATT
TTATCTCAGTACGATGATGAAATCTTCGGCAAGAAGTCGAAGAAGTTCACACTGGATGCGGATGGGGCCATCGCG
GAATTATCCGATATACTGGATCAACCAGTTCAAAAGACGAACAAACTACAGAACATCAGTTTGGACGATATCGTC
GGCGATACCCCTACTTCTTCCGACTACCTAGCGGCTTCTGAAATCAAAGTCAAGAAGCCGAAGAAGAAGAAGGGA
AAGGGCACGAGGCAGAAACCGCATGACGAAGACGATATCATCCCCACCGAAGCGGGTAGCAGTGCAATGGAGGTA
GACACAAGCGGCCAGGTCGCCAACAGAAAGCGGAAAGCAGTTACGGAGGCATTCGTCGACGACGACGACCTACAG
TCATCGCTCGCGATTCAGCGGAAAGACGCTCTCAAGAAGCGCAAAAGGATCCGTCCAGAAGACTTCGCAAAACAA
CTCAAAGAGCAAGCTGAGGGGAAAGGAGACGAGGAAAGCGAAGACGAGAGCCAACAGGGCCTTGTCATCGGAGAG
ATATCGGAATTTGTAGCTACCCTCAGCAAACATGACGACGACGAACAGTCGAGGCTCAAACGACAACAAAGGGCG
GCAACAAGGCAAGCTGCGGAACCGGACACGCATGACCCAGACCAGCAAGACCAGCCAATGGACGATGCCCCCATC
CTCGAAAGCGGTGCCACGTCGCACGTCGACGAAGATGCGGCGACTGGCGGCGCCGAGGACAACAATCTCGACGAG
GAAAAAACAGTCGGTGAGAGCATGGGTGCAACCCTCGCCTTGCTTCGGGAGCGAGGTTTGATAGAGAAGTCGCGT
GGCGATCTCTCCCACCAAAGCAACCGAGAGCGACAAGAGTTCCTCAAGCGAAAGCTACAGCTTGAGGAAGAACTA
GACGAGAAGGCACGGCAGGCGCGAGAGCGGGACCGGGCGAGCGGCAAGTTGGAGCGCATGTCAAGGGCCGACAGG
GAAGAATACGCCAGGCAGCAGAACGCGTGGCGCGACCACCAGCACGCGCGCAAGATGGCCGAGCTCATCTCGTCC
ACCTACAAGCCCAACGTCGAACTGAAGTACACGGACGAGCACGGCCGGCGGCTCGACCGGAAGGAAGCCTTTAAG
CACCTGAGCCACCAATTCCACGGAAAGGGCAGCGGAAAGGGGAAGACGGAAAAGAAACTCAAGCAGATTGAAGAG
GAGAAGCGGCGCGAGGCTCAGAGTCTCTTCGACGCCAGCCAGGGCAGCGGCATGAACGCAGCCACGACGCAGCAG
ACCAAGAAGCGCAATGAGGCGGGCGTCCGTCTCGGATGA
Gene >Hirsu2|10761
ATGGATGCCGCAACTATTCAAGAGACCAACCGCATCCGGTTGTCTCTGGGCATGAAGCCGCTGCCCGTCCCTGGA
GCCCAACCCTCACAGCAGACAAACCGACGAGATGCCTCTGACAGCGATGACGATACCGAAGCTGCAAGCACATTG
GAAACACGACAGGCTCAGGCCTACGATAACTATAAAAGTCACCTGGAAGCCGAGGCCGCGAAAAAGAGACGAGAA
GCAAAGTCCGCTGCCATTCGAAAGGCCCGCGAGGCCGCCCAGCGCTTCGCCGTTCTCGAAGGCAAGGGACTAGGC
GAGCCTGAAGAGAGTGGCGAGGTTGATGCAAAGTCGTGGTTAACAGGGCAGAAGAAGCGTCAGAAGAAGATTGAA
AAGACCAGAAAGCTGGAGGAAGAGCTGGCGGCGGCAGAAGCGGCGGCGGCAGAAGCTGTCCAGTATACCTCCAAG
GATCTTGCGGGCATCAAAGTTTCGCACGACACCACCGCATTTGCAGAAGGAGATGAGCAGATTCTCACCCTCAAG
GACGCCACCATCGAAGAGTACGAGGAAGCGGGCGATGAGCTGGAAAATATCAACATCCGAGAGGGCGAGAAACTC
ACGGACAGACTAGAGCTGAAGAAGAAGCGGCCGGGCTATAATCCCCAAGACGATGAGATTGGAGGGCGCAGTATT
TTATCTCAGTACGATGATGAAATCTTCGGCAAGAAGTCGAAGAAGTTCACACTGGATGCGGATGGGGCCATCGCG
GAATTATCCGATATACTGGATCAACCAGTTCAAAAGACGAACAAACTACAGAACATCAGTTTGGACGATATCGTC
GGTAAGTACGCTCGGGATAGCGCGCCTCCCTCCGAGTCTAACTGGACCTATCCAGGCGATACCCCTACTTCTTCC
GACTACCTAGCGGCTTCTGAAATCAAAGTCAAGAAGCCGAAGAAGAAGAAGGGAAAGGGCACGAGGCAGAAACCG
CATGACGAAGACGATATCATCCCCACCGAAGCGGGTAGCAGTGCAATGGAGGTAGACACAAGCGGCCAGGTCGCC
AACAGAAAGCGGAAAGCAGTTACGGAGGCATTCGTCGACGACGACGACCTACAGTCATCGCTCGCGATTCAGCGG
AAAGACGCTCTCAAGAAGCGCAAAAGGATCCGTCCAGAAGACTTCGCAAAACAACTCAAAGAGCAAGCTGAGGGG
AAAGGAGACGAGGAAAGCGAAGACGAGAGCCAACAGGGCCTTGTCATCGGAGAGATATCGGAATTTGTAGCTACC
CTCAGCAAACATGACGACGACGAACAGTCGAGGCTCAAACGACAACAAAGGGCGGCAACAAGGCAAGCTGCGGAA
CCGGACACGCATGACCCAGACCAGCAAGACCAGCCAATGGACGATGCCCCCATCCTCGAAAGCGGTGCCACGTCG
CACGTCGACGAAGATGCGGCGACTGGCGGCGCCGAGGACAACAATCTCGACGAGGAAAAAACAGTCGGTGAGAGC
ATGGGTGCAACCCTCGCCTTGCTTCGGGAGCGAGGTTTGATAGAGAAGTCGCGTGGCGATCTCTCCCACCAAAGC
AACCGAGAGCGACAAGAGTTCCTCAAGCGAAAGCTACAGCTTGAGGAAGAACTAGACGAGAAGGCACGGCAGGCG
CGAGAGCGGGACCGGGCGAGCGGCAAGTTGGAGCGCATGTCAAGGGCCGACAGGGAAGAATACGCCAGGCAGCAG
AACGCGTGGCGCGACCACCAGCACGCGCGCAAGATGGCCGAGCTCATCTCGTCCACCTACAAGCCCAACGTCGAA
CTGAAGTACACGGACGAGCACGGCCGGCGGCTCGACCGGAAGGAAGCCTTTAAGCACCTGAGCCACCAATTCCAC
GGAAAGGGCAGCGGAAAGGGGAAGACGGAAAAGAAACTCAAGCAGATTGAAGAGGAGAAGCGGCGCGAGGCTCAG
AGTCTCTTCGACGCCAGCCAGGGCAGCGGCATGAACGCAGCCACGACGCAGCAGACCAAGAAGCGCAATGAGGCG
GGCGTCCGTCTCGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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