Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1073
Gene name
Location	Contig_1221:942..2082
Strand	+
Gene length (bp)	1140
Transcript length (bp)	1140
Coding sequence length (bp)	1140
Protein length (aa)	380

Overview

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm\|Nucleus		0.6141	0.58	0.3121	0.0786	0.1574	0.2382	0.1133	0.121	0.1438	0.0128

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	8576
Change Orthofinder run

Species	Protein ID
Ophiocordyceps subramaniannii	Hirsu2\|1073 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1073 MYVTSATACRNVSTEPYSNFSCDPAANAFTARLLPYPEASLSPALSLSLCLSPLRHRHAVLLDDQLGGEWRLNRP ATRVGAPERPAPSANLRSSAPPTPSRPPSIMAFRASNLQAGLEPERARPGSGAGSGQSTGGGTKGGLEENQPALG PLLTRRTCHFAPRITTPASAYQNKESVGQDLSPPYPGLGRVGERLREATKTKTKRKKKTCSPPPPPIRDSRDEIR GASVGEGRQRVSSEPFRRPLPMANSVFAHPPRRPSKSQAGETRPFGLPSQPAAESAVPPAAESFQPVDFASPRRS DAAAVAVDPGSRALAVRPSALAVRPSVRRSRARGIRPRGAGVVVARPPARPPAQGSGPPAASEPALAAMIGWAQS WMAR*
Coding	>Hirsu2\|1073 ATGTACGTGACCTCGGCCACTGCATGTCGCAACGTCAGCACCGAGCCGTACAGCAACTTTTCCTGTGACCCTGCA GCCAACGCCTTTACCGCTCGCCTCCTCCCGTACCCAGAAGCCTCTCTCTCGCCCGCTCTCTCTCTCTCTCTCTGT CTCTCTCCCCTCCGGCACCGGCACGCTGTCTTGCTCGACGACCAGCTCGGAGGCGAGTGGCGCCTGAACCGCCCC GCCACCCGAGTGGGGGCTCCGGAGAGGCCAGCGCCCTCGGCCAACCTCCGATCCTCGGCTCCTCCGACTCCCAGC CGTCCACCGTCCATCATGGCCTTTCGGGCTTCAAACCTTCAGGCCGGCCTCGAACCGGAGCGGGCGCGCCCAGGG TCCGGGGCCGGGTCAGGCCAATCGACGGGAGGGGGGACGAAGGGGGGACTGGAGGAGAATCAGCCCGCTTTGGGC CCTCTTCTTACAAGGCGAACGTGCCACTTTGCGCCTCGTATCACAACACCTGCGTCCGCTTACCAGAACAAGGAG TCAGTCGGCCAGGATTTATCGCCGCCATATCCCGGCCTCGGCCGCGTGGGGGAAAGGCTTCGAGAAGCCACGAAG ACAAAAACAAAACGAAAAAAAAAAACTTGCTCTCCTCCCCCACCCCCGATCCGCGACTCCCGAGACGAAATCCGG GGAGCCTCTGTGGGGGAAGGGCGGCAGCGAGTCAGTAGCGAGCCATTTCGCAGGCCGTTGCCAATGGCCAATTCC GTATTCGCCCATCCGCCCCGTCGTCCATCAAAGAGCCAGGCCGGCGAGACTCGGCCTTTCGGGCTCCCCTCGCAG CCTGCCGCCGAATCAGCCGTTCCGCCAGCGGCTGAATCCTTCCAGCCAGTAGACTTTGCGTCGCCGCGTCGATCG GACGCCGCAGCAGTAGCAGTCGATCCTGGCAGCCGTGCCCTGGCTGTCCGTCCGTCTGCCCTGGCTGTCCGTCCG TCTGTTCGCCGATCCCGTGCGCGAGGAATCCGGCCCCGGGGAGCAGGCGTCGTCGTCGCCCGCCCGCCCGCCCGC CCGCCCGCTCAAGGTTCGGGTCCGCCTGCAGCCTCAGAGCCTGCGCTTGCGGCCATGATAGGATGGGCGCAATCG TGGATGGCGAGATGA
