Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10758
Gene name
LocationContig_9:55059..55598
Strand-
Gene length (bp)539
Transcript length (bp)297
Coding sequence length (bp)297
Protein length (aa) 99

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.4424 0.5018 0.7023 0.0828 0.4452 0.3009 0.2649 0.1393 0.0922 0.044

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup264
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4823
Ophiocordyceps australis 1348a (Ghana) OphauG2|4824
Ophiocordyceps australis map64 (Brazil) OphauB2|3299
Ophiocordyceps australis map64 (Brazil) OphauB2|3300
Ophiocordyceps camponoti-floridani Ophcf2|06695
Ophiocordyceps camponoti-floridani Ophcf2|06696
Ophiocordyceps camponoti-rufipedis Ophun1|6321
Ophiocordyceps kimflemingae Ophio5|1555
Ophiocordyceps kimflemingae Ophio5|1556
Ophiocordyceps subramaniannii Hirsu2|10758 (this protein)
Ophiocordyceps subramaniannii Hirsu2|10759

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10758
MFAQLLANFALRLSSFLLITPRPPSTRFPTPPPISTNATATMPPKTSSIWENTSFLVDLAVVLHEAALHGGALTP
AVKGSMEESLRKQGYDTSWNAIR*
Coding >Hirsu2|10758
ATGTTTGCCCAGCTACTCGCCAACTTCGCTTTGCGTCTTTCCTCTTTTCTCCTCATCACGCCTCGGCCTCCGAGC
ACTCGCTTTCCCACTCCGCCGCCGATCTCGACGAACGCGACCGCCACCATGCCGCCCAAGACGTCCAGCATCTGG
GAGAACACGAGCTTCCTCGTCGACCTGGCCGTGGTCCTGCACGAGGCCGCGCTCCACGGCGGCGCTCTCACGCCC
GCCGTCAAGGGGTCGATGGAGGAGAGCCTTCGAAAGCAGGGCTACGATACAAGCTGGAACGCGATTCGGTAG
Transcript >Hirsu2|10758
ATGTTTGCCCAGCTACTCGCCAACTTCGCTTTGCGTCTTTCCTCTTTTCTCCTCATCACGCCTCGGCCTCCGAGC
ACTCGCTTTCCCACTCCGCCGCCGATCTCGACGAACGCGACCGCCACCATGCCGCCCAAGACGTCCAGCATCTGG
GAGAACACGAGCTTCCTCGTCGACCTGGCCGTGGTCCTGCACGAGGCCGCGCTCCACGGCGGCGCTCTCACGCCC
GCCGTCAAGGGGTCGATGGAGGAGAGCCTTCGAAAGCAGGGCTACGATACAAGCTGGAACGCGATTCGGTAG
Gene >Hirsu2|10758
ATGTTTGCCCAGGTAGGTAGGTAGGTCAAGAAGAATGGCTTGGTCTGTACCAACGTGCTACTTTTGCGCAAAGCA
CTGCCCACCTCTCAATCTACTATCAGGCAGGGCCTTAGCCTTGCAAACCCCATGTTGCCACCGCCAACCACCACC
AACCTCCCCTCCGCCAGCTGCCCTTCTCTGCCCTCTCTTCCTCTGCTCAGGTACCTTTGGCAAGGCATTCACGCC
ATCCACGCAGCGTAACTTGATAACCCCAGCTACTCGCCAACTTCGCTTTGCGTCTTTCCTCTTTTCTCCTCATCA
CGCCTCGGCCTCCGAGCACTCGCTTTCCCACTCCGCCGCCGATCTCGACGAACGCGACCGCCACCATGCCGCCCA
AGACGTCCAGCATCTGGGAGAACACGAGCTTCCTCGTCGACCTGGCCGTGGTCCTGCACGAGGCCGCGCTCCACG
GCGGCGCTCTCACGCCCGCCGTCAAGGGGTCGATGGAGGAGAGCCTTCGAAAGCAGGGCTACGATACAAGCTGGA
ACGCGATTCGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail