Protein ID | Hirsu2|1074 |
Gene name | |
Location | Contig_1221:2463..3960 |
Strand | - |
Gene length (bp) | 1497 |
Transcript length (bp) | 1395 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08645 | PNK3P | Polynucleotide kinase 3 phosphatase | 3.1E-55 | 87 | 266 |
PF13671 | AAA_33 | AAA domain | 3.5E-10 | 307 | 342 |
PF13671 | AAA_33 | AAA domain | 1.3E-12 | 346 | 433 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13911|PNK1_SCHPO | Bifunctional polynucleotide phosphatase/kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pnk1 PE=1 SV=2 | 90 | 459 | 4.0E-72 |
sp|Q96T60|PNKP_HUMAN | Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1 | 81 | 449 | 2.0E-58 |
sp|Q9JLV6|PNKP_MOUSE | Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus GN=Pnkp PE=1 SV=2 | 81 | 454 | 5.0E-58 |
sp|Q19683|YZR5_CAEEL | Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans GN=F21D5.5 PE=2 SV=2 | 85 | 448 | 3.0E-54 |
sp|Q5UQD2|PNKP_MIMIV | Putative bifunctional polynucleotide phosphatase/kinase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3 SV=1 | 87 | 461 | 3.0E-44 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13911|PNK1_SCHPO | Bifunctional polynucleotide phosphatase/kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pnk1 PE=1 SV=2 | 90 | 459 | 4.0E-72 |
sp|Q96T60|PNKP_HUMAN | Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1 | 81 | 449 | 2.0E-58 |
sp|Q9JLV6|PNKP_MOUSE | Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus GN=Pnkp PE=1 SV=2 | 81 | 454 | 5.0E-58 |
sp|Q19683|YZR5_CAEEL | Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans GN=F21D5.5 PE=2 SV=2 | 85 | 448 | 3.0E-54 |
sp|Q5UQD2|PNKP_MIMIV | Putative bifunctional polynucleotide phosphatase/kinase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3 SV=1 | 87 | 461 | 3.0E-44 |
sp|P21286|Y033_NPVAC | Uncharacterized 20.8 kDa protein in FGF-VUBI intergenic region OS=Autographa californica nuclear polyhedrosis virus PE=3 SV=2 | 85 | 266 | 7.0E-25 |
sp|Q84JE8|ZDP_ARATH | Polynucleotide 3'-phosphatase ZDP OS=Arabidopsis thaliana GN=ZDP PE=1 SV=1 | 79 | 267 | 6.0E-16 |
sp|Q9M041|BH140_ARATH | Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140 PE=3 SV=1 | 294 | 442 | 5.0E-09 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.1611 | 0.9269 | 0.1811 | 0.0108 | 0.3154 | 0.0028 | 0.0229 | 0.0157 | 0.0101 | 0.0438 |
Orthofinder run ID | 4 |