Transcript	>Hirsu2\|1073 ATGTACGTGACCTCGGCCACTGCATGTCGCAACGTCAGCACCGAGCCGTACAGCAACTTTTCCTGTGACCCTGCA GCCAACGCCTTTACCGCTCGCCTCCTCCCGTACCCAGAAGCCTCTCTCTCGCCCGCTCTCTCTCTCTCTCTCTGT CTCTCTCCCCTCCGGCACCGGCACGCTGTCTTGCTCGACGACCAGCTCGGAGGCGAGTGGCGCCTGAACCGCCCC GCCACCCGAGTGGGGGCTCCGGAGAGGCCAGCGCCCTCGGCCAACCTCCGATCCTCGGCTCCTCCGACTCCCAGC CGTCCACCGTCCATCATGGCCTTTCGGGCTTCAAACCTTCAGGCCGGCCTCGAACCGGAGCGGGCGCGCCCAGGG TCCGGGGCCGGGTCAGGCCAATCGACGGGAGGGGGGACGAAGGGGGGACTGGAGGAGAATCAGCCCGCTTTGGGC CCTCTTCTTACAAGGCGAACGTGCCACTTTGCGCCTCGTATCACAACACCTGCGTCCGCTTACCAGAACAAGGAG TCAGTCGGCCAGGATTTATCGCCGCCATATCCCGGCCTCGGCCGCGTGGGGGAAAGGCTTCGAGAAGCCACGAAG ACAAAAACAAAACGAAAAAAAAAAACTTGCTCTCCTCCCCCACCCCCGATCCGCGACTCCCGAGACGAAATCCGG GGAGCCTCTGTGGGGGAAGGGCGGCAGCGAGTCAGTAGCGAGCCATTTCGCAGGCCGTTGCCAATGGCCAATTCC GTATTCGCCCATCCGCCCCGTCGTCCATCAAAGAGCCAGGCCGGCGAGACTCGGCCTTTCGGGCTCCCCTCGCAG CCTGCCGCCGAATCAGCCGTTCCGCCAGCGGCTGAATCCTTCCAGCCAGTAGACTTTGCGTCGCCGCGTCGATCG GACGCCGCAGCAGTAGCAGTCGATCCTGGCAGCCGTGCCCTGGCTGTCCGTCCGTCTGCCCTGGCTGTCCGTCCG TCTGTTCGCCGATCCCGTGCGCGAGGAATCCGGCCCCGGGGAGCAGGCGTCGTCGTCGCCCGCCCGCCCGCCCGC CCGCCCGCTCAAGGTTCGGGTCCGCCTGCAGCCTCAGAGCCTGCGCTTGCGGCCATGATAGGATGGGCGCAATCG TGGATGGCGAGATGA
Gene	>Hirsu2\|1073 ATGTACGTGACCTCGGCCACTGCATGTCGCAACGTCAGCACCGAGCCGTACAGCAACTTTTCCTGTGACCCTGCA GCCAACGCCTTTACCGCTCGCCTCCTCCCGTACCCAGAAGCCTCTCTCTCGCCCGCTCTCTCTCTCTCTCTCTGT CTCTCTCCCCTCCGGCACCGGCACGCTGTCTTGCTCGACGACCAGCTCGGAGGCGAGTGGCGCCTGAACCGCCCC GCCACCCGAGTGGGGGCTCCGGAGAGGCCAGCGCCCTCGGCCAACCTCCGATCCTCGGCTCCTCCGACTCCCAGC CGTCCACCGTCCATCATGGCCTTTCGGGCTTCAAACCTTCAGGCCGGCCTCGAACCGGAGCGGGCGCGCCCAGGG TCCGGGGCCGGGTCAGGCCAATCGACGGGAGGGGGGACGAAGGGGGGACTGGAGGAGAATCAGCCCGCTTTGGGC CCTCTTCTTACAAGGCGAACGTGCCACTTTGCGCCTCGTATCACAACACCTGCGTCCGCTTACCAGAACAAGGAG TCAGTCGGCCAGGATTTATCGCCGCCATATCCCGGCCTCGGCCGCGTGGGGGAAAGGCTTCGAGAAGCCACGAAG ACAAAAACAAAACGAAAAAAAAAAACTTGCTCTCCTCCCCCACCCCCGATCCGCGACTCCCGAGACGAAATCCGG GGAGCCTCTGTGGGGGAAGGGCGGCAGCGAGTCAGTAGCGAGCCATTTCGCAGGCCGTTGCCAATGGCCAATTCC GTATTCGCCCATCCGCCCCGTCGTCCATCAAAGAGCCAGGCCGGCGAGACTCGGCCTTTCGGGCTCCCCTCGCAG CCTGCCGCCGAATCAGCCGTTCCGCCAGCGGCTGAATCCTTCCAGCCAGTAGACTTTGCGTCGCCGCGTCGATCG GACGCCGCAGCAGTAGCAGTCGATCCTGGCAGCCGTGCCCTGGCTGTCCGTCCGTCTGCCCTGGCTGTCCGTCCG TCTGTTCGCCGATCCCGTGCGCGAGGAATCCGGCCCCGGGGAGCAGGCGTCGTCGTCGCCCGCCCGCCCGCCCGC CCGCCCGCTCAAGGTTCGGGTCCGCCTGCAGCCTCAGAGCCTGCGCTTGCGGCCATGATAGGATGGGCGCAATCG TGGATGGCGAGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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