Orthogroup | 4829 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1074 MAPSSPSVQGKRPTSEAPASPPPPSKRALQSSTTKSAVANFFTPTSQKAKDRTSWSQRAHGEDLPATLLVGRYVP EGGEEGEPPRRKIAAFDLDSTLIDTSSGKKHASNAADWKWWDSCVPGRLRELYRDQGYRLVILSNQGGLTLHFDA GYKGPKASVQKRVTDFKQKCNAVLTNLDLPTTVYAATGHDIYRKPRTGMWKEVCEDYGISEHEVDLENSFFVGDA AGRLAVLGGDKAAAIAKDFSCSDRNLAHNIGIDFKTPEEFFLGQKPRDFHRDFDLAHYPFGDEAPLDGSPEPIFE TKNEQELVMFCGPPGAGKSTFYWKYLEPLSYERVNQDALKSRDKCVQTARDLLAEGSSVAVDNTNADPETRAIWV ELAKKAKVPIRCLWFKSPLHLCEHNDVVRALNRPLNPEARQGLPRLAFTGFASRFKEPKAQEGFQVVCEVQFRFR GTRDEYGVWARYWT* |
Coding | >Hirsu2|1074 ATGGCTCCGTCCAGCCCGTCCGTACAGGGAAAGCGACCGACGTCCGAGGCGCCCGCCTCCCCCCCGCCGCCGTCG AAGCGTGCGCTGCAGAGCAGCACGACGAAGAGCGCCGTCGCCAATTTCTTCACGCCGACGTCCCAGAAGGCCAAG GACCGCACGTCGTGGTCGCAGAGGGCCCATGGCGAGGACCTCCCGGCCACGCTCCTCGTCGGTCGCTACGTGCCC GAAGGCGGAGAGGAAGGGGAGCCTCCGCGCCGCAAGATCGCCGCCTTCGACCTCGACTCGACCCTCATCGACACC TCCTCGGGCAAGAAACACGCAAGCAACGCGGCCGACTGGAAGTGGTGGGACTCTTGCGTGCCCGGCCGGCTTCGC GAGCTGTACCGCGACCAGGGCTACCGGCTCGTCATCCTGTCCAACCAGGGCGGGCTGACGCTGCACTTCGACGCC GGCTACAAGGGCCCCAAGGCGTCGGTGCAGAAGCGCGTGACCGACTTCAAGCAGAAGTGTAACGCCGTCCTCACC AACCTGGACCTGCCGACGACCGTCTACGCGGCGACGGGCCACGACATATACAGGAAGCCGAGAACGGGCATGTGG AAGGAAGTCTGCGAAGACTACGGCATTTCCGAGCACGAGGTGGACCTGGAAAACAGCTTCTTTGTCGGCGACGCG GCCGGCCGACTTGCCGTCCTCGGCGGCGACAAGGCGGCGGCCATAGCCAAGGACTTTAGCTGCTCGGACAGGAAC CTTGCCCACAACATCGGCATCGACTTTAAGACGCCCGAGGAATTCTTCCTCGGACAGAAGCCGAGGGACTTTCAT CGCGACTTCGACCTCGCCCACTACCCGTTCGGCGATGAGGCACCCCTGGACGGGTCGCCGGAGCCGATCTTCGAG ACGAAGAACGAACAGGAGCTGGTCATGTTCTGCGGGCCCCCGGGGGCGGGCAAAAGCACCTTCTACTGGAAGTAC CTGGAGCCGCTGTCGTATGAGAGGGTCAATCAGGACGCACTCAAGAGCCGAGACAAGTGCGTCCAGACGGCCAGG GACCTGCTGGCCGAGGGCAGCTCGGTCGCCGTGGACAACACCAACGCAGACCCCGAGACGCGAGCGATATGGGTG GAGCTGGCCAAAAAGGCCAAGGTGCCGATCCGATGCCTGTGGTTCAAGTCACCGCTGCACCTGTGCGAGCACAAC GACGTCGTTCGCGCCCTCAACAGGCCGCTGAACCCCGAAGCGAGGCAGGGCCTGCCGAGGCTGGCGTTCACGGGC TTCGCCTCGCGCTTTAAGGAGCCCAAGGCGCAGGAGGGCTTCCAGGTCGTGTGCGAGGTGCAGTTCCGGTTCCGG GGCACGCGGGACGAGTACGGCGTGTGGGCGCGATATTGGACTTGA |
Transcript | >Hirsu2|1074 ATGGCTCCGTCCAGCCCGTCCGTACAGGGAAAGCGACCGACGTCCGAGGCGCCCGCCTCCCCCCCGCCGCCGTCG AAGCGTGCGCTGCAGAGCAGCACGACGAAGAGCGCCGTCGCCAATTTCTTCACGCCGACGTCCCAGAAGGCCAAG GACCGCACGTCGTGGTCGCAGAGGGCCCATGGCGAGGACCTCCCGGCCACGCTCCTCGTCGGTCGCTACGTGCCC GAAGGCGGAGAGGAAGGGGAGCCTCCGCGCCGCAAGATCGCCGCCTTCGACCTCGACTCGACCCTCATCGACACC TCCTCGGGCAAGAAACACGCAAGCAACGCGGCCGACTGGAAGTGGTGGGACTCTTGCGTGCCCGGCCGGCTTCGC GAGCTGTACCGCGACCAGGGCTACCGGCTCGTCATCCTGTCCAACCAGGGCGGGCTGACGCTGCACTTCGACGCC GGCTACAAGGGCCCCAAGGCGTCGGTGCAGAAGCGCGTGACCGACTTCAAGCAGAAGTGTAACGCCGTCCTCACC AACCTGGACCTGCCGACGACCGTCTACGCGGCGACGGGCCACGACATATACAGGAAGCCGAGAACGGGCATGTGG AAGGAAGTCTGCGAAGACTACGGCATTTCCGAGCACGAGGTGGACCTGGAAAACAGCTTCTTTGTCGGCGACGCG GCCGGCCGACTTGCCGTCCTCGGCGGCGACAAGGCGGCGGCCATAGCCAAGGACTTTAGCTGCTCGGACAGGAAC CTTGCCCACAACATCGGCATCGACTTTAAGACGCCCGAGGAATTCTTCCTCGGACAGAAGCCGAGGGACTTTCAT CGCGACTTCGACCTCGCCCACTACCCGTTCGGCGATGAGGCACCCCTGGACGGGTCGCCGGAGCCGATCTTCGAG ACGAAGAACGAACAGGAGCTGGTCATGTTCTGCGGGCCCCCGGGGGCGGGCAAAAGCACCTTCTACTGGAAGTAC CTGGAGCCGCTGTCGTATGAGAGGGTCAATCAGGACGCACTCAAGAGCCGAGACAAGTGCGTCCAGACGGCCAGG GACCTGCTGGCCGAGGGCAGCTCGGTCGCCGTGGACAACACCAACGCAGACCCCGAGACGCGAGCGATATGGGTG GAGCTGGCCAAAAAGGCCAAGGTGCCGATCCGATGCCTGTGGTTCAAGTCACCGCTGCACCTGTGCGAGCACAAC GACGTCGTTCGCGCCCTCAACAGGCCGCTGAACCCCGAAGCGAGGCAGGGCCTGCCGAGGCTGGCGTTCACGGGC TTCGCCTCGCGCTTTAAGGAGCCCAAGGCGCAGGAGGGCTTCCAGGTCGTGTGCGAGGTGCAGTTCCGGTTCCGG GGCACGCGGGACGAGTACGGCGTGTGGGCGCGATATTGGACTTGA |
Gene | >Hirsu2|1074 ATGGCTCCGTCCAGCCCGTCCGTACAGGGAAAGCGACCGACGTCCGAGGCGCCCGCCTCCCCCCCGCCGCCGTCG AAGCGTGCGCTGCAGAGCAGCACGACGAGTGTGTTCCTGGCTCCACGGCCGGCCAGTGCGTTGCTGCTGACGCTT CGTTCCAGAGAGCGCCGTCGCCAATTTCTTCACGCCGACGTCCCAGAAGGCCAAGGACCGCACGTCGTGGTCGCA GAGGGCCCATGGCGAGGACCTCCCGGCCACGCTCCTCGTCGGTCGCTACGTGCCCGAAGGCGGAGAGGAAGGGGA GCCTCCGCGCCGCAAGATCGCCGCCTTCGACCTCGACTCGACCCTCATCGACACCTCCTCGGGCAAGAAACACGC AAGCAACGCGGCCGACTGGAAGTGGTGGGACTCTTGCGTGCCCGGCCGGCTTCGCGAGCTGTACCGCGACCAGGG CTACCGGCTCGTCATCCTGTCCAACCAGGGCGGGCTGACGCTGCACTTCGACGCCGGCTACAAGGGCCCCAAGGC GTCGGTGCAGAAGCGCGTGACCGACTTCAAGCAGAAGTGTAACGCCGTCCTCACCAACCTGGACCTGCCGACGAC CGTCTACGCGGCGACGGGCCACGACATATACAGGAAGCCGAGAACGGGCATGTGGAAGGAAGTCTGCGAAGACTA CGGCATTTCCGAGCACGAGGTGGACCTGGAAAACAGCTTCTTTGTCGGCGACGCGGCCGGCCGACTTGCCGTCCT CGGCGGCGACAAGGCGGCGGCCATAGCCAAGGACTTTAGCTGCTCGGACAGGAACCTTGCCCACAACATCGGCAT CGACTTTAAGACGCCCGAGGAATTCTTCCTCGGACAGAAGCCGAGGGACTTTCATCGCGACTTCGACCTCGCCCA CTACCCGTTCGGCGATGAGGCACCCCTGGACGGGTCGCCGGAGCCGATCTTCGAGACGAAGAACGAACAGGAGCT GGTCATGTTCTGCGGGCCCCCGGGGGCGGGCAAAAGCACCTTCTACTGGAAGTACCTGGAGCCGCTGTCGTATGA GAGGGTCAATCAGGACGCACTCAAGAGCCGAGACAAGTGCGTCCAGACGGCCAGGGACCTGCTGGCCGAGGGCAG CTCGGTCGCCGTGGGTTCGTTGCCGTCTCCCGATACGCAAGACGAAACTGACAAGAGACAGACAACACCAACGCA GACCCCGAGACGCGAGCGATATGGGTGGAGCTGGCCAAAAAGGCCAAGGTGCCGATCCGATGCCTGTGGTTCAAG TCACCGCTGCACCTGTGCGAGCACAACGACGTCGTTCGCGCCCTCAACAGGCCGCTGAACCCCGAAGCGAGGCAG GGCCTGCCGAGGCTGGCGTTCACGGGCTTCGCCTCGCGCTTTAAGGAGCCCAAGGCGCAGGAGGGCTTCCAGGTC GTGTGCGAGGTGCAGTTCCGGTTCCGGGGCACGCGGGACGAGTACGGCGTGTGGGCGCGATATTGGACTTGA